RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C GLE1Q12315 538 aa2.08□□□□□ -2.08
SHE2YKL130C PFK27Q12471 397 aaPredicted RBP2.08□□□□□ -2.08
SHE2YKL130C MET5P47169 1442 aa2.08□□□□□ -2.08
SHE2YKL130C YCF1P39109 1515 aaKnown RBP2.07□□□□□ -2.08
SHE2YKL130C HEM2P05373 342 aa2.07□□□□□ -2.08
SHE2YKL130C TPK3P05986 398 aa2.07□□□□□ -2.08
SHE2YKL130C GDH1P07262 454 aaKnown RBP2.07□□□□□ -2.08
SHE2YKL130C RPL20AP0CX23 172 aaKnown RBP2.07□□□□□ -2.08
SHE2YKL130C RPL20BP0CX24 172 aaPredicted RBP2.07□□□□□ -2.08
SHE2YKL130C RNA1P11745 407 aaKnown RBP2.07□□□□□ -2.08
SHE2YKL130C SPS22P25380 463 aa2.07□□□□□ -2.08
SHE2YKL130C YCR022CP25620 114 aa2.07□□□□□ -2.08
SHE2YKL130C ITR1P30605 584 aa2.07□□□□□ -2.08
SHE2YKL130C PTK1P36002 662 aaPredicted RBP2.07□□□□□ -2.08
SHE2YKL130C PMU1P36069 295 aa2.07□□□□□ -2.08
SHE2YKL130C YHR122WP38829 231 aa2.07□□□□□ -2.08
SHE2YKL130C RRT5P43607 289 aa2.07□□□□□ -2.08
SHE2YKL130C TOS3P43637 560 aa2.07□□□□□ -2.08
SHE2YKL130C YHC3P47040 408 aa2.07□□□□□ -2.08
SHE2YKL130C PMT5P52867 743 aa2.07□□□□□ -2.08
SHE2YKL130C YGL114WP53134 725 aa2.07□□□□□ -2.08
SHE2YKL130C RET3P53600 189 aa2.07□□□□□ -2.08
SHE2YKL130C IBD2P53892 351 aa2.07□□□□□ -2.08
SHE2YKL130C YNL146WP53906 100 aa2.07□□□□□ -2.08
SHE2YKL130C SPR6Q01684 191 aa2.07□□□□□ -2.08
SHE2YKL130C EGD1Q02642 157 aaKnown RBP2.07□□□□□ -2.08
SHE2YKL130C MSC3Q05812 728 aa2.07□□□□□ -2.08
SHE2YKL130C YLR297WQ05899 129 aa2.07□□□□□ -2.08
SHE2YKL130C ARR1Q06596 294 aa2.07□□□□□ -2.08
SHE2YKL130C NCA2Q12374 616 aa2.07□□□□□ -2.08
SHE2YKL130C RAD61Q99359 647 aa2.07□□□□□ -2.08
SHE2YKL130C VPS63O13549 108 aa2.06□□□□□ -2.08
SHE2YKL130C MRS3P10566 314 aa2.06□□□□□ -2.08
SHE2YKL130C MAS2P11914 482 aa2.06□□□□□ -2.08
SHE2YKL130C GAL3P13045 520 aa2.06□□□□□ -2.08
SHE2YKL130C CLN3P13365 580 aa2.06□□□□□ -2.08
SHE2YKL130C OM45P16547 393 aa2.06□□□□□ -2.08
SHE2YKL130C SAM2P19358 384 aaKnown RBP2.06□□□□□ -2.08
SHE2YKL130C DBP3P20447 523 aaKnown RBP2.06□□□□□ -2.08
SHE2YKL130C MRPL8P22353 238 aa2.06□□□□□ -2.08
SHE2YKL130C HXT2P23585 541 aa2.06□□□□□ -2.08
SHE2YKL130C PUT3P25502 979 aaPredicted RBP2.06□□□□□ -2.08
SHE2YKL130C MNS1P32906 549 aa2.06□□□□□ -2.08
SHE2YKL130C LOS1P33418 1100 aaPredicted RBP2.06□□□□□ -2.08
SHE2YKL130C RIB5P38145 238 aa2.06□□□□□ -2.08
SHE2YKL130C MTC4P38335 694 aaKnown RBP2.06□□□□□ -2.08
SHE2YKL130C VPS45P38932 577 aa2.06□□□□□ -2.08
SHE2YKL130C ALP1P38971 573 aa2.06□□□□□ -2.08
SHE2YKL130C END3P39013 349 aa2.06□□□□□ -2.08
SHE2YKL130C MNN9P39107 395 aaKnown RBP2.06□□□□□ -2.08
SHE2YKL130C LCP5P40079 357 aaPredicted RBP2.06□□□□□ -2.08
SHE2YKL130C LYS12P40495 371 aaKnown RBP2.06□□□□□ -2.08
SHE2YKL130C YFR018CP43599 363 aa2.06□□□□□ -2.08
SHE2YKL130C SFH5P47008 294 aa2.06□□□□□ -2.08
SHE2YKL130C AZR1P50080 613 aa2.06□□□□□ -2.08
SHE2YKL130C YGR117CP53270 476 aa2.06□□□□□ -2.08
SHE2YKL130C ABZ2Q03266 374 aa2.06□□□□□ -2.08
SHE2YKL130C YMR111CQ04461 462 aaPredicted RBP2.06□□□□□ -2.08
SHE2YKL130C BCH1Q05029 724 aa2.06□□□□□ -2.08
SHE2YKL130C YPR078CQ06813 372 aa2.06□□□□□ -2.08
SHE2YKL130C ASA1Q06822 443 aa2.06□□□□□ -2.08
SHE2YKL130C NDE2Q07500 545 aa2.06□□□□□ -2.08
SHE2YKL130C YOL075CQ08234 1294 aa2.06□□□□□ -2.08
SHE2YKL130C AYT1Q12226 474 aa2.06□□□□□ -2.08
SHE2YKL130C YOR012WQ12351 137 aa2.06□□□□□ -2.08
SHE2YKL130C YOP1Q12402 180 aa2.06□□□□□ -2.08
SHE2YKL130C APC2Q12440 853 aa2.06□□□□□ -2.08
SHE2YKL130C RRP12Q12754 1228 aaKnown RBP2.06□□□□□ -2.08
SHE2YKL130C FSH3Q99369 266 aa2.06□□□□□ -2.08
SHE2YKL130C DRS2P39524 1355 aa2.06□□□□□ -2.08
SHE2YKL130C UFD4P33202 1483 aa2.06□□□□□ -2.08
SHE2YKL130C GEA2P39993 1459 aaKnown RBP2.06□□□□□ -2.08
SHE2YKL130C PAB1P04147 577 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08 RIP-Chip
SHE2YKL130C RPL15AP05748 204 aaKnown RBP2.05□□□□□ -2.08
SHE2YKL130C YLL053CP0CD98 152 aa2.05□□□□□ -2.08
SHE2YKL130C PUT4P15380 627 aa2.05□□□□□ -2.08
SHE2YKL130C SLY1P22213 666 aa2.05□□□□□ -2.08
SHE2YKL130C DBR1P24309 405 aaKnown RBP2.05□□□□□ -2.08
SHE2YKL130C YCL068CP25593 260 aa2.05□□□□□ -2.08
SHE2YKL130C AGA1P32323 725 aa2.05□□□□□ -2.08
SHE2YKL130C YEF1P32622 495 aa2.05□□□□□ -2.08
SHE2YKL130C PPQ1P32945 549 aa2.05□□□□□ -2.08
SHE2YKL130C RIB7P33312 244 aa2.05□□□□□ -2.08
SHE2YKL130C MCR1P36060 302 aaKnown RBP2.05□□□□□ -2.08
SHE2YKL130C NAT2P37293 288 aa2.05□□□□□ -2.08
SHE2YKL130C MIX23P38162 196 aa2.05□□□□□ -2.08
SHE2YKL130C YBP1P38315 674 aa2.05□□□□□ -2.08
SHE2YKL130C PRP39P39682 629 aaKnown RBP2.05□□□□□ -2.08
SHE2YKL130C RPH1P39956 796 aa2.05□□□□□ -2.08
SHE2YKL130C YMR134WP40207 237 aa2.05□□□□□ -2.08
SHE2YKL130C YJL213WP40896 331 aa2.05□□□□□ -2.08
SHE2YKL130C YDL186WP48568 277 aa2.05□□□□□ -2.08
SHE2YKL130C YGL242CP53066 181 aa2.05□□□□□ -2.08
SHE2YKL130C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
SHE2YKL130C CCE1Q03702 353 aa2.05□□□□□ -2.08
SHE2YKL130C AIM33Q04516 312 aa2.05□□□□□ -2.08
SHE2YKL130C RAX1Q08760 435 aa2.05□□□□□ -2.08
SHE2YKL130C SNX3Q08826 162 aaKnown RBP2.05□□□□□ -2.08
SHE2YKL130C SET6Q12529 373 aa2.05□□□□□ -2.08
SHE2YKL130C RGS2Q99188 309 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms