RNA–Protein interactions for RNA: YOR193W

PEX27, Transcript of Peripheral peroxisomal membrane protein, yeastyeast

Gene PEX27, Length 1,131 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX27YOR193W YGR018CP53211 109 aa2.86□□□□□ -1.95
PEX27YOR193W CLD1P53264 445 aa2.86□□□□□ -1.95
PEX27YOR193W PRP3Q03338 469 aaPredicted RBP2.86□□□□□ -1.95
PEX27YOR193W SPE3Q12074 293 aaKnown RBP2.86□□□□□ -1.95
PEX27YOR193W MSI1P13712 422 aa2.85□□□□□ -1.95
PEX27YOR193W EXG1P23776 448 aaKnown RBP2.85□□□□□ -1.95
PEX27YOR193W YEF1P32622 495 aa2.85□□□□□ -1.95
PEX27YOR193W RAD5P32849 1169 aaPredicted RBP2.85□□□□□ -1.95
PEX27YOR193W LRP1P38801 184 aaKnown RBP2.85□□□□□ -1.95
PEX27YOR193W SBE22P38814 852 aa2.85□□□□□ -1.95
PEX27YOR193W FAD1P38913 306 aa2.85□□□□□ -1.95
PEX27YOR193W PAC11P40960 533 aa2.85□□□□□ -1.95
PEX27YOR193W YGR117CP53270 476 aa2.85□□□□□ -1.95
PEX27YOR193W MKC7P53379 596 aa2.85□□□□□ -1.95
PEX27YOR193W SPR6Q01684 191 aa2.85□□□□□ -1.95
PEX27YOR193W YDR541CQ03049 344 aa2.85□□□□□ -1.95
PEX27YOR193W GYL1Q04322 720 aa2.85□□□□□ -1.95
PEX27YOR193W RTN1Q04947 295 aaKnown RBP2.85□□□□□ -1.95
PEX27YOR193W NDL1Q06568 189 aa2.85□□□□□ -1.95
PEX27YOR193W EAF3Q12432 401 aa2.85□□□□□ -1.95
PEX27YOR193W PAB1P04147 577 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
PEX27YOR193W ARF1P11076 181 aaKnown RBP2.84□□□□□ -1.95
PEX27YOR193W CAP2P13517 287 aa2.84□□□□□ -1.95
PEX27YOR193W SLM5P25345 492 aaKnown RBP2.84□□□□□ -1.95
PEX27YOR193W PHO91P27514 894 aa2.84□□□□□ -1.95
PEX27YOR193W DOA1P36037 715 aa2.84□□□□□ -1.95
PEX27YOR193W GDT1P38301 280 aaPredicted RBP2.84□□□□□ -1.95
PEX27YOR193W YJL055WP47044 245 aa2.84□□□□□ -1.95
PEX27YOR193W FLC3P53121 802 aa2.84□□□□□ -1.95
PEX27YOR193W RRP46P53256 223 aaPredicted RBP2.84□□□□□ -1.95
PEX27YOR193W RIF2Q06208 395 aa2.84□□□□□ -1.95
PEX27YOR193W POM152P39685 1337 aa2.84□□□□□ -1.96
PEX27YOR193W ADH1P00330 348 aaKnown RBP2.83□□□□□ -1.96
PEX27YOR193W COX4P04037 155 aa2.83□□□□□ -1.96
PEX27YOR193W CBP6P07253 162 aaPredicted RBP2.83□□□□□ -1.96
PEX27YOR193W AAT2P23542 418 aaKnown RBP2.83□□□□□ -1.96
PEX27YOR193W NRP1P32770 719 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
PEX27YOR193W GDI1P39958 451 aaKnown RBP2.83□□□□□ -1.96
PEX27YOR193W ATM1P40416 690 aa2.83□□□□□ -1.96
PEX27YOR193W PGU1P47180 361 aa2.83□□□□□ -1.96
PEX27YOR193W MST27P53176 234 aa2.83□□□□□ -1.96
PEX27YOR193W LIP2Q06005 328 aa2.83□□□□□ -1.96
PEX27YOR193W RPN5Q12250 445 aaKnown RBP2.83□□□□□ -1.96
PEX27YOR193W RPL1AP0CX43 217 aaKnown RBP2.82□□□□□ -1.96
PEX27YOR193W RPL1BP0CX44 217 aaKnown RBP2.82□□□□□ -1.96
PEX27YOR193W IES6P32617 166 aa2.82□□□□□ -1.96
PEX27YOR193W MCR1P36060 302 aaKnown RBP2.82□□□□□ -1.96
PEX27YOR193W KAP104P38217 918 aaKnown RBP2.82□□□□□ -1.96
PEX27YOR193W BAT1P38891 393 aaKnown RBP2.82□□□□□ -1.96
PEX27YOR193W AIP1P46680 615 aaKnown RBP2.82□□□□□ -1.96
PEX27YOR193W BIR1P47134 954 aa2.82□□□□□ -1.96
PEX27YOR193W STE24P47154 453 aa2.82□□□□□ -1.96
PEX27YOR193W CRH1P53301 507 aa2.82□□□□□ -1.96
PEX27YOR193W AAD15Q08361 143 aa2.82□□□□□ -1.96
PEX27YOR193W YOP1Q12402 180 aa2.82□□□□□ -1.96
PEX27YOR193W SRN2Q99176 213 aa2.82□□□□□ -1.96
PEX27YOR193W RPL12AP0CX53 165 aaKnown RBP2.81□□□□□ -1.96
PEX27YOR193W RPL12BP0CX54 165 aa2.81□□□□□ -1.96
PEX27YOR193W MNE1P24720 663 aa2.81□□□□□ -1.96
PEX27YOR193W MDL1P33310 695 aa2.81□□□□□ -1.96
PEX27YOR193W QDR3P38227 689 aa2.81□□□□□ -1.96
PEX27YOR193W YNL208WP40159 199 aaKnown RBP2.81□□□□□ -1.96
PEX27YOR193W PFS2P42841 465 aaKnown RBP2.81□□□□□ -1.96
PEX27YOR193W LCB3P47013 409 aa2.81□□□□□ -1.96
PEX27YOR193W ASN2P49090 572 aaKnown RBP2.81□□□□□ -1.96
PEX27YOR193W RTT102P53330 157 aa2.81□□□□□ -1.96
PEX27YOR193W TRM112P53738 135 aaPredicted RBP2.81□□□□□ -1.96
PEX27YOR193W YDL114WQ07530 308 aa2.81□□□□□ -1.96
PEX27YOR193W RPL6BP05739 176 aaKnown RBP2.8□□□□□ -1.96
PEX27YOR193W TPK3P05986 398 aa2.8□□□□□ -1.96
PEX27YOR193W DPH5P32469 300 aaPredicted RBP2.8□□□□□ -1.96
PEX27YOR193W YBL028CP38202 106 aa2.8□□□□□ -1.96
PEX27YOR193W YHK8P38776 514 aa2.8□□□□□ -1.96
PEX27YOR193W GPI16P38875 610 aa2.8□□□□□ -1.96
PEX27YOR193W ROG1P53118 685 aa2.8□□□□□ -1.96
PEX27YOR193W RSC1P53236 928 aa2.8□□□□□ -1.96
PEX27YOR193W COS1P53822 381 aa2.8□□□□□ -1.96
PEX27YOR193W RPL6AQ02326 176 aaKnown RBP2.8□□□□□ -1.96
PEX27YOR193W URC2Q04411 772 aa2.8□□□□□ -1.96
PEX27YOR193W SMF3Q12078 473 aaPredicted RBP2.8□□□□□ -1.96
PEX27YOR193W RNH203Q12338 110 aa2.8□□□□□ -1.96
PEX27YOR193W MEX67Q99257 599 aaKnown RBP2.8□□□□□ -1.96
PEX27YOR193W YSC83P32792 385 aa2.79□□□□□ -1.96
PEX27YOR193W DTR1P38125 572 aa2.79□□□□□ -1.96
PEX27YOR193W STP2P38704 541 aa2.79□□□□□ -1.96
PEX27YOR193W ALD5P40047 520 aaKnown RBP2.79□□□□□ -1.96
PEX27YOR193W JEM1P40358 645 aa2.79□□□□□ -1.96
PEX27YOR193W LCB2P40970 561 aa2.79□□□□□ -1.96
PEX27YOR193W MLC1P53141 149 aa2.79□□□□□ -1.96
PEX27YOR193W YMR010WQ03687 405 aa2.79□□□□□ -1.96
PEX27YOR193W ECM7Q06200 448 aa2.79□□□□□ -1.96
PEX27YOR193W IPK1Q06667 281 aa2.79□□□□□ -1.96
PEX27YOR193W PAR32Q12515 295 aaKnown RBP2.79□□□□□ -1.96
PEX27YOR193W HSP82P02829 709 aaKnown RBP2.78□□□□□ -1.96
PEX27YOR193W SSC1P0CS90 654 aaKnown RBP2.78□□□□□ -1.96
PEX27YOR193W OXA1P39952 402 aa2.78□□□□□ -1.96
PEX27YOR193W BNS1P50084 137 aa2.78□□□□□ -1.96
PEX27YOR193W ATP22P50273 684 aaPredicted RBP2.78□□□□□ -1.96
PEX27YOR193W ERO1Q03103 563 aa2.78□□□□□ -1.96
PEX27YOR193W TDA1Q03533 586 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms