RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	SNO4	Q04902	237 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	HSP33	Q08914	237 aa	Known RBP	4.8	□□□□□ -1.64
SEC39	YLR440C	HSP32	Q08992	237 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	YOR223W	Q12015	292 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	BTS1	Q12051	335 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	DCS2	Q12123	353 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	YOR022C	Q12204	715 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	HRT3	Q12347	344 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	DGK1	Q12382	290 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	YLR361C-A	Q3E795	98 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	CDC7	P06243	507 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	PET54	P10834	293 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	FPS1	P23900	669 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	ERV1	P27882	189 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	YJU3	P28321	313 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	PRP18	P33411	251 aa	Predicted RBP	4.79	□□□□□ -1.64
SEC39	YLR440C	YBR062C	P38239	180 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	UTP7	P40055	554 aa	Known RBP	4.79	□□□□□ -1.64
SEC39	YLR440C	ALR2	P43553	858 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	CDC55	Q00362	526 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	EKI1	Q03764	534 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	TMA46	Q12000	345 aa	Known RBP	4.79	□□□□□ -1.64
SEC39	YLR440C	ELG1	Q12050	791 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	TMS1	Q12116	473 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	YOR114W	Q12219	294 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	AFI1	Q99222	893 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	ARG82	P07250	355 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	RPL19A	P0CX82	189 aa	Known RBP	4.79	□□□□□ -1.64
SEC39	YLR440C	RPL19B	P0CX83	189 aa	Predicted RBP	4.79	□□□□□ -1.64
SEC39	YLR440C	CPR3	P25719	182 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	TIP20	P33891	701 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	TAF14	P35189	244 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	NTR2	P36118	322 aa	Predicted RBP	4.79	□□□□□ -1.64
SEC39	YLR440C	SRO77	P38163	1010 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	YBR220C	P38318	560 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	SRP14	P38985	146 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	SWP82	P43554	623 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	SNG1	P46950	547 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	IMA1	P53051	589 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	MTC3	P53077	123 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	YGL108C	P53139	140 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	YDR541C	Q03049	344 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	SNO1	Q03144	224 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	YMR209C	Q03648	457 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	YDR109C	Q04585	715 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	SFH1	Q06168	426 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	XYL2	Q07993	356 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	DCI1	Q08558	271 aa		4.79	□□□□□ -1.64
SEC39	YLR440C	ATP2	P00830	511 aa	Known RBP	4.78	□□□□□ -1.64
SEC39	YLR440C	MET16	P18408	261 aa	Predicted RBP	4.78	□□□□□ -1.64
SEC39	YLR440C	SCL1	P21243	252 aa	Known RBP	4.78	□□□□□ -1.64
SEC39	YLR440C	CWP1	P28319	239 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	SBA1	P28707	216 aa	Known RBP	4.78	□□□□□ -1.64
SEC39	YLR440C	SAC1	P32368	623 aa	Known RBP	4.78	□□□□□ -1.64
SEC39	YLR440C	HOG1	P32485	435 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	NDC1	P32500	655 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	TUL1	P36096	758 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	LEU5	P38702	357 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	BIG1	P38813	335 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	PRK1	P40494	810 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	CIN1	P40987	1014 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	PPT1	P53043	513 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	RMD9	P53140	646 aa	Known RBP	4.78	□□□□□ -1.64
SEC39	YLR440C	NOP19	P53317	196 aa	Predicted RBP	4.78	□□□□□ -1.64
SEC39	YLR440C	YNR065C	P53751	1116 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	NMA111	P53920	997 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	ACL4	Q03771	387 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	YDR387C	Q04162	555 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	RIF2	Q06208	395 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	RAD34	Q06665	692 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	HRD1	Q08109	551 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	FEX1	Q08913	375 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	RAD10	P06838	210 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	PUT2	P07275	575 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	MOD5	P07884	428 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	SPE1	P08432	466 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	HEM13	P11353	328 aa	Known RBP	4.78	□□□□□ -1.64
SEC39	YLR440C	STE18	P18852	110 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	VPS33	P20795	691 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	MIR1	P23641	311 aa	Known RBP	4.78	□□□□□ -1.64
SEC39	YLR440C	NFS1	P25374	497 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	UBC8	P28263	218 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	CAP1	P28495	268 aa	Known RBP	4.78	□□□□□ -1.64
SEC39	YLR440C	ACH1	P32316	526 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	KAE1	P36132	386 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	RIB1	P38066	345 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	WSC4	P38739	605 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	CCT4	P39078	528 aa	Known RBP	4.78	□□□□□ -1.64
SEC39	YLR440C	UIP3	P39547	235 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	CAK1	P43568	368 aa	Predicted RBP	4.78	□□□□□ -1.64
SEC39	YLR440C	UBP6	P43593	499 aa	Known RBP	4.78	□□□□□ -1.64
SEC39	YLR440C	BIR1	P47134	954 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	PHB2	P50085	310 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	SOL1	P50278	321 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	YGL235W	P53071	178 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	NRK1	P53915	240 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	COG5	P53951	403 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	YDR179W-A	Q03983	463 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	SLF1	Q12034	447 aa	Known RBP	4.78	□□□□□ -1.64
SEC39	YLR440C	NMD4	Q12129	218 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms