RNA–Protein interactions for RNA: YMR106C

YKU80, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeastyeast

Gene YKU80, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKU80YMR106C SUI1P32911 108 aaKnown RBP2.39□□□□□ -2.03
YKU80YMR106C VAM7P32912 316 aa2.39□□□□□ -2.03
YKU80YMR106C SKT5P34226 696 aa2.39□□□□□ -2.03
YKU80YMR106C TAF14P35189 244 aa2.39□□□□□ -2.03
YKU80YMR106C UPS2P35200 230 aa2.39□□□□□ -2.03
YKU80YMR106C AUR1P36107 401 aaPredicted RBP2.39□□□□□ -2.03
YKU80YMR106C YKR051WP36142 418 aa2.39□□□□□ -2.03
YKU80YMR106C HEK2P38199 381 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
YKU80YMR106C DER1P38307 211 aa2.39□□□□□ -2.03
YKU80YMR106C YBP1P38315 674 aa2.39□□□□□ -2.03
YKU80YMR106C SDH8P38345 138 aa2.39□□□□□ -2.03
YKU80YMR106C ERG7P38604 731 aa2.39□□□□□ -2.03
YKU80YMR106C FAD1P38913 306 aa2.39□□□□□ -2.03
YKU80YMR106C CCT6P39079 546 aa2.39□□□□□ -2.03
YKU80YMR106C SEO1P39709 593 aa2.39□□□□□ -2.03
YKU80YMR106C YER130CP39959 443 aa2.39□□□□□ -2.03
YKU80YMR106C ECM10P39987 644 aa2.39□□□□□ -2.03
YKU80YMR106C FCY21P40039 528 aa2.39□□□□□ -2.03
YKU80YMR106C SGN1P40561 250 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
YKU80YMR106C HXT9P40885 567 aa2.39□□□□□ -2.03
YKU80YMR106C YGR201CP42936 225 aa2.39□□□□□ -2.03
YKU80YMR106C TDA10P42938 290 aa2.39□□□□□ -2.03
YKU80YMR106C PRM10P42946 383 aa2.39□□□□□ -2.03
YKU80YMR106C YJL107CP42947 387 aa2.39□□□□□ -2.03
YKU80YMR106C DPB11P47027 764 aaPredicted RBP2.39□□□□□ -2.03
YKU80YMR106C TAH11P47112 604 aa2.39□□□□□ -2.03
YKU80YMR106C RFX1P48743 811 aa2.39□□□□□ -2.03
YKU80YMR106C GET1P53192 235 aa2.39□□□□□ -2.03
YKU80YMR106C GPI1P53306 609 aa2.39□□□□□ -2.03
YKU80YMR106C CSL4P53859 292 aaPredicted RBP2.39□□□□□ -2.03
YKU80YMR106C INN1P53901 409 aa2.39□□□□□ -2.03
YKU80YMR106C HXT11P54862 567 aa2.39□□□□□ -2.03
YKU80YMR106C TMA20P89886 181 aaPredicted RBP2.39□□□□□ -2.03
YKU80YMR106C YPL080CQ02826 108 aa2.39□□□□□ -2.03
YKU80YMR106C TY2A-DR2Q03483 438 aa2.39□□□□□ -2.03
YKU80YMR106C ACL4Q03771 387 aa2.39□□□□□ -2.03
YKU80YMR106C SNX41Q04053 625 aa2.39□□□□□ -2.03
YKU80YMR106C GLO2Q05584 274 aa2.39□□□□□ -2.03
YKU80YMR106C ADY4Q05955 493 aa2.39□□□□□ -2.03
YKU80YMR106C TMS1Q12116 473 aa2.39□□□□□ -2.03
YKU80YMR106C YPL150WQ12152 901 aa2.39□□□□□ -2.03
YKU80YMR106C FYV7Q12247 151 aa2.39□□□□□ -2.03
YKU80YMR106C TY2A-BQ12260 438 aa2.39□□□□□ -2.03
YKU80YMR106C TY2A-OR2Q12293 438 aa2.39□□□□□ -2.03
YKU80YMR106C TY2A-DR1Q12392 438 aa2.39□□□□□ -2.03
YKU80YMR106C TY2A-OR1Q12439 438 aa2.39□□□□□ -2.03
YKU80YMR106C AGC1Q12482 902 aa2.39□□□□□ -2.03
YKU80YMR106C TY2A-DR3Q99303 438 aa2.39□□□□□ -2.03
YKU80YMR106C MDS3P53094 1487 aa2.39□□□□□ -2.03
YKU80YMR106C STH1P32597 1359 aa2.38□□□□□ -2.03
YKU80YMR106C EDE1P34216 1381 aa2.38□□□□□ -2.03
YKU80YMR106C HTB1P02293 131 aaKnown RBP2.38□□□□□ -2.03
YKU80YMR106C HTB2P02294 131 aa2.38□□□□□ -2.03
YKU80YMR106C HMG2P12684 1045 aa2.38□□□□□ -2.03
YKU80YMR106C VPS33P20795 691 aa2.38□□□□□ -2.03
YKU80YMR106C ERG8P24521 451 aa2.38□□□□□ -2.03
YKU80YMR106C IFM1P25038 676 aa2.38□□□□□ -2.03
YKU80YMR106C GSY2P27472 705 aa2.38□□□□□ -2.03
YKU80YMR106C HRR25P29295 494 aaKnown RBP2.38□□□□□ -2.03
YKU80YMR106C HXT3P32466 567 aaKnown RBP2.38□□□□□ -2.03
YKU80YMR106C CDC13P32797 924 aaKnown RBP2.38□□□□□ -2.03
YKU80YMR106C GSP1P32835 219 aaKnown RBP2.38□□□□□ -2.03
YKU80YMR106C GSP2P32836 220 aaKnown RBP2.38□□□□□ -2.03
YKU80YMR106C SKG6P32900 734 aaPredicted RBP2.38□□□□□ -2.03
YKU80YMR106C PDR3P33200 976 aa2.38□□□□□ -2.03
YKU80YMR106C RPS1AP33442 255 aaKnown RBP2.38□□□□□ -2.03
YKU80YMR106C RPC25P35718 212 aa2.38□□□□□ -2.03
YKU80YMR106C MYO3P36006 1272 aa2.38□□□□□ -2.03
YKU80YMR106C SHE3P38272 425 aaKnown RBP2.38□□□□□ -2.03
YKU80YMR106C TSC10P38342 320 aa2.38□□□□□ -2.03
YKU80YMR106C SBE22P38814 852 aa2.38□□□□□ -2.03
YKU80YMR106C LSM12P38828 187 aaKnown RBP2.38□□□□□ -2.03
YKU80YMR106C SRP14P38985 146 aa2.38□□□□□ -2.03
YKU80YMR106C NUP60P39705 539 aa2.38□□□□□ -2.03
YKU80YMR106C BDH1P39714 382 aa2.38□□□□□ -2.03
YKU80YMR106C RMD6P39975 231 aa2.38□□□□□ -2.03
YKU80YMR106C ERG28P40030 148 aa2.38□□□□□ -2.03
YKU80YMR106C RGI1P40043 161 aaPredicted RBP2.38□□□□□ -2.03
YKU80YMR106C SNL1P40548 159 aa2.38□□□□□ -2.03
YKU80YMR106C IME4P41833 600 aa2.38□□□□□ -2.03
YKU80YMR106C MOG1P47123 218 aa2.38□□□□□ -2.03
YKU80YMR106C YGR149WP48236 432 aa2.38□□□□□ -2.03
YKU80YMR106C PHO23P50947 330 aa2.38□□□□□ -2.03
YKU80YMR106C CWC23P52868 283 aaPredicted RBP2.38□□□□□ -2.03
YKU80YMR106C SBH2P52871 88 aa2.38□□□□□ -2.03
YKU80YMR106C SEH1P53011 349 aaKnown RBP2.38□□□□□ -2.03
YKU80YMR106C YGL036WP53185 909 aaPredicted RBP2.38□□□□□ -2.03
YKU80YMR106C ALG11P53954 548 aaKnown RBP2.38□□□□□ -2.03
YKU80YMR106C RPS15Q01855 142 aaKnown RBP2.38□□□□□ -2.03
YKU80YMR106C DYN2Q02647 92 aa2.38□□□□□ -2.03
YKU80YMR106C RNY1Q02933 434 aaKnown RBP2.38□□□□□ -2.03
YKU80YMR106C HER2Q03557 464 aa2.38□□□□□ -2.03
YKU80YMR106C YDR239CQ03780 787 aa2.38□□□□□ -2.03
YKU80YMR106C NEJ1Q06148 342 aa2.38□□□□□ -2.03
YKU80YMR106C CRD1Q07560 283 aa2.38□□□□□ -2.03
YKU80YMR106C NSE1Q07913 336 aa2.38□□□□□ -2.03
YKU80YMR106C YLR031WQ07978 186 aa2.38□□□□□ -2.03
YKU80YMR106C GEP3Q08622 556 aa2.38□□□□□ -2.03
YKU80YMR106C PER33Q12144 273 aa2.38□□□□□ -2.03
YKU80YMR106C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms