RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W TRM732Q03496 1420 aa2□□□□□ -2.09
MSL1YIR009W SOD1P00445 154 aaKnown RBP1.99□□□□□ -2.09
MSL1YIR009W MAS1P10507 462 aa1.99□□□□□ -2.09
MSL1YIR009W PUT4P15380 627 aa1.99□□□□□ -2.09
MSL1YIR009W NIP1P32497 812 aaKnown RBP1.99□□□□□ -2.09
MSL1YIR009W SPR1P32603 445 aa1.99□□□□□ -2.09
MSL1YIR009W SKN1P33336 771 aa1.99□□□□□ -2.09
MSL1YIR009W ALP1P38971 573 aa1.99□□□□□ -2.09
MSL1YIR009W END3P39013 349 aa1.99□□□□□ -2.09
MSL1YIR009W AIM20P40451 204 aa1.99□□□□□ -2.09
MSL1YIR009W GWT1P47026 490 aa1.99□□□□□ -2.09
MSL1YIR009W AVT4P50944 713 aa1.99□□□□□ -2.09
MSL1YIR009W YGL114WP53134 725 aa1.99□□□□□ -2.09
MSL1YIR009W YNL146WP53906 100 aa1.99□□□□□ -2.09
MSL1YIR009W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
MSL1YIR009W STD1Q02794 444 aa1.99□□□□□ -2.09
MSL1YIR009W MMT1Q03218 510 aa1.99□□□□□ -2.09
MSL1YIR009W TAF12Q03761 539 aa1.99□□□□□ -2.09
MSL1YIR009W MGR3Q04472 501 aa1.99□□□□□ -2.09
MSL1YIR009W MHR1Q06630 226 aa1.99□□□□□ -2.09
MSL1YIR009W ASA1Q06822 443 aa1.99□□□□□ -2.09
MSL1YIR009W PKH2Q12236 1081 aaKnown RBP1.99□□□□□ -2.09
MSL1YIR009W RNH203Q12338 110 aa1.99□□□□□ -2.09
MSL1YIR009W ORT1Q12375 292 aa1.99□□□□□ -2.09
MSL1YIR009W SPO24Q3E752 67 aa1.99□□□□□ -2.09
MSL1YIR009W CHD1P32657 1468 aa1.99□□□□□ -2.09
MSL1YIR009W TEF1P02994 458 aaKnown RBP1.98□□□□□ -2.09
MSL1YIR009W CBP2P03874 630 aaPredicted RBP1.98□□□□□ -2.09
MSL1YIR009W ARG4P04076 463 aaPredicted RBP1.98□□□□□ -2.09
MSL1YIR009W TPK3P05986 398 aa1.98□□□□□ -2.09
MSL1YIR009W YLL053CP0CD98 152 aa1.98□□□□□ -2.09
MSL1YIR009W OM45P16547 393 aa1.98□□□□□ -2.09
MSL1YIR009W SPO12P17123 173 aa1.98□□□□□ -2.09
MSL1YIR009W ISY1P21374 235 aaPredicted RBP1.98□□□□□ -2.09
MSL1YIR009W HXT2P23585 541 aa1.98□□□□□ -2.09
MSL1YIR009W CTR86P25355 563 aa1.98□□□□□ -2.09
MSL1YIR009W LSB5P25369 354 aa1.98□□□□□ -2.09
MSL1YIR009W DEG1P31115 442 aaKnown RBP1.98□□□□□ -2.09
MSL1YIR009W COX13P32799 129 aa1.98□□□□□ -2.09
MSL1YIR009W DOA1P36037 715 aa1.98□□□□□ -2.09
MSL1YIR009W MRPL40P36534 297 aa1.98□□□□□ -2.09
MSL1YIR009W YAL037WP39728 267 aa1.98□□□□□ -2.09
MSL1YIR009W ATM1P40416 690 aa1.98□□□□□ -2.09
MSL1YIR009W YPS6P40583 537 aa1.98□□□□□ -2.09
MSL1YIR009W YGR210CP42942 411 aa1.98□□□□□ -2.09
MSL1YIR009W LAM5P43560 674 aa1.98□□□□□ -2.09
MSL1YIR009W TIS11P47977 285 aa1.98□□□□□ -2.09
MSL1YIR009W PMT5P52867 743 aa1.98□□□□□ -2.09
MSL1YIR009W YGL039WP53183 348 aaKnown RBP1.98□□□□□ -2.09
MSL1YIR009W POP6P53218 158 aa1.98□□□□□ -2.09
MSL1YIR009W RTT102P53330 157 aa1.98□□□□□ -2.09
MSL1YIR009W ARP5P53946 755 aa1.98□□□□□ -2.09
MSL1YIR009W ERV25P54837 211 aaKnown RBP1.98□□□□□ -2.09
MSL1YIR009W PIR3Q03180 325 aa1.98□□□□□ -2.09
MSL1YIR009W RSN1Q03516 953 aa1.98□□□□□ -2.09
MSL1YIR009W SMP3Q04174 516 aa1.98□□□□□ -2.09
MSL1YIR009W RRB1Q04225 511 aaKnown RBP1.98□□□□□ -2.09
MSL1YIR009W AIM33Q04516 312 aa1.98□□□□□ -2.09
MSL1YIR009W YLR297WQ05899 129 aa1.98□□□□□ -2.09
MSL1YIR009W VPS74Q06385 345 aa1.98□□□□□ -2.09
MSL1YIR009W RRP9Q06506 573 aaKnown RBP1.98□□□□□ -2.09
MSL1YIR009W MRPL35Q06678 367 aa1.98□□□□□ -2.09
MSL1YIR009W MUM3Q08750 479 aa1.98□□□□□ -2.09
MSL1YIR009W TMS1Q12116 473 aa1.98□□□□□ -2.09
MSL1YIR009W ERV2Q12284 196 aa1.98□□□□□ -2.09
MSL1YIR009W ATG34Q12292 412 aa1.98□□□□□ -2.09
MSL1YIR009W VPS15P22219 1454 aa1.98□□□□□ -2.09
MSL1YIR009W TOR1P35169 2470 aa1.98□□□□□ -2.09
MSL1YIR009W ATG2P53855 1592 aa1.98□□□□□ -2.09
MSL1YIR009W RPL12AP0CX53 165 aaKnown RBP1.97□□□□□ -2.09
MSL1YIR009W RPL12BP0CX54 165 aa1.97□□□□□ -2.09
MSL1YIR009W GAL3P13045 520 aa1.97□□□□□ -2.09
MSL1YIR009W THR4P16120 514 aaKnown RBP1.97□□□□□ -2.09
MSL1YIR009W DBP3P20447 523 aaKnown RBP1.97□□□□□ -2.09
MSL1YIR009W SLY1P22213 666 aa1.97□□□□□ -2.09
MSL1YIR009W DBR1P24309 405 aaKnown RBP1.97□□□□□ -2.09
MSL1YIR009W MSK1P32048 576 aa1.97□□□□□ -2.09
MSL1YIR009W YBL059WP34224 193 aa1.97□□□□□ -2.09
MSL1YIR009W ATP3P38077 311 aaKnown RBP1.97□□□□□ -2.09
MSL1YIR009W SSO2P39926 295 aa1.97□□□□□ -2.09
MSL1YIR009W PNC1P53184 216 aaKnown RBP1.97□□□□□ -2.09
MSL1YIR009W YLR152CP54072 576 aa1.97□□□□□ -2.09
MSL1YIR009W SPR6Q01684 191 aa1.97□□□□□ -2.09
MSL1YIR009W ELP3Q02908 557 aaKnown RBP1.97□□□□□ -2.09
MSL1YIR009W CAB5Q03941 241 aa1.97□□□□□ -2.09
MSL1YIR009W VPS20Q04272 221 aa1.97□□□□□ -2.09
MSL1YIR009W URC2Q04411 772 aa1.97□□□□□ -2.09
MSL1YIR009W CUR1Q06469 252 aa1.97□□□□□ -2.09
MSL1YIR009W YLR413WQ06689 675 aa1.97□□□□□ -2.09
MSL1YIR009W LDS2Q08218 356 aa1.97□□□□□ -2.09
MSL1YIR009W AAD15Q08361 143 aa1.97□□□□□ -2.09
MSL1YIR009W TIM18Q08749 192 aa1.97□□□□□ -2.09
MSL1YIR009W YPL199CQ08954 240 aa1.97□□□□□ -2.09
MSL1YIR009W RUP1Q12242 671 aa1.97□□□□□ -2.09
MSL1YIR009W RMD5Q12508 421 aa1.97□□□□□ -2.09
MSL1YIR009W FSH3Q99369 266 aa1.97□□□□□ -2.09
MSL1YIR009W STE2D6VTK4 431 aa1.96□□□□□ -2.1
MSL1YIR009W CDC37P06101 506 aaKnown RBP1.96□□□□□ -2.1
MSL1YIR009W ATP1P07251 545 aaKnown RBP1.96□□□□□ -2.1
MSL1YIR009W RNR2P09938 399 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms