RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W RPL21AQ02753 160 aaKnown RBP0.53□□□□□ -2.32
PRP39YML046W SMC5Q08204 1093 aa0.53□□□□□ -2.32
PRP39YML046W RPL21BQ12672 160 aaKnown RBP0.53□□□□□ -2.32
PRP39YML046W RTP1Q12751 981 aa0.53□□□□□ -2.32
PRP39YML046W YJR112W-AQ3E743 109 aa0.53□□□□□ -2.32
PRP39YML046W YML133CQ03099 1374 aa0.53□□□□□ -2.32
PRP39YML046W YLL067CQ07888 1374 aa0.53□□□□□ -2.32
PRP39YML046W YLL066CQ99208 1374 aa0.53□□□□□ -2.32
PRP39YML046W FIG2P25653 1609 aa0.53□□□□□ -2.32
PRP39YML046W SEC53P07283 254 aaKnown RBP0.52□□□□□ -2.33
PRP39YML046W ASP3-2P0CX77 362 aa0.52□□□□□ -2.33
PRP39YML046W ASP3-3P0CX78 362 aa0.52□□□□□ -2.33
PRP39YML046W ASP3-4P0CX79 362 aa0.52□□□□□ -2.33
PRP39YML046W ASP3-1P0CZ17 362 aa0.52□□□□□ -2.33
PRP39YML046W WBP1P33767 430 aaKnown RBP0.52□□□□□ -2.33
PRP39YML046W PEX22P39718 180 aa0.52□□□□□ -2.33
PRP39YML046W YJL144WP47009 104 aa0.52□□□□□ -2.33
PRP39YML046W AIM24P47127 394 aa0.52□□□□□ -2.33
PRP39YML046W YGR149WP48236 432 aa0.52□□□□□ -2.33
PRP39YML046W BNS1P50084 137 aa0.52□□□□□ -2.33
PRP39YML046W ORT1Q12375 292 aa0.52□□□□□ -2.33
PRP39YML046W FLO1P32768 1537 aa0.52□□□□□ -2.33
PRP39YML046W PRP21P32524 280 aaPredicted RBP0.52□□□□□ -2.33
PRP39YML046W YEF1P32622 495 aa0.52□□□□□ -2.33
PRP39YML046W FLC2P39719 783 aa0.52□□□□□ -2.33
PRP39YML046W SGN1P40561 250 aaKnown RBP RIP-Chip data0.52□□□□□ -2.33not detected
PRP39YML046W COQ5P49017 307 aa0.52□□□□□ -2.33
PRP39YML046W DUO1P53168 247 aaKnown RBP0.52□□□□□ -2.33
PRP39YML046W OAZ1Q02803 292 aa0.52□□□□□ -2.33
PRP39YML046W NGL3Q03210 505 aa0.52□□□□□ -2.33
PRP39YML046W GIR2Q03768 265 aaPredicted RBP0.52□□□□□ -2.33
PRP39YML046W RCN2Q12044 265 aa0.52□□□□□ -2.33
PRP39YML046W EAF3Q12432 401 aa0.52□□□□□ -2.33
PRP39YML046W YLR419WQ06698 1435 aaKnown RBP0.51□□□□□ -2.33
PRP39YML046W TPI1P00942 248 aaKnown RBP0.51□□□□□ -2.33
PRP39YML046W RAD57P25301 460 aa0.51□□□□□ -2.33
PRP39YML046W AGA2P32781 87 aa0.51□□□□□ -2.33
PRP39YML046W NIP100P33420 868 aa0.51□□□□□ -2.33
PRP39YML046W RRP1P35178 278 aaPredicted RBP0.51□□□□□ -2.33
PRP39YML046W CHL4P38907 458 aa0.51□□□□□ -2.33
PRP39YML046W CCT2P39076 527 aaKnown RBP0.51□□□□□ -2.33
PRP39YML046W LCB3P47013 409 aa0.51□□□□□ -2.33
PRP39YML046W SKI8Q02793 397 aaPredicted RBP0.51□□□□□ -2.33
PRP39YML046W YMR018WQ04364 514 aa0.51□□□□□ -2.33
PRP39YML046W RRP9Q06506 573 aaKnown RBP0.51□□□□□ -2.33
PRP39YML046W LOT6Q07923 191 aa0.51□□□□□ -2.33
PRP39YML046W SKI7Q08491 747 aaPredicted RBP0.51□□□□□ -2.33
PRP39YML046W RIM20Q12033 661 aa0.51□□□□□ -2.33
PRP39YML046W HTZ1Q12692 134 aaKnown RBP0.51□□□□□ -2.33
PRP39YML046W SEC39Q12745 709 aa0.51□□□□□ -2.33
PRP39YML046W FKS3Q04952 1785 aa0.51□□□□□ -2.33
PRP39YML046W UBR2Q07963 1872 aa0.5□□□□□ -2.33
PRP39YML046W FOB1O13329 566 aa0.5□□□□□ -2.33
PRP39YML046W IPP1P00817 287 aaKnown RBP0.5□□□□□ -2.33
PRP39YML046W SPS4P09937 338 aa0.5□□□□□ -2.33
PRP39YML046W SPB1P25582 841 aaPredicted RBP0.5□□□□□ -2.33
PRP39YML046W PSO2P30620 661 aa0.5□□□□□ -2.33
PRP39YML046W CST26P38226 397 aa0.5□□□□□ -2.33
PRP39YML046W VHC1P38329 1120 aa0.5□□□□□ -2.33
PRP39YML046W ECM34P38728 170 aa0.5□□□□□ -2.33
PRP39YML046W VTC2P43585 828 aa0.5□□□□□ -2.33
PRP39YML046W PHB2P50085 310 aa0.5□□□□□ -2.33
PRP39YML046W FAR10Q06001 478 aa0.5□□□□□ -2.33
PRP39YML046W YPL278CQ08990 100 aa0.5□□□□□ -2.33
PRP39YML046W NMD4Q12129 218 aa0.5□□□□□ -2.33
PRP39YML046W PIS1P06197 220 aaKnown RBP0.5□□□□□ -2.33
PRP39YML046W STE7P06784 515 aa0.5□□□□□ -2.33
PRP39YML046W DFR1P07807 211 aaKnown RBP RIP-Chip data0.5□□□□□ -2.33not detected
PRP39YML046W CDC16P09798 840 aa0.5□□□□□ -2.33
PRP39YML046W SPO12P17123 173 aa0.5□□□□□ -2.33
PRP39YML046W YCL068CP25593 260 aa0.5□□□□□ -2.33
PRP39YML046W ICL1P28240 557 aaPredicted RBP0.5□□□□□ -2.33
PRP39YML046W MRE11P32829 692 aa0.5□□□□□ -2.33
PRP39YML046W PPQ1P32945 549 aa0.5□□□□□ -2.33
PRP39YML046W HST4P53688 370 aa0.5□□□□□ -2.33
PRP39YML046W SUR7P54003 302 aa0.5□□□□□ -2.33
PRP39YML046W RPT6Q01939 405 aaKnown RBP0.5□□□□□ -2.33
PRP39YML046W GIP3Q03016 1276 aa0.5□□□□□ -2.33
PRP39YML046W MDM36Q06820 579 aa0.5□□□□□ -2.33
PRP39YML046W TIR4Q12218 487 aaPredicted RBP0.5□□□□□ -2.33
PRP39YML046W RMD5Q12508 421 aa0.5□□□□□ -2.33
PRP39YML046W SAG1P20840 650 aa0.49□□□□□ -2.33
PRP39YML046W SOL2P37262 315 aa0.49□□□□□ -2.33
PRP39YML046W SAS2P40963 338 aa0.49□□□□□ -2.33
PRP39YML046W AIP1P46680 615 aaKnown RBP0.49□□□□□ -2.33
PRP39YML046W VEL1P53058 206 aa0.49□□□□□ -2.33
PRP39YML046W CCE1Q03702 353 aa0.49□□□□□ -2.33
PRP39YML046W MRX8Q05473 314 aa0.49□□□□□ -2.33
PRP39YML046W TPT1Q12272 230 aaKnown RBP0.49□□□□□ -2.33
PRP39YML046W CEX1Q12453 761 aa0.49□□□□□ -2.33
PRP39YML046W TY4B-JP47024 1803 aa0.49□□□□□ -2.33
PRP39YML046W TY4B-HP0C2J7 1802 aa0.48□□□□□ -2.33
PRP39YML046W MSB2P32334 1306 aa0.48□□□□□ -2.33
PRP39YML046W GPH1P06738 902 aaKnown RBP0.48□□□□□ -2.33
PRP39YML046W SCH9P11792 824 aaKnown RBP0.48□□□□□ -2.33
PRP39YML046W CBS1P14066 229 aa0.48□□□□□ -2.33
PRP39YML046W PHO84P25297 587 aaKnown RBP0.48□□□□□ -2.33
PRP39YML046W ANR2P36090 516 aaPredicted RBP0.48□□□□□ -2.33
PRP39YML046W YBR056WP38081 501 aa0.48□□□□□ -2.33
PRP39YML046W WSC4P38739 605 aa0.48□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms