RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W SKT5P34226 696 aa1.9□□□□□ -2.11
SEC22YLR268W PFF1P38244 976 aa1.9□□□□□ -2.11
SEC22YLR268W RXT2P38255 430 aa1.9□□□□□ -2.11
SEC22YLR268W YHR131CP38835 850 aa1.9□□□□□ -2.11
SEC22YLR268W MLH1P38920 769 aa1.9□□□□□ -2.11
SEC22YLR268W AIM10P39965 576 aaKnown RBP1.9□□□□□ -2.11
SEC22YLR268W MLC1P53141 149 aa1.9□□□□□ -2.11
SEC22YLR268W YGR117CP53270 476 aa1.9□□□□□ -2.11
SEC22YLR268W MKC7P53379 596 aa1.9□□□□□ -2.11
SEC22YLR268W PRP3Q03338 469 aaPredicted RBP1.9□□□□□ -2.11
SEC22YLR268W LOT6Q07923 191 aa1.9□□□□□ -2.11
SEC22YLR268W AAD15Q08361 143 aa1.9□□□□□ -2.11
SEC22YLR268W YPS3Q12303 508 aa1.9□□□□□ -2.11
SEC22YLR268W RNH203Q12338 110 aa1.9□□□□□ -2.11
SEC22YLR268W PSK1P31374 1356 aa1.89□□□□□ -2.11
SEC22YLR268W PAB1P04147 577 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11 RIP-Chip
SEC22YLR268W OPI3P05375 206 aa1.89□□□□□ -2.11
SEC22YLR268W TPK3P05986 398 aa1.89□□□□□ -2.11
SEC22YLR268W RPL12AP0CX53 165 aaKnown RBP1.89□□□□□ -2.11
SEC22YLR268W RPL12BP0CX54 165 aa1.89□□□□□ -2.11
SEC22YLR268W ARF1P11076 181 aaKnown RBP1.89□□□□□ -2.11
SEC22YLR268W CAP2P13517 287 aa1.89□□□□□ -2.11
SEC22YLR268W EXG1P23776 448 aaKnown RBP1.89□□□□□ -2.11
SEC22YLR268W DPH5P32469 300 aaPredicted RBP1.89□□□□□ -2.11
SEC22YLR268W YSC83P32792 385 aa1.89□□□□□ -2.11
SEC22YLR268W BLI1P35727 113 aa1.89□□□□□ -2.11
SEC22YLR268W DOA1P36037 715 aa1.89□□□□□ -2.11
SEC22YLR268W MRPS9P38120 278 aa1.89□□□□□ -2.11
SEC22YLR268W KAP104P38217 918 aaKnown RBP1.89□□□□□ -2.11
SEC22YLR268W WSS1P38838 269 aa1.89□□□□□ -2.11
SEC22YLR268W MNL1P38888 796 aa1.89□□□□□ -2.11
SEC22YLR268W ATM1P40416 690 aa1.89□□□□□ -2.11
SEC22YLR268W LCB3P47013 409 aa1.89□□□□□ -2.11
SEC22YLR268W STE24P47154 453 aa1.89□□□□□ -2.11
SEC22YLR268W ASN2P49090 572 aaKnown RBP1.89□□□□□ -2.11
SEC22YLR268W MRM2P53123 320 aa1.89□□□□□ -2.11
SEC22YLR268W RTT102P53330 157 aa1.89□□□□□ -2.11
SEC22YLR268W URC2Q04411 772 aa1.89□□□□□ -2.11
SEC22YLR268W SRN2Q99176 213 aa1.89□□□□□ -2.11
SEC22YLR268W RPL6BP05739 176 aaKnown RBP1.88□□□□□ -2.11
SEC22YLR268W PIS1P06197 220 aaKnown RBP1.88□□□□□ -2.11
SEC22YLR268W CSE2P33308 149 aa1.88□□□□□ -2.11
SEC22YLR268W GDT1P38301 280 aaPredicted RBP1.88□□□□□ -2.11
SEC22YLR268W MAM33P40513 266 aa1.88□□□□□ -2.11
SEC22YLR268W EPL1P43572 832 aa1.88□□□□□ -2.11
SEC22YLR268W PMT5P52867 743 aa1.88□□□□□ -2.11
SEC22YLR268W SPR6Q01684 191 aa1.88□□□□□ -2.11
SEC22YLR268W RPL6AQ02326 176 aaKnown RBP1.88□□□□□ -2.11
SEC22YLR268W PRM6Q04705 352 aa1.88□□□□□ -2.11
SEC22YLR268W RTN1Q04947 295 aaKnown RBP1.88□□□□□ -2.11
SEC22YLR268W ECM7Q06200 448 aa1.88□□□□□ -2.11
SEC22YLR268W RIF2Q06208 395 aa1.88□□□□□ -2.11
SEC22YLR268W ASA1Q06822 443 aa1.88□□□□□ -2.11
SEC22YLR268W SMC5Q08204 1093 aa1.88□□□□□ -2.11
SEC22YLR268W YGK3Q12222 375 aaPredicted RBP1.88□□□□□ -2.11
SEC22YLR268W JID1Q12350 301 aa1.88□□□□□ -2.11
SEC22YLR268W YOP1Q12402 180 aa1.88□□□□□ -2.11
SEC22YLR268W EAF3Q12432 401 aa1.88□□□□□ -2.11
SEC22YLR268W SSC1P0CS90 654 aaKnown RBP1.87□□□□□ -2.11
SEC22YLR268W MSI1P13712 422 aa1.87□□□□□ -2.11
SEC22YLR268W MSP1P28737 362 aa1.87□□□□□ -2.11
SEC22YLR268W MCR1P36060 302 aaKnown RBP1.87□□□□□ -2.11
SEC22YLR268W YHK8P38776 514 aa1.87□□□□□ -2.11
SEC22YLR268W APE4P38821 490 aa1.87□□□□□ -2.11
SEC22YLR268W HAC1P41546 238 aa1.87□□□□□ -2.11
SEC22YLR268W YFR057WP43625 151 aa1.87□□□□□ -2.11
SEC22YLR268W AIM24P47127 394 aa1.87□□□□□ -2.11
SEC22YLR268W TOS2P50078 622 aa1.87□□□□□ -2.11
SEC22YLR268W YIP5P53108 310 aa1.87□□□□□ -2.11
SEC22YLR268W RRN9P53437 365 aa1.87□□□□□ -2.11
SEC22YLR268W TRM112P53738 135 aaPredicted RBP1.87□□□□□ -2.11
SEC22YLR268W YMR102CQ03177 834 aa1.87□□□□□ -2.11
SEC22YLR268W IPK1Q06667 281 aa1.87□□□□□ -2.11
SEC22YLR268W YPR091CQ06833 770 aa1.87□□□□□ -2.11
SEC22YLR268W YFH1Q07540 174 aa1.87□□□□□ -2.11
SEC22YLR268W NOP6Q07623 225 aaKnown RBP1.87□□□□□ -2.11
SEC22YLR268W CMS1Q07897 291 aaKnown RBP1.87□□□□□ -2.11
SEC22YLR268W SMF3Q12078 473 aaPredicted RBP1.87□□□□□ -2.11
SEC22YLR268W YDR061WQ12298 539 aa1.87□□□□□ -2.11
SEC22YLR268W AHC1Q12433 566 aa1.87□□□□□ -2.11
SEC22YLR268W IZH2Q12442 317 aa1.87□□□□□ -2.11
SEC22YLR268W HTZ1Q12692 134 aaKnown RBP1.87□□□□□ -2.11
SEC22YLR268W TFB5Q3E7C1 72 aaPredicted RBP1.87□□□□□ -2.11
SEC22YLR268W RPB5P20434 215 aa1.86□□□□□ -2.11
SEC22YLR268W PRR1P28708 518 aa1.86□□□□□ -2.11
SEC22YLR268W SWI3P32591 825 aa1.86□□□□□ -2.11
SEC22YLR268W RAD5P32849 1169 aaPredicted RBP1.86□□□□□ -2.11
SEC22YLR268W GPX2P38143 162 aa1.86□□□□□ -2.11
SEC22YLR268W YSW1P38280 609 aa1.86□□□□□ -2.11
SEC22YLR268W SPP381P38282 291 aaPredicted RBP1.86□□□□□ -2.11
SEC22YLR268W TIM17P39515 158 aa1.86□□□□□ -2.11
SEC22YLR268W BIR1P47134 954 aa1.86□□□□□ -2.11
SEC22YLR268W MST27P53176 234 aa1.86□□□□□ -2.11
SEC22YLR268W COS1P53822 381 aa1.86□□□□□ -2.11
SEC22YLR268W EOS1P53938 366 aa1.86□□□□□ -2.11
SEC22YLR268W TDA1Q03533 586 aa1.86□□□□□ -2.11
SEC22YLR268W LIP2Q06005 328 aa1.86□□□□□ -2.11
SEC22YLR268W LDS2Q08218 356 aa1.86□□□□□ -2.11
SEC22YLR268W PLP2Q12017 286 aa1.86□□□□□ -2.11
SEC22YLR268W FRE6Q12473 712 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms