RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W NFS1P25374 497 aa8.15□□□□□ -1.1
CPD1YGR247W DMC1P25453 334 aa8.15□□□□□ -1.1
CPD1YGR247W FRE2P36033 711 aa8.15□□□□□ -1.1
CPD1YGR247W TDP1P38319 544 aa8.15□□□□□ -1.1
CPD1YGR247W ANS1P38832 159 aa8.15□□□□□ -1.1
CPD1YGR247W YJL068CP40363 299 aa8.15□□□□□ -1.1
CPD1YGR247W PAC10P48363 199 aa8.15□□□□□ -1.1
CPD1YGR247W YLR036CQ07986 203 aa8.15□□□□□ -1.1
CPD1YGR247W CAR2P07991 424 aaKnown RBP8.14□□□□□ -1.11
CPD1YGR247W UNG1P12887 359 aa8.14□□□□□ -1.11
CPD1YGR247W OAF3P36023 863 aa8.14□□□□□ -1.11
CPD1YGR247W YBL029WP38201 376 aa8.14□□□□□ -1.11
CPD1YGR247W YHR177WP38867 453 aa8.14□□□□□ -1.11
CPD1YGR247W PTH1P38876 190 aaKnown RBP8.14□□□□□ -1.11
CPD1YGR247W YJL193WP39542 402 aa8.14□□□□□ -1.11
CPD1YGR247W SEN34P39707 275 aa8.14□□□□□ -1.11
CPD1YGR247W YER010CP40011 234 aa8.14□□□□□ -1.11
CPD1YGR247W ALG5P40350 334 aa8.14□□□□□ -1.11
CPD1YGR247W YNR040WP53736 256 aa8.14□□□□□ -1.11
CPD1YGR247W RHO5P53879 331 aaKnown RBP8.14□□□□□ -1.11
CPD1YGR247W FAR8Q05040 523 aa8.14□□□□□ -1.11
CPD1YGR247W FMP40Q08968 688 aaPredicted RBP8.14□□□□□ -1.11
CPD1YGR247W SAS5Q99314 248 aa8.14□□□□□ -1.11
CPD1YGR247W AIM17P23180 465 aaKnown RBP8.13□□□□□ -1.11
CPD1YGR247W YBR032WP38223 100 aa8.13□□□□□ -1.11
CPD1YGR247W EXO84P38261 753 aa8.13□□□□□ -1.11
CPD1YGR247W NSG1P38837 291 aa8.13□□□□□ -1.11
CPD1YGR247W LSG1P53145 640 aaKnown RBP8.13□□□□□ -1.11
CPD1YGR247W SOK2P53438 785 aaPredicted RBP8.13□□□□□ -1.11
CPD1YGR247W CUS2P53830 285 aaPredicted RBP8.13□□□□□ -1.11
CPD1YGR247W MOT3P54785 490 aaKnown RBP8.13□□□□□ -1.11
CPD1YGR247W REX2P54964 269 aaKnown RBP8.13□□□□□ -1.11
CPD1YGR247W EMG1Q06287 252 aaKnown RBP8.13□□□□□ -1.11
CPD1YGR247W YLR413WQ06689 675 aa8.13□□□□□ -1.11
CPD1YGR247W YEH2Q07950 538 aa8.13□□□□□ -1.11
CPD1YGR247W AIR2Q12476 344 aaKnown RBP8.13□□□□□ -1.11
CPD1YGR247W GAL3P13045 520 aa8.12□□□□□ -1.11
CPD1YGR247W KSS1P14681 368 aa8.12□□□□□ -1.11
CPD1YGR247W PDX1P16451 410 aa8.12□□□□□ -1.11
CPD1YGR247W YCL049CP25577 312 aa8.12□□□□□ -1.11
CPD1YGR247W NGG1P32494 702 aa8.12□□□□□ -1.11
CPD1YGR247W NUP2P32499 720 aa8.12□□□□□ -1.11
CPD1YGR247W YPT7P32939 208 aa8.12□□□□□ -1.11
CPD1YGR247W ECM10P39987 644 aa8.12□□□□□ -1.11
CPD1YGR247W YDR476CQ03362 224 aa8.12□□□□□ -1.11
CPD1YGR247W INP1Q03694 420 aa8.12□□□□□ -1.11
CPD1YGR247W HNT3Q08702 217 aa8.12□□□□□ -1.11
CPD1YGR247W PFK27Q12471 397 aaPredicted RBP8.12□□□□□ -1.11
CPD1YGR247W SNF8Q12483 233 aa8.12□□□□□ -1.11
CPD1YGR247W FOL3Q12676 427 aaPredicted RBP8.12□□□□□ -1.11
CPD1YGR247W YBL029C-AQ3E756 94 aa8.12□□□□□ -1.11
CPD1YGR247W HEM4P06174 275 aa8.11□□□□□ -1.11
CPD1YGR247W CBS1P14066 229 aa8.11□□□□□ -1.11
CPD1YGR247W NPP1P25353 742 aa8.11□□□□□ -1.11
CPD1YGR247W TOD6P34219 525 aa8.11□□□□□ -1.11
CPD1YGR247W PTC1P35182 281 aa8.11□□□□□ -1.11
CPD1YGR247W YHL037CP38733 133 aa8.11□□□□□ -1.11
CPD1YGR247W VPS41P38959 992 aa8.11□□□□□ -1.11
CPD1YGR247W FAA2P39518 744 aa8.11□□□□□ -1.11
CPD1YGR247W GAB1P41733 394 aa8.11□□□□□ -1.11
CPD1YGR247W MAL12P53341 584 aa8.11□□□□□ -1.11
CPD1YGR247W YHC1Q05900 231 aaKnown RBP8.11□□□□□ -1.11
CPD1YGR247W ARR1Q06596 294 aa8.11□□□□□ -1.11
CPD1YGR247W SGT1Q08446 395 aa8.11□□□□□ -1.11
CPD1YGR247W RSA1Q08932 381 aa8.11□□□□□ -1.11
CPD1YGR247W SWM1Q12379 170 aa8.11□□□□□ -1.11
CPD1YGR247W CTA1P15202 515 aa8.1□□□□□ -1.11
CPD1YGR247W ARN1P38731 627 aa8.1□□□□□ -1.11
CPD1YGR247W SMK1P41808 388 aa8.1□□□□□ -1.11
CPD1YGR247W TIM10P87108 93 aa8.1□□□□□ -1.11
CPD1YGR247W YMR010WQ03687 405 aa8.1□□□□□ -1.11
CPD1YGR247W NCA2Q12374 616 aa8.1□□□□□ -1.11
CPD1YGR247W NOT5Q12514 560 aaPredicted RBP8.1□□□□□ -1.11
CPD1YGR247W YKL018C-AQ3E7A7 99 aa8.1□□□□□ -1.11
CPD1YGR247W BLM10P43583 2143 aa8.09□□□□□ -1.11
CPD1YGR247W CAR1P00812 333 aaKnown RBP8.09□□□□□ -1.11
CPD1YGR247W ZWF1P11412 505 aaKnown RBP8.09□□□□□ -1.11
CPD1YGR247W RNA1P11745 407 aaKnown RBP8.09□□□□□ -1.11
CPD1YGR247W RAP1P11938 827 aa8.09□□□□□ -1.11
CPD1YGR247W PDA1P16387 420 aaKnown RBP8.09□□□□□ -1.11
CPD1YGR247W RPT5P33297 434 aaKnown RBP8.09□□□□□ -1.11
CPD1YGR247W ATG14P38270 344 aa8.09□□□□□ -1.11
CPD1YGR247W SHO1P40073 367 aa8.09□□□□□ -1.11
CPD1YGR247W GAT2P40209 560 aa8.09□□□□□ -1.11
CPD1YGR247W MSY1P48527 492 aa8.09□□□□□ -1.11
CPD1YGR247W OGG1P53397 376 aaPredicted RBP8.09□□□□□ -1.11
CPD1YGR247W NUP116Q02630 1113 aa8.09□□□□□ -1.11
CPD1YGR247W RIM13Q03792 727 aa8.09□□□□□ -1.11
CPD1YGR247W URC2Q04411 772 aa8.09□□□□□ -1.11
CPD1YGR247W NAT4Q04751 285 aa8.09□□□□□ -1.11
CPD1YGR247W MRL1Q06815 381 aa8.09□□□□□ -1.11
CPD1YGR247W YDL211CQ12121 372 aa8.09□□□□□ -1.11
CPD1YGR247W HTS1P07263 546 aaKnown RBP8.08□□□□□ -1.12
CPD1YGR247W YCR051WP25631 222 aa8.08□□□□□ -1.12
CPD1YGR247W EHD3P28817 500 aa8.08□□□□□ -1.12
CPD1YGR247W SSE1P32589 693 aaKnown RBP8.08□□□□□ -1.12
CPD1YGR247W TEF4P36008 412 aaKnown RBP8.08□□□□□ -1.12
CPD1YGR247W PRS3P38689 320 aaKnown RBP8.08□□□□□ -1.12
CPD1YGR247W LEM3P42838 414 aa8.08□□□□□ -1.12
CPD1YGR247W MRM2P53123 320 aa8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 102.3 ms