RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C BYE1P36106 594 aa2.48□□□□□ -2.01
ATG38YLR211C JNM1P36224 373 aa2.48□□□□□ -2.01
ATG38YLR211C STN1P38960 494 aa2.48□□□□□ -2.01
ATG38YLR211C YER079WP40052 210 aaKnown RBP2.48□□□□□ -2.01
ATG38YLR211C FCY22Q12119 530 aa2.48□□□□□ -2.01
ATG38YLR211C RFM1Q12192 310 aa2.48□□□□□ -2.01
ATG38YLR211C MCT1Q12283 360 aa2.48□□□□□ -2.01
ATG38YLR211C PRM7Q12459 698 aa2.48□□□□□ -2.01
ATG38YLR211C DST1P07273 309 aa2.47□□□□□ -2.01
ATG38YLR211C FUN26P31381 517 aa2.47□□□□□ -2.01
ATG38YLR211C CAK1P43568 368 aaPredicted RBP2.47□□□□□ -2.01
ATG38YLR211C KEG1P43614 200 aa2.47□□□□□ -2.01
ATG38YLR211C TCB2P48231 1178 aa2.47□□□□□ -2.01
ATG38YLR211C YIP5P53108 310 aa2.47□□□□□ -2.01
ATG38YLR211C PRM6Q04705 352 aa2.47□□□□□ -2.01
ATG38YLR211C YHC1Q05900 231 aaKnown RBP2.47□□□□□ -2.01
ATG38YLR211C YDL199CQ12407 687 aa2.47□□□□□ -2.01
ATG38YLR211C CEX1Q12453 761 aa2.47□□□□□ -2.01
ATG38YLR211C FOL3Q12676 427 aaPredicted RBP2.47□□□□□ -2.01
ATG38YLR211C PAB1P04147 577 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
ATG38YLR211C ATP1P07251 545 aaKnown RBP2.46□□□□□ -2.02
ATG38YLR211C ZUO1P32527 433 aaKnown RBP2.46□□□□□ -2.02
ATG38YLR211C GPX2P38143 162 aa2.46□□□□□ -2.02
ATG38YLR211C GPI16P38875 610 aa2.46□□□□□ -2.02
ATG38YLR211C PFS2P42841 465 aaKnown RBP2.46□□□□□ -2.02
ATG38YLR211C RRP46P53256 223 aaPredicted RBP2.46□□□□□ -2.02
ATG38YLR211C YGR117CP53270 476 aa2.46□□□□□ -2.02
ATG38YLR211C RRN9P53437 365 aa2.46□□□□□ -2.02
ATG38YLR211C HST1P53685 503 aa2.46□□□□□ -2.02
ATG38YLR211C ERB1Q04660 807 aaKnown RBP2.46□□□□□ -2.02
ATG38YLR211C YDL114WQ07530 308 aa2.46□□□□□ -2.02
ATG38YLR211C MED2Q12124 431 aa2.46□□□□□ -2.02
ATG38YLR211C YPS3Q12303 508 aa2.46□□□□□ -2.02
ATG38YLR211C DEP1P31385 405 aa2.45□□□□□ -2.02
ATG38YLR211C ZTA1P38230 334 aaKnown RBP2.45□□□□□ -2.02
ATG38YLR211C PFF1P38244 976 aa2.45□□□□□ -2.02
ATG38YLR211C HEM14P40012 539 aa2.45□□□□□ -2.02
ATG38YLR211C MMF1P40185 145 aaKnown RBP2.45□□□□□ -2.02
ATG38YLR211C ABM1P47146 123 aa2.45□□□□□ -2.02
ATG38YLR211C STE24P47154 453 aa2.45□□□□□ -2.02
ATG38YLR211C SEH1P53011 349 aaKnown RBP2.45□□□□□ -2.02
ATG38YLR211C SPR6Q01684 191 aa2.45□□□□□ -2.02
ATG38YLR211C FUR1P18562 216 aaKnown RBP2.44□□□□□ -2.02
ATG38YLR211C CMK2P22517 447 aa2.44□□□□□ -2.02
ATG38YLR211C MSP1P28737 362 aa2.44□□□□□ -2.02
ATG38YLR211C INM1P38710 295 aa2.44□□□□□ -2.02
ATG38YLR211C CHL4P38907 458 aa2.44□□□□□ -2.02
ATG38YLR211C KTR6P54070 446 aa2.44□□□□□ -2.02
ATG38YLR211C YLR345WQ06137 509 aa2.44□□□□□ -2.02
ATG38YLR211C VPS54Q12071 889 aa2.44□□□□□ -2.02
ATG38YLR211C RNH203Q12338 110 aa2.44□□□□□ -2.02
ATG38YLR211C PUT4P15380 627 aa2.43□□□□□ -2.02
ATG38YLR211C CLB1P24868 471 aa2.43□□□□□ -2.02
ATG38YLR211C TOA2P32774 122 aa2.43□□□□□ -2.02
ATG38YLR211C COX13P32799 129 aa2.43□□□□□ -2.02
ATG38YLR211C OLA1P38219 394 aaKnown RBP2.43□□□□□ -2.02
ATG38YLR211C WSS1P38838 269 aa2.43□□□□□ -2.02
ATG38YLR211C SEC9P40357 651 aa2.43□□□□□ -2.02
ATG38YLR211C SRB7P47822 140 aa2.43□□□□□ -2.02
ATG38YLR211C PMT5P52867 743 aa2.43□□□□□ -2.02
ATG38YLR211C VHT1P53241 593 aa2.43□□□□□ -2.02
ATG38YLR211C RPL21AQ02753 160 aaKnown RBP2.43□□□□□ -2.02
ATG38YLR211C YDR341CQ05506 607 aaKnown RBP2.43□□□□□ -2.02
ATG38YLR211C MCH1Q07376 486 aa2.43□□□□□ -2.02
ATG38YLR211C TIR4Q12218 487 aaPredicted RBP2.43□□□□□ -2.02
ATG38YLR211C RUP1Q12242 671 aa2.43□□□□□ -2.02
ATG38YLR211C RPL21BQ12672 160 aaKnown RBP2.43□□□□□ -2.02
ATG38YLR211C TPI1P00942 248 aaKnown RBP2.42□□□□□ -2.02
ATG38YLR211C OPI3P05375 206 aa2.42□□□□□ -2.02
ATG38YLR211C CDC21P06785 304 aa2.42□□□□□ -2.02
ATG38YLR211C CHA1P25379 360 aaKnown RBP2.42□□□□□ -2.02
ATG38YLR211C RPC53P25441 422 aa2.42□□□□□ -2.02
ATG38YLR211C RIM1P32445 135 aaKnown RBP2.42□□□□□ -2.02
ATG38YLR211C FMT1P32785 401 aa2.42□□□□□ -2.02
ATG38YLR211C BLI1P35727 113 aa2.42□□□□□ -2.02
ATG38YLR211C PRY2P36110 329 aa2.42□□□□□ -2.02
ATG38YLR211C YFL012WP43580 148 aa2.42□□□□□ -2.02
ATG38YLR211C RSC1P53236 928 aa2.42□□□□□ -2.02
ATG38YLR211C ENT5Q03769 411 aaKnown RBP2.42□□□□□ -2.02
ATG38YLR211C YLR456WQ06199 204 aa2.42□□□□□ -2.02
ATG38YLR211C YOR376WQ08900 122 aa2.42□□□□□ -2.02
ATG38YLR211C GIT1P25346 518 aa2.41□□□□□ -2.02
ATG38YLR211C RAD5P32849 1169 aaPredicted RBP2.41□□□□□ -2.02
ATG38YLR211C PDC2P32896 925 aa2.41□□□□□ -2.02
ATG38YLR211C SPO23P33757 523 aa2.41□□□□□ -2.02
ATG38YLR211C TIR2P33890 251 aa2.41□□□□□ -2.02
ATG38YLR211C MCR1P36060 302 aaKnown RBP2.41□□□□□ -2.02
ATG38YLR211C ECM8P38246 354 aa2.41□□□□□ -2.02
ATG38YLR211C ALF1P53904 254 aa2.41□□□□□ -2.02
ATG38YLR211C SPC19Q03954 165 aa2.41□□□□□ -2.02
ATG38YLR211C ECM7Q06200 448 aa2.41□□□□□ -2.02
ATG38YLR211C UAF30Q08747 228 aa2.41□□□□□ -2.02
ATG38YLR211C YDR061WQ12298 539 aa2.41□□□□□ -2.02
ATG38YLR211C PDX1P16451 410 aa2.4□□□□□ -2.03
ATG38YLR211C OPI1P21957 404 aa2.4□□□□□ -2.03
ATG38YLR211C CPR2P23285 205 aa2.4□□□□□ -2.03
ATG38YLR211C HSP104P31539 908 aaKnown RBP2.4□□□□□ -2.03
ATG38YLR211C SWI3P32591 825 aa2.4□□□□□ -2.03
ATG38YLR211C SKT5P34226 696 aa2.4□□□□□ -2.03
ATG38YLR211C FAD1P38913 306 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms