RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C UAF30Q08747 228 aa3.21□□□□□ -1.9
CUP1-2YHR055C YCR024C-BQ3E7Z8 88 aa3.21□□□□□ -1.9
CUP1-2YHR055C NAG1Q8TGN9 163 aa3.21□□□□□ -1.9
CUP1-2YHR055C PSK1P31374 1356 aa3.21□□□□□ -1.9
CUP1-2YHR055C PAB1P04147 577 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9 RIP-Chip
CUP1-2YHR055C CDC50P25656 391 aa3.2□□□□□ -1.9
CUP1-2YHR055C NRP1P32770 719 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
CUP1-2YHR055C PXA2P34230 853 aa3.2□□□□□ -1.9
CUP1-2YHR055C OM14P38325 134 aa3.2□□□□□ -1.9
CUP1-2YHR055C ATM1P40416 690 aa3.2□□□□□ -1.9
CUP1-2YHR055C BUD27P43573 796 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
CUP1-2YHR055C MKC7P53379 596 aa3.2□□□□□ -1.9
CUP1-2YHR055C VHS1Q03785 461 aa3.2□□□□□ -1.9
CUP1-2YHR055C GPM3Q12326 303 aa3.2□□□□□ -1.9
CUP1-2YHR055C MPE1P35728 441 aaKnown RBP3.19□□□□□ -1.9
CUP1-2YHR055C DOA1P36037 715 aa3.19□□□□□ -1.9
CUP1-2YHR055C GPI16P38875 610 aa3.19□□□□□ -1.9
CUP1-2YHR055C ROG1P53118 685 aa3.19□□□□□ -1.9
CUP1-2YHR055C YPR091CQ06833 770 aa3.19□□□□□ -1.9
CUP1-2YHR055C COX4P04037 155 aa3.18□□□□□ -1.9
CUP1-2YHR055C TPK3P05986 398 aa3.18□□□□□ -1.9
CUP1-2YHR055C SSC1P0CS90 654 aaKnown RBP3.18□□□□□ -1.9
CUP1-2YHR055C ARF1P11076 181 aaKnown RBP3.18□□□□□ -1.9
CUP1-2YHR055C VMA8P32610 256 aaKnown RBP3.18□□□□□ -1.9
CUP1-2YHR055C QDR3P38227 689 aa3.18□□□□□ -1.9
CUP1-2YHR055C PTI1P39927 425 aaPredicted RBP3.18□□□□□ -1.9
CUP1-2YHR055C PAC11P40960 533 aa3.18□□□□□ -1.9
CUP1-2YHR055C STE24P47154 453 aa3.18□□□□□ -1.9
CUP1-2YHR055C COS1P53822 381 aa3.18□□□□□ -1.9
CUP1-2YHR055C PRP3Q03338 469 aaPredicted RBP3.18□□□□□ -1.9
CUP1-2YHR055C GYL1Q04322 720 aa3.18□□□□□ -1.9
CUP1-2YHR055C YOP1Q12402 180 aa3.18□□□□□ -1.9
CUP1-2YHR055C MCR1P36060 302 aaKnown RBP3.17□□□□□ -1.9
CUP1-2YHR055C ANR2P36090 516 aaPredicted RBP3.17□□□□□ -1.9
CUP1-2YHR055C ECM8P38246 354 aa3.17□□□□□ -1.9
CUP1-2YHR055C YER186CP40101 306 aa3.17□□□□□ -1.9
CUP1-2YHR055C AIP1P46680 615 aaKnown RBP3.17□□□□□ -1.9
CUP1-2YHR055C YML6P51998 286 aa3.17□□□□□ -1.9
CUP1-2YHR055C MRPS16Q02608 121 aa3.17□□□□□ -1.9
CUP1-2YHR055C YDL114WQ07530 308 aa3.17□□□□□ -1.9
CUP1-2YHR055C FCY22Q12119 530 aa3.17□□□□□ -1.9
CUP1-2YHR055C RNH203Q12338 110 aa3.17□□□□□ -1.9
CUP1-2YHR055C OPI3P05375 206 aa3.16□□□□□ -1.9
CUP1-2YHR055C MRPS9P38120 278 aa3.16□□□□□ -1.9
CUP1-2YHR055C GPI18P38211 433 aa3.16□□□□□ -1.9
CUP1-2YHR055C SKI8Q02793 397 aaPredicted RBP3.16□□□□□ -1.9
CUP1-2YHR055C YDR541CQ03049 344 aa3.16□□□□□ -1.9
CUP1-2YHR055C MFG1Q07684 458 aa3.16□□□□□ -1.9
CUP1-2YHR055C DNL4Q08387 944 aaPredicted RBP3.16□□□□□ -1.9
CUP1-2YHR055C SPE3Q12074 293 aaKnown RBP3.16□□□□□ -1.9
CUP1-2YHR055C PCL9Q12477 304 aa3.16□□□□□ -1.9
CUP1-2YHR055C RPL12AP0CX53 165 aaKnown RBP3.15□□□□□ -1.91
CUP1-2YHR055C RPL12BP0CX54 165 aa3.15□□□□□ -1.91
CUP1-2YHR055C ZRC1P20107 442 aa3.15□□□□□ -1.91
CUP1-2YHR055C YSC83P32792 385 aa3.15□□□□□ -1.91
CUP1-2YHR055C GEP4P38812 185 aa3.15□□□□□ -1.91
CUP1-2YHR055C KTR6P54070 446 aa3.15□□□□□ -1.91
CUP1-2YHR055C YMR010WQ03687 405 aa3.15□□□□□ -1.91
CUP1-2YHR055C ECM11Q04110 302 aa3.15□□□□□ -1.91
CUP1-2YHR055C SXM1Q04175 944 aaKnown RBP3.15□□□□□ -1.91
CUP1-2YHR055C ECM7Q06200 448 aa3.15□□□□□ -1.91
CUP1-2YHR055C YPQ1Q12010 308 aa3.15□□□□□ -1.91
CUP1-2YHR055C YDL012CQ12489 107 aa3.15□□□□□ -1.91
CUP1-2YHR055C FOL3Q12676 427 aaPredicted RBP3.15□□□□□ -1.91
CUP1-2YHR055C DEP1P31385 405 aa3.14□□□□□ -1.91
CUP1-2YHR055C GPX2P38143 162 aa3.14□□□□□ -1.91
CUP1-2YHR055C PFS1P38872 237 aa3.14□□□□□ -1.91
CUP1-2YHR055C TIM17P39515 158 aa3.14□□□□□ -1.91
CUP1-2YHR055C SEO1P39709 593 aa3.14□□□□□ -1.91
CUP1-2YHR055C YJL055WP47044 245 aa3.14□□□□□ -1.91
CUP1-2YHR055C VPS9P54787 451 aa3.14□□□□□ -1.91
CUP1-2YHR055C URC2Q04411 772 aa3.14□□□□□ -1.91
CUP1-2YHR055C NDL1Q06568 189 aa3.14□□□□□ -1.91
CUP1-2YHR055C ASA1Q06822 443 aa3.14□□□□□ -1.91
CUP1-2YHR055C PRB1P09232 635 aa3.13□□□□□ -1.91
CUP1-2YHR055C FUN26P31381 517 aa3.13□□□□□ -1.91
CUP1-2YHR055C TIR2P33890 251 aa3.13□□□□□ -1.91
CUP1-2YHR055C KAP104P38217 918 aaKnown RBP3.13□□□□□ -1.91
CUP1-2YHR055C IGD1P43598 195 aa3.13□□□□□ -1.91
CUP1-2YHR055C YPS5P53057 165 aa3.13□□□□□ -1.91
CUP1-2YHR055C RTT102P53330 157 aa3.13□□□□□ -1.91
CUP1-2YHR055C ERO1Q03103 563 aa3.13□□□□□ -1.91
CUP1-2YHR055C MCH1Q07376 486 aa3.13□□□□□ -1.91
CUP1-2YHR055C AAD15Q08361 143 aa3.13□□□□□ -1.91
CUP1-2YHR055C HMS1Q12398 434 aa3.13□□□□□ -1.91
CUP1-2YHR055C YDL199CQ12407 687 aa3.13□□□□□ -1.91
CUP1-2YHR055C YBL111CQ3E7Y5 667 aa3.13□□□□□ -1.91
CUP1-2YHR055C MEX67Q99257 599 aaKnown RBP3.13□□□□□ -1.91
CUP1-2YHR055C CBP6P07253 162 aaPredicted RBP3.12□□□□□ -1.91
CUP1-2YHR055C TOS2P50078 622 aa3.12□□□□□ -1.91
CUP1-2YHR055C PMT5P52867 743 aa3.12□□□□□ -1.91
CUP1-2YHR055C YGL262WP53054 175 aa3.12□□□□□ -1.91
CUP1-2YHR055C RRN9P53437 365 aa3.12□□□□□ -1.91
CUP1-2YHR055C LDS2Q08218 356 aa3.12□□□□□ -1.91
CUP1-2YHR055C RPN5Q12250 445 aaKnown RBP3.12□□□□□ -1.91
CUP1-2YHR055C CCH1P50077 2039 aa3.11□□□□□ -1.91
CUP1-2YHR055C STE7P06784 515 aa3.11□□□□□ -1.91
CUP1-2YHR055C LSM12P38828 187 aaKnown RBP3.11□□□□□ -1.91
CUP1-2YHR055C MNL1P38888 796 aa3.11□□□□□ -1.91
CUP1-2YHR055C LCB2P40970 561 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms