RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C ACO1P19414 778 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
SPT4YGR063C UTR1P21373 530 aa3.34□□□□□ -1.87
SPT4YGR063C CPR4P25334 318 aa3.34□□□□□ -1.87
SPT4YGR063C RSA4P25382 515 aaKnown RBP3.34□□□□□ -1.87
SPT4YGR063C DCC1P25559 380 aa3.34□□□□□ -1.87
SPT4YGR063C BEM1P29366 551 aa3.34□□□□□ -1.87
SPT4YGR063C ERG9P29704 444 aa3.34□□□□□ -1.87
SPT4YGR063C SNC1P31109 117 aa3.34□□□□□ -1.87
SPT4YGR063C RNP1P32385 249 aa3.34□□□□□ -1.87
SPT4YGR063C PEX2P32800 271 aa3.34□□□□□ -1.87
SPT4YGR063C LHP1P33399 275 aaKnown RBP3.34□□□□□ -1.87
SPT4YGR063C WBP1P33767 430 aaKnown RBP3.34□□□□□ -1.87
SPT4YGR063C CTF13P35203 478 aa3.34□□□□□ -1.87
SPT4YGR063C RMA1P36001 430 aaKnown RBP3.34□□□□□ -1.87
SPT4YGR063C YNK1P36010 153 aaKnown RBP3.34□□□□□ -1.87
SPT4YGR063C IRS4P36115 615 aaKnown RBP3.34□□□□□ -1.87
SPT4YGR063C APE3P37302 537 aaKnown RBP3.34□□□□□ -1.87
SPT4YGR063C RIB1P38066 345 aa3.34□□□□□ -1.87
SPT4YGR063C POL12P38121 705 aaPredicted RBP3.34□□□□□ -1.87
SPT4YGR063C AIM46P38885 310 aa3.34□□□□□ -1.87
SPT4YGR063C FAD1P38913 306 aa3.34□□□□□ -1.87
SPT4YGR063C YAR028WP39548 234 aa3.34□□□□□ -1.87
SPT4YGR063C PRM9P39551 298 aa3.34□□□□□ -1.87
SPT4YGR063C ISC1P40015 477 aaKnown RBP3.34□□□□□ -1.87
SPT4YGR063C YEN1P40028 759 aa3.34□□□□□ -1.87
SPT4YGR063C MND2P40577 368 aa3.34□□□□□ -1.87
SPT4YGR063C LCB2P40970 561 aa3.34□□□□□ -1.87
SPT4YGR063C RPL10P41805 221 aaKnown RBP3.34□□□□□ -1.87
SPT4YGR063C SNG1P46950 547 aa3.34□□□□□ -1.87
SPT4YGR063C PHO86P46956 311 aa3.34□□□□□ -1.87
SPT4YGR063C BIT61P47041 543 aa3.34□□□□□ -1.87
SPT4YGR063C AIM22P47051 409 aa3.34□□□□□ -1.87
SPT4YGR063C YGR042WP53227 271 aa3.34□□□□□ -1.87
SPT4YGR063C IDP3P53982 420 aaKnown RBP3.34□□□□□ -1.87
SPT4YGR063C ROD1Q02805 837 aa3.34□□□□□ -1.87
SPT4YGR063C YMR034CQ05131 434 aaPredicted RBP3.34□□□□□ -1.87
SPT4YGR063C YLR345WQ06137 509 aa3.34□□□□□ -1.87
SPT4YGR063C GPI11Q06636 219 aa3.34□□□□□ -1.87
SPT4YGR063C ECM30Q06673 1274 aa3.34□□□□□ -1.87
SPT4YGR063C RFU1Q08003 200 aa3.34□□□□□ -1.87
SPT4YGR063C BUD20Q08004 166 aaPredicted RBP3.34□□□□□ -1.87
SPT4YGR063C MED7Q08278 222 aa3.34□□□□□ -1.87
SPT4YGR063C YLR126CQ12288 251 aa3.34□□□□□ -1.87
SPT4YGR063C YOP1Q12402 180 aa3.34□□□□□ -1.87
SPT4YGR063C AGC1Q12482 902 aa3.34□□□□□ -1.87
SPT4YGR063C SFG1Q12507 346 aa3.34□□□□□ -1.87
SPT4YGR063C YGL194C-AQ2V2P6 80 aa3.34□□□□□ -1.87
SPT4YGR063C EFG1Q3E705 233 aaKnown RBP3.34□□□□□ -1.87
SPT4YGR063C HBN1Q96VH4 193 aa3.34□□□□□ -1.87
SPT4YGR063C SRN2Q99176 213 aa3.34□□□□□ -1.87
SPT4YGR063C RIF1P29539 1916 aa3.34□□□□□ -1.88
SPT4YGR063C THP2O13539 261 aaKnown RBP3.33□□□□□ -1.88
SPT4YGR063C TY1A-DR4O74302 440 aa3.33□□□□□ -1.88
SPT4YGR063C INH1P01097 85 aa3.33□□□□□ -1.88
SPT4YGR063C ADE4P04046 510 aaKnown RBP3.33□□□□□ -1.88
SPT4YGR063C AAC1P04710 309 aa3.33□□□□□ -1.88
SPT4YGR063C ATP4P05626 244 aa3.33□□□□□ -1.88
SPT4YGR063C ATP5P09457 212 aa3.33□□□□□ -1.88
SPT4YGR063C TY1A-HP0C2I4 478 aaKnown RBP3.33□□□□□ -1.88
SPT4YGR063C TY1A-AP0CX57 440 aa3.33□□□□□ -1.88
SPT4YGR063C TY1A-PR1P0CX58 440 aa3.33□□□□□ -1.88
SPT4YGR063C TY1A-ORP0CX59 440 aa3.33□□□□□ -1.88
SPT4YGR063C TY1A-PR2P0CX60 440 aa3.33□□□□□ -1.88
SPT4YGR063C TY1A-DR5P0CX65 440 aa3.33□□□□□ -1.88
SPT4YGR063C TY1A-ER2P0CX66 440 aa3.33□□□□□ -1.88
SPT4YGR063C TY1A-GR3P0CX67 440 aa3.33□□□□□ -1.88
SPT4YGR063C TY1A-LR1P0CX68 440 aa3.33□□□□□ -1.88
SPT4YGR063C TY1A-MR2P0CX69 440 aa3.33□□□□□ -1.88
SPT4YGR063C NAM2P11325 894 aa3.33□□□□□ -1.88
SPT4YGR063C YPK1P12688 680 aaKnown RBP3.33□□□□□ -1.88
SPT4YGR063C CAF20P12962 161 aaKnown RBP3.33□□□□□ -1.88
SPT4YGR063C CKA1P15790 372 aa3.33□□□□□ -1.88
SPT4YGR063C COX11P19516 300 aaKnown RBP3.33□□□□□ -1.88
SPT4YGR063C RFA1P22336 621 aaKnown RBP3.33□□□□□ -1.88
SPT4YGR063C MIR1P23641 311 aaKnown RBP3.33□□□□□ -1.88
SPT4YGR063C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
SPT4YGR063C RHB1P25378 209 aa3.33□□□□□ -1.88
SPT4YGR063C YCL002CP25565 263 aa3.33□□□□□ -1.88
SPT4YGR063C URA10P30402 227 aa3.33□□□□□ -1.88
SPT4YGR063C PAH1P32567 862 aa3.33□□□□□ -1.88
SPT4YGR063C EMP24P32803 203 aaKnown RBP3.33□□□□□ -1.88
SPT4YGR063C MOT2P34909 587 aaKnown RBP3.33□□□□□ -1.88
SPT4YGR063C FRE2P36033 711 aa3.33□□□□□ -1.88
SPT4YGR063C DOA1P36037 715 aa3.33□□□□□ -1.88
SPT4YGR063C SOL2P37262 315 aa3.33□□□□□ -1.88
SPT4YGR063C FLR1P38124 548 aa3.33□□□□□ -1.88
SPT4YGR063C YBR013CP38215 129 aa3.33□□□□□ -1.88
SPT4YGR063C PPE1P38796 400 aa3.33□□□□□ -1.88
SPT4YGR063C UBA4P38820 440 aa3.33□□□□□ -1.88
SPT4YGR063C CRP1P38845 465 aaKnown RBP3.33□□□□□ -1.88
SPT4YGR063C SUR2P38992 349 aa3.33□□□□□ -1.88
SPT4YGR063C BUR6P40096 142 aa3.33□□□□□ -1.88
SPT4YGR063C LAS21P40367 830 aa3.33□□□□□ -1.88
SPT4YGR063C PKP1P40530 394 aa3.33□□□□□ -1.88
SPT4YGR063C PFA3P42836 336 aa3.33□□□□□ -1.88
SPT4YGR063C PRM10P42946 383 aa3.33□□□□□ -1.88
SPT4YGR063C NSE4P43124 402 aa3.33□□□□□ -1.88
SPT4YGR063C CAK1P43568 368 aaPredicted RBP3.33□□□□□ -1.88
SPT4YGR063C LOH1P47055 219 aa3.33□□□□□ -1.88
SPT4YGR063C TY1A-JR2P47099 440 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms