RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C IPK1Q06667 281 aa2.52□□□□□ -2.01
NYV1YLR093C RUP1Q12242 671 aa2.52□□□□□ -2.01
NYV1YLR093C MDY2Q12285 212 aa2.52□□□□□ -2.01
NYV1YLR093C PDE2P06776 526 aa2.51□□□□□ -2.01
NYV1YLR093C STE3P06783 470 aa2.51□□□□□ -2.01
NYV1YLR093C RPC40P07703 335 aaKnown RBP2.51□□□□□ -2.01
NYV1YLR093C CTR86P25355 563 aa2.51□□□□□ -2.01
NYV1YLR093C HSP104P31539 908 aaKnown RBP2.51□□□□□ -2.01
NYV1YLR093C SMY1P32364 656 aaKnown RBP2.51□□□□□ -2.01
NYV1YLR093C REC114P32841 428 aa2.51□□□□□ -2.01
NYV1YLR093C PPQ1P32945 549 aa2.51□□□□□ -2.01
NYV1YLR093C BMT2P38278 337 aa2.51□□□□□ -2.01
NYV1YLR093C RRP4P38792 359 aaKnown RBP2.51□□□□□ -2.01
NYV1YLR093C LIN1P38852 340 aaPredicted RBP2.51□□□□□ -2.01
NYV1YLR093C YAL037WP39728 267 aa2.51□□□□□ -2.01
NYV1YLR093C AIM10P39965 576 aaKnown RBP2.51□□□□□ -2.01
NYV1YLR093C HST1P53685 503 aa2.51□□□□□ -2.01
NYV1YLR093C VPS20Q04272 221 aa2.51□□□□□ -2.01
NYV1YLR093C NSE1Q07913 336 aa2.51□□□□□ -2.01
NYV1YLR093C PLP2Q12017 286 aa2.51□□□□□ -2.01
NYV1YLR093C BUG1Q12191 341 aa2.51□□□□□ -2.01
NYV1YLR093C SRN2Q99176 213 aa2.51□□□□□ -2.01
NYV1YLR093C CYC3P06182 269 aa2.5□□□□□ -2.01
NYV1YLR093C SAG1P20840 650 aa2.5□□□□□ -2.01
NYV1YLR093C PHO91P27514 894 aa2.5□□□□□ -2.01
NYV1YLR093C ECM25P32525 599 aa2.5□□□□□ -2.01
NYV1YLR093C NRP1P32770 719 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
NYV1YLR093C RIB7P33312 244 aa2.5□□□□□ -2.01
NYV1YLR093C QDR3P38227 689 aa2.5□□□□□ -2.01
NYV1YLR093C STP2P38704 541 aa2.5□□□□□ -2.01
NYV1YLR093C RTT105P40063 208 aa2.5□□□□□ -2.01
NYV1YLR093C ROG1P53118 685 aa2.5□□□□□ -2.01
NYV1YLR093C MPS2P53159 387 aa2.5□□□□□ -2.01
NYV1YLR093C URH1Q04179 340 aa2.5□□□□□ -2.01
NYV1YLR093C RRB1Q04225 511 aaKnown RBP2.5□□□□□ -2.01
NYV1YLR093C CBP2P03874 630 aaPredicted RBP2.49□□□□□ -2.01
NYV1YLR093C IMA3P0CW40 589 aa2.49□□□□□ -2.01
NYV1YLR093C IMA4P0CW41 589 aa2.49□□□□□ -2.01
NYV1YLR093C DAL80P26343 269 aa2.49□□□□□ -2.01
NYV1YLR093C ITR1P30605 584 aa2.49□□□□□ -2.01
NYV1YLR093C YSC83P32792 385 aa2.49□□□□□ -2.01
NYV1YLR093C RRP1P35178 278 aaPredicted RBP2.49□□□□□ -2.01
NYV1YLR093C YHR131CP38835 850 aa2.49□□□□□ -2.01
NYV1YLR093C YHR177WP38867 453 aa2.49□□□□□ -2.01
NYV1YLR093C MNL1P38888 796 aa2.49□□□□□ -2.01
NYV1YLR093C SEO1P39709 593 aa2.49□□□□□ -2.01
NYV1YLR093C LOC1P43586 204 aaPredicted RBP2.49□□□□□ -2.01
NYV1YLR093C PRM1P53835 661 aa2.49□□□□□ -2.01
NYV1YLR093C GIP3Q03016 1276 aa2.49□□□□□ -2.01
NYV1YLR093C ABZ2Q03266 374 aa2.49□□□□□ -2.01
NYV1YLR093C ECM11Q04110 302 aa2.49□□□□□ -2.01
NYV1YLR093C YDR387CQ04162 555 aa2.49□□□□□ -2.01
NYV1YLR093C STE23Q06010 1027 aa2.49□□□□□ -2.01
NYV1YLR093C RLP24Q07915 199 aaKnown RBP2.49□□□□□ -2.01
NYV1YLR093C IMA2Q08295 589 aa2.49□□□□□ -2.01
NYV1YLR093C YPQ1Q12010 308 aa2.49□□□□□ -2.01
NYV1YLR093C YPR022CQ12139 1133 aa2.49□□□□□ -2.01
NYV1YLR093C RNH203Q12338 110 aa2.49□□□□□ -2.01
NYV1YLR093C CCH1P50077 2039 aa2.48□□□□□ -2.01
NYV1YLR093C HIS4P00815 799 aaKnown RBP2.48□□□□□ -2.01
NYV1YLR093C OM45P16547 393 aa2.48□□□□□ -2.01
NYV1YLR093C RPI1P23250 407 aaKnown RBP2.48□□□□□ -2.01
NYV1YLR093C PSO2P30620 661 aa2.48□□□□□ -2.01
NYV1YLR093C APE2P32454 952 aaKnown RBP2.48□□□□□ -2.01
NYV1YLR093C MUD1P32605 298 aaKnown RBP2.48□□□□□ -2.01
NYV1YLR093C MRPL40P36534 297 aa2.48□□□□□ -2.01
NYV1YLR093C MRPS9P38120 278 aa2.48□□□□□ -2.01
NYV1YLR093C CHK1P38147 527 aa2.48□□□□□ -2.01
NYV1YLR093C INM1P38710 295 aa2.48□□□□□ -2.01
NYV1YLR093C PAC11P40960 533 aa2.48□□□□□ -2.01
NYV1YLR093C PIB2P53191 635 aa2.48□□□□□ -2.01
NYV1YLR093C PCP1P53259 346 aa2.48□□□□□ -2.01
NYV1YLR093C RTT102P53330 157 aa2.48□□□□□ -2.01
NYV1YLR093C YNR048WP53740 393 aa2.48□□□□□ -2.01
NYV1YLR093C YIF1P53845 314 aaKnown RBP2.48□□□□□ -2.01
NYV1YLR093C DSL1P53847 754 aa2.48□□□□□ -2.01
NYV1YLR093C GPI15P53961 229 aa2.48□□□□□ -2.01
NYV1YLR093C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
NYV1YLR093C YPR078CQ06813 372 aa2.48□□□□□ -2.01
NYV1YLR093C SNX3Q08826 162 aaKnown RBP2.48□□□□□ -2.01
NYV1YLR093C ATG34Q12292 412 aa2.48□□□□□ -2.01
NYV1YLR093C YOR012WQ12351 137 aa2.48□□□□□ -2.01
NYV1YLR093C VPS63O13549 108 aa2.47□□□□□ -2.01
NYV1YLR093C SLY1P22213 666 aa2.47□□□□□ -2.01
NYV1YLR093C RAD57P25301 460 aa2.47□□□□□ -2.01
NYV1YLR093C CYS4P32582 507 aaKnown RBP2.47□□□□□ -2.01
NYV1YLR093C SSE1P32589 693 aaKnown RBP2.47□□□□□ -2.01
NYV1YLR093C EBP2P36049 427 aaKnown RBP2.47□□□□□ -2.01
NYV1YLR093C SPP381P38282 291 aaPredicted RBP2.47□□□□□ -2.01
NYV1YLR093C YHR122WP38829 231 aa2.47□□□□□ -2.01
NYV1YLR093C PCF11P39081 626 aaPredicted RBP2.47□□□□□ -2.01
NYV1YLR093C SSO2P39926 295 aa2.47□□□□□ -2.01
NYV1YLR093C DFG10P40526 253 aa2.47□□□□□ -2.01
NYV1YLR093C PMT5P52867 743 aa2.47□□□□□ -2.01
NYV1YLR093C RPN14P53196 417 aa2.47□□□□□ -2.01
NYV1YLR093C ARP5P53946 755 aa2.47□□□□□ -2.01
NYV1YLR093C URC2Q04411 772 aa2.47□□□□□ -2.01
NYV1YLR093C CUR1Q06469 252 aa2.47□□□□□ -2.01
NYV1YLR093C SKI7Q08491 747 aaPredicted RBP2.47□□□□□ -2.01
NYV1YLR093C ORT1Q12375 292 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 82.4 ms