RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W NOP13P53883 403 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
ROT1YMR200W GIM5Q04493 163 aa4.54□□□□□ -1.68
ROT1YMR200W AIM33Q04516 312 aa4.54□□□□□ -1.68
ROT1YMR200W RNH203Q12338 110 aa4.54□□□□□ -1.68
ROT1YMR200W BRR1Q99177 341 aaPredicted RBP4.54□□□□□ -1.68
ROT1YMR200W RGS2Q99188 309 aa4.54□□□□□ -1.68
ROT1YMR200W RAD9P14737 1309 aa4.53□□□□□ -1.68
ROT1YMR200W COX2P00410 251 aa4.53□□□□□ -1.68
ROT1YMR200W OPI3P05375 206 aa4.53□□□□□ -1.68
ROT1YMR200W RPL7AP05737 244 aaKnown RBP4.53□□□□□ -1.68
ROT1YMR200W RAD7P06779 565 aa4.53□□□□□ -1.68
ROT1YMR200W DST1P07273 309 aa4.53□□□□□ -1.68
ROT1YMR200W CHO1P08456 276 aa4.53□□□□□ -1.68
ROT1YMR200W RPS16AP0CX51 143 aaKnown RBP4.53□□□□□ -1.68
ROT1YMR200W RPS16BP0CX52 143 aaKnown RBP4.53□□□□□ -1.68
ROT1YMR200W MET16P18408 261 aaPredicted RBP4.53□□□□□ -1.68
ROT1YMR200W ZRC1P20107 442 aa4.53□□□□□ -1.68
ROT1YMR200W ACH1P32316 526 aa4.53□□□□□ -1.68
ROT1YMR200W PTR2P32901 601 aa4.53□□□□□ -1.68
ROT1YMR200W COS9P36034 407 aa4.53□□□□□ -1.68
ROT1YMR200W LDB7P38210 180 aa4.53□□□□□ -1.68
ROT1YMR200W YPS6P40583 537 aa4.53□□□□□ -1.68
ROT1YMR200W YAR1P46683 200 aa4.53□□□□□ -1.68
ROT1YMR200W MRX5P47007 382 aa4.53□□□□□ -1.68
ROT1YMR200W YGR168CP53293 376 aa4.53□□□□□ -1.68
ROT1YMR200W MRPL50P53724 139 aa4.53□□□□□ -1.68
ROT1YMR200W CUS2P53830 285 aaPredicted RBP4.53□□□□□ -1.68
ROT1YMR200W RPM2Q02773 1202 aa4.53□□□□□ -1.68
ROT1YMR200W IZH1Q03419 316 aa4.53□□□□□ -1.68
ROT1YMR200W GRS2Q06817 618 aa4.53□□□□□ -1.68
ROT1YMR200W CMS1Q07897 291 aaKnown RBP4.53□□□□□ -1.68
ROT1YMR200W DSE3Q08729 430 aa4.53□□□□□ -1.68
ROT1YMR200W SLF1Q12034 447 aaKnown RBP4.53□□□□□ -1.68
ROT1YMR200W RPL7BQ12213 244 aaKnown RBP4.53□□□□□ -1.68
ROT1YMR200W YPT1P01123 206 aaKnown RBP4.52□□□□□ -1.69
ROT1YMR200W RHO1P06780 209 aaKnown RBP4.52□□□□□ -1.69
ROT1YMR200W MRP2P10663 115 aaPredicted RBP4.52□□□□□ -1.69
ROT1YMR200W FRS2P15625 503 aaKnown RBP4.52□□□□□ -1.69
ROT1YMR200W CKA2P19454 339 aa4.52□□□□□ -1.69
ROT1YMR200W RPL24BP24000 155 aaKnown RBP4.52□□□□□ -1.69
ROT1YMR200W RAD57P25301 460 aa4.52□□□□□ -1.69
ROT1YMR200W SLM5P25345 492 aaKnown RBP4.52□□□□□ -1.69
ROT1YMR200W MRPL9P31334 269 aa4.52□□□□□ -1.69
ROT1YMR200W GDH2P33327 1092 aaKnown RBP4.52□□□□□ -1.69
ROT1YMR200W MSN2P33748 704 aa4.52□□□□□ -1.69
ROT1YMR200W SMF2P38778 549 aa4.52□□□□□ -1.69
ROT1YMR200W BIG1P38813 335 aa4.52□□□□□ -1.69
ROT1YMR200W CCT2P39076 527 aaKnown RBP4.52□□□□□ -1.69
ROT1YMR200W MTW1P39731 289 aa4.52□□□□□ -1.69
ROT1YMR200W YIF1P53845 314 aaKnown RBP4.52□□□□□ -1.69
ROT1YMR200W RRP17Q04031 235 aaPredicted RBP4.52□□□□□ -1.69
ROT1YMR200W SMP3Q04174 516 aa4.52□□□□□ -1.69
ROT1YMR200W HSP31Q04432 237 aa4.52□□□□□ -1.69
ROT1YMR200W YMR226CQ05016 267 aaKnown RBP4.52□□□□□ -1.69
ROT1YMR200W GMC2Q06201 188 aa4.52□□□□□ -1.69
ROT1YMR200W ARR2Q06597 130 aa4.52□□□□□ -1.69
ROT1YMR200W YOL075CQ08234 1294 aa4.52□□□□□ -1.69
ROT1YMR200W YPR022CQ12139 1133 aa4.52□□□□□ -1.69
ROT1YMR200W AHA1Q12449 350 aaKnown RBP4.52□□□□□ -1.69
ROT1YMR200W SEC3P33332 1336 aaKnown RBP4.51□□□□□ -1.69
ROT1YMR200W ADH2P00331 348 aaKnown RBP4.51□□□□□ -1.69
ROT1YMR200W CDC33P07260 213 aaKnown RBP4.51□□□□□ -1.69
ROT1YMR200W AQY1P0CD91 305 aa4.51□□□□□ -1.69
ROT1YMR200W MATALPHA2P0CY08 210 aa4.51□□□□□ -1.69
ROT1YMR200W HMLALPHA2P0CY09 210 aa4.51□□□□□ -1.69
ROT1YMR200W TYR1P20049 452 aa4.51□□□□□ -1.69
ROT1YMR200W TKL1P23254 680 aaKnown RBP4.51□□□□□ -1.69
ROT1YMR200W GCG1P32656 232 aaKnown RBP4.51□□□□□ -1.69
ROT1YMR200W CBP4P37267 147 aa4.51□□□□□ -1.69
ROT1YMR200W PFS1P38872 237 aa4.51□□□□□ -1.69
ROT1YMR200W EGD2P38879 174 aaKnown RBP4.51□□□□□ -1.69
ROT1YMR200W SYG1P40528 902 aa4.51□□□□□ -1.69
ROT1YMR200W GLG2P47011 380 aa4.51□□□□□ -1.69
ROT1YMR200W PMT5P52867 743 aa4.51□□□□□ -1.69
ROT1YMR200W YTP1P53584 459 aa4.51□□□□□ -1.69
ROT1YMR200W YPL068CQ02749 293 aa4.51□□□□□ -1.69
ROT1YMR200W GIP3Q03016 1276 aa4.51□□□□□ -1.69
ROT1YMR200W NUP53Q03790 475 aa4.51□□□□□ -1.69
ROT1YMR200W GFD1Q04839 188 aaKnown RBP4.51□□□□□ -1.69
ROT1YMR200W HRD3Q05787 833 aa4.51□□□□□ -1.69
ROT1YMR200W VIK1Q12045 647 aa4.51□□□□□ -1.69
ROT1YMR200W DAP1Q12091 152 aa4.51□□□□□ -1.69
ROT1YMR200W YLR049CQ12110 428 aa4.51□□□□□ -1.69
ROT1YMR200W YRA1Q12159 226 aaKnown RBP4.51□□□□□ -1.69
ROT1YMR200W RGT2Q12300 763 aa4.51□□□□□ -1.69
ROT1YMR200W RPL12AP0CX53 165 aaKnown RBP4.5□□□□□ -1.69
ROT1YMR200W RPL12BP0CX54 165 aa4.5□□□□□ -1.69
ROT1YMR200W WHI2P12611 486 aa4.5□□□□□ -1.69
ROT1YMR200W CLN3P13365 580 aa4.5□□□□□ -1.69
ROT1YMR200W CKI1P20485 582 aa4.5□□□□□ -1.69
ROT1YMR200W RRT12P25381 491 aa4.5□□□□□ -1.69
ROT1YMR200W RPS5P26783 225 aaKnown RBP4.5□□□□□ -1.69
ROT1YMR200W FUN19P28003 413 aaPredicted RBP4.5□□□□□ -1.69
ROT1YMR200W SAC1P32368 623 aaKnown RBP4.5□□□□□ -1.69
ROT1YMR200W DOA1P36037 715 aa4.5□□□□□ -1.69
ROT1YMR200W YKL162CP36052 402 aa4.5□□□□□ -1.69
ROT1YMR200W YPK3P38070 525 aa4.5□□□□□ -1.69
ROT1YMR200W HIS2P38635 335 aa4.5□□□□□ -1.69
ROT1YMR200W YMR134WP40207 237 aa4.5□□□□□ -1.69
ROT1YMR200W BTT1P40314 149 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms