RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C CAT2P32796 670 aaKnown RBP10.47□□□□□ -0.73
SPT8YLR055C RSM22P36056 628 aa10.47□□□□□ -0.73
SPT8YLR055C DBP8P38719 431 aa10.47□□□□□ -0.73
SPT8YLR055C YAE1P47118 141 aaPredicted RBP10.47□□□□□ -0.73
SPT8YLR055C FDC1Q03034 503 aa10.47□□□□□ -0.73
SPT8YLR055C YMR087WQ04299 284 aa10.47□□□□□ -0.73
SPT8YLR055C TRM8Q12009 286 aa10.47□□□□□ -0.73
SPT8YLR055C YPR011CQ12251 326 aa10.47□□□□□ -0.73
SPT8YLR055C MRX4Q12467 430 aa10.47□□□□□ -0.73
SPT8YLR055C NAG1Q8TGN9 163 aa10.47□□□□□ -0.73
SPT8YLR055C YOR019WQ99248 730 aa10.47□□□□□ -0.73
SPT8YLR055C URA3P03962 267 aa10.46□□□□□ -0.74
SPT8YLR055C MER1P16523 270 aa10.46□□□□□ -0.74
SPT8YLR055C LYP1P32487 611 aa10.46□□□□□ -0.74
SPT8YLR055C YKL151CP36059 337 aa10.46□□□□□ -0.74
SPT8YLR055C BAT1P38891 393 aaKnown RBP10.46□□□□□ -0.74
SPT8YLR055C ATG18P43601 500 aa10.46□□□□□ -0.74
SPT8YLR055C MDE1P47095 244 aa10.46□□□□□ -0.74
SPT8YLR055C STE24P47154 453 aa10.46□□□□□ -0.74
SPT8YLR055C ECL1P48235 211 aa10.46□□□□□ -0.74
SPT8YLR055C HST3P53687 447 aa10.46□□□□□ -0.74
SPT8YLR055C VHS1Q03785 461 aa10.46□□□□□ -0.74
SPT8YLR055C ARX1Q03862 593 aaKnown RBP10.46□□□□□ -0.74
SPT8YLR055C ENV7Q12003 364 aa10.46□□□□□ -0.74
SPT8YLR055C YPR096CO13587 100 aa10.45□□□□□ -0.74
SPT8YLR055C FPS1P23900 669 aa10.45□□□□□ -0.74
SPT8YLR055C ARE1P25628 610 aa10.45□□□□□ -0.74
SPT8YLR055C HYM1P32464 399 aa10.45□□□□□ -0.74
SPT8YLR055C SRX1P36077 127 aa10.45□□□□□ -0.74
SPT8YLR055C IML3P38265 245 aa10.45□□□□□ -0.74
SPT8YLR055C VRG4P40107 337 aa10.45□□□□□ -0.74
SPT8YLR055C YFR018CP43599 363 aa10.45□□□□□ -0.74
SPT8YLR055C IRC7P43623 340 aa10.45□□□□□ -0.74
SPT8YLR055C ATG38Q05789 226 aaKnown RBP10.45□□□□□ -0.74
SPT8YLR055C DIN7Q12086 430 aa10.45□□□□□ -0.74
SPT8YLR055C SLH1P53327 1967 aaKnown RBP10.45□□□□□ -0.74
SPT8YLR055C AI3P03877 415 aa10.44□□□□□ -0.74
SPT8YLR055C PET9P18239 318 aaKnown RBP10.44□□□□□ -0.74
SPT8YLR055C RFA2P26754 273 aaKnown RBP10.44□□□□□ -0.74
SPT8YLR055C LHP1P33399 275 aaKnown RBP10.44□□□□□ -0.74
SPT8YLR055C SPO23P33757 523 aa10.44□□□□□ -0.74
SPT8YLR055C YBR071WP38243 211 aa10.44□□□□□ -0.74
SPT8YLR055C LEU5P38702 357 aa10.44□□□□□ -0.74
SPT8YLR055C CTF8P38877 133 aa10.44□□□□□ -0.74
SPT8YLR055C SSN3P39073 555 aa10.44□□□□□ -0.74
SPT8YLR055C GDS1P41913 522 aa10.44□□□□□ -0.74
SPT8YLR055C NNF1P47149 201 aa10.44□□□□□ -0.74
SPT8YLR055C LSM7P53905 115 aaKnown RBP10.44□□□□□ -0.74
SPT8YLR055C NPL3Q01560 414 aaKnown RBP RIP-Chip data10.44□□□□□ -0.74not detected
SPT8YLR055C TRM82Q03774 444 aa10.44□□□□□ -0.74
SPT8YLR055C ARG7Q04728 441 aa10.44□□□□□ -0.74
SPT8YLR055C SFM1Q12314 213 aa10.44□□□□□ -0.74
SPT8YLR055C LOT5P34234 306 aa10.44□□□□□ -0.74
SPT8YLR055C TAF14P35189 244 aa10.44□□□□□ -0.74
SPT8YLR055C GMH1P36125 273 aa10.44□□□□□ -0.74
SPT8YLR055C YHR035WP38769 630 aa10.44□□□□□ -0.74
SPT8YLR055C TIF34P40217 347 aaKnown RBP10.44□□□□□ -0.74
SPT8YLR055C RPS12P48589 143 aaKnown RBP10.44□□□□□ -0.74
SPT8YLR055C RRN9P53437 365 aa10.44□□□□□ -0.74
SPT8YLR055C TGL2P54857 326 aa10.44□□□□□ -0.74
SPT8YLR055C YOR238WQ08634 303 aa10.44□□□□□ -0.74
SPT8YLR055C YOR214CQ12282 236 aa10.44□□□□□ -0.74
SPT8YLR055C CYC1P00044 109 aaPredicted RBP10.43□□□□□ -0.74
SPT8YLR055C FLP1P03870 423 aa10.43□□□□□ -0.74
SPT8YLR055C SWI5P08153 709 aa10.43□□□□□ -0.74
SPT8YLR055C RRP3P38712 501 aaKnown RBP10.43□□□□□ -0.74
SPT8YLR055C ZRG8P40021 1076 aa10.43□□□□□ -0.74
SPT8YLR055C YER137CP40083 148 aaKnown RBP10.43□□□□□ -0.74
SPT8YLR055C YGR201CP42936 225 aa10.43□□□□□ -0.74
SPT8YLR055C YJR030CP47101 745 aa10.43□□□□□ -0.74
SPT8YLR055C YGR015CP53208 328 aa10.43□□□□□ -0.74
SPT8YLR055C MRPS16Q02608 121 aa10.43□□□□□ -0.74
SPT8YLR055C YPL113CQ02961 396 aa10.43□□□□□ -0.74
SPT8YLR055C GIP3Q03016 1276 aa10.43□□□□□ -0.74
SPT8YLR055C CCE1Q03702 353 aa10.43□□□□□ -0.74
SPT8YLR055C AIM36Q03798 255 aa10.43□□□□□ -0.74
SPT8YLR055C MFB1Q04922 465 aa10.43□□□□□ -0.74
SPT8YLR055C RTT10Q08924 1013 aa10.43□□□□□ -0.74
SPT8YLR055C YEL009C-AA0A023PZF2 135 aa10.42□□□□□ -0.74
SPT8YLR055C RAD52P06778 471 aaKnown RBP10.42□□□□□ -0.74
SPT8YLR055C RPS1BP23248 255 aaKnown RBP10.42□□□□□ -0.74
SPT8YLR055C HXT4P32467 576 aa10.42□□□□□ -0.74
SPT8YLR055C MSN2P33748 704 aa10.42□□□□□ -0.74
SPT8YLR055C YPT52P36018 234 aaKnown RBP10.42□□□□□ -0.74
SPT8YLR055C EMC3P36039 253 aa10.42□□□□□ -0.74
SPT8YLR055C SOL2P37262 315 aa10.42□□□□□ -0.74
SPT8YLR055C YBR137WP38276 179 aa10.42□□□□□ -0.74
SPT8YLR055C YTA6P40328 754 aa10.42□□□□□ -0.74
SPT8YLR055C AAD14P42884 376 aa10.42□□□□□ -0.74
SPT8YLR055C YJL049WP47048 450 aa10.42□□□□□ -0.74
SPT8YLR055C MDM34P53083 459 aa10.42□□□□□ -0.74
SPT8YLR055C RPL6AQ02326 176 aaKnown RBP10.42□□□□□ -0.74
SPT8YLR055C NUP116Q02630 1113 aa10.42□□□□□ -0.74
SPT8YLR055C COX20Q04935 205 aa10.42□□□□□ -0.74
SPT8YLR055C RRP9Q06506 573 aaKnown RBP10.42□□□□□ -0.74
SPT8YLR055C VPS36Q06696 566 aa10.42□□□□□ -0.74
SPT8YLR055C YLR036CQ07986 203 aa10.42□□□□□ -0.74
SPT8YLR055C NMD4Q12129 218 aa10.42□□□□□ -0.74
SPT8YLR055C RGT2Q12300 763 aa10.42□□□□□ -0.74
SPT8YLR055C YIM1P28625 365 aa10.42□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 116.9 ms