RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W BNI5P53890 448 aaKnown RBP0.83□□□□□ -2.28
BFR2YDR299W TPS1Q00764 495 aaKnown RBP0.83□□□□□ -2.28
BFR2YDR299W NUP116Q02630 1113 aa0.83□□□□□ -2.28
BFR2YDR299W SKI8Q02793 397 aaPredicted RBP0.83□□□□□ -2.28
BFR2YDR299W YPL107WQ02873 248 aa0.83□□□□□ -2.28
BFR2YDR299W YDR131CQ03899 556 aa0.83□□□□□ -2.28
BFR2YDR299W SMF3Q12078 473 aaPredicted RBP0.83□□□□□ -2.28
BFR2YDR299W YRM1Q12340 786 aa0.83□□□□□ -2.28
BFR2YDR299W IZH2Q12442 317 aa0.83□□□□□ -2.28
BFR2YDR299W FOL3Q12676 427 aaPredicted RBP0.83□□□□□ -2.28
BFR2YDR299W SMC6Q12749 1114 aa0.83□□□□□ -2.28
BFR2YDR299W TY1B-AO13527 1196 aaKnown RBP0.82□□□□□ -2.28
BFR2YDR299W HSP82P02829 709 aaKnown RBP0.82□□□□□ -2.28
BFR2YDR299W TPK3P05986 398 aa0.82□□□□□ -2.28
BFR2YDR299W CYC3P06182 269 aa0.82□□□□□ -2.28
BFR2YDR299W CBP6P07253 162 aaPredicted RBP0.82□□□□□ -2.28
BFR2YDR299W PRB1P09232 635 aa0.82□□□□□ -2.28
BFR2YDR299W IMA3P0CW40 589 aa0.82□□□□□ -2.28
BFR2YDR299W IMA4P0CW41 589 aa0.82□□□□□ -2.28
BFR2YDR299W ASP3-2P0CX77 362 aa0.82□□□□□ -2.28
BFR2YDR299W ASP3-3P0CX78 362 aa0.82□□□□□ -2.28
BFR2YDR299W ASP3-4P0CX79 362 aa0.82□□□□□ -2.28
BFR2YDR299W ASP3-1P0CZ17 362 aa0.82□□□□□ -2.28
BFR2YDR299W ALG1P16661 449 aa0.82□□□□□ -2.28
BFR2YDR299W RRP7P25368 297 aaPredicted RBP0.82□□□□□ -2.28
BFR2YDR299W CDC50P25656 391 aa0.82□□□□□ -2.28
BFR2YDR299W PHO91P27514 894 aa0.82□□□□□ -2.28
BFR2YDR299W ITR1P30605 584 aa0.82□□□□□ -2.28
BFR2YDR299W FUN26P31381 517 aa0.82□□□□□ -2.28
BFR2YDR299W PUP2P32379 260 aa0.82□□□□□ -2.28
BFR2YDR299W NRP1P32770 719 aaKnown RBP RIP-Chip data0.82□□□□□ -2.28not detected
BFR2YDR299W SKN1P33336 771 aa0.82□□□□□ -2.28
BFR2YDR299W YKL097CP34245 136 aa0.82□□□□□ -2.28
BFR2YDR299W YKR015CP36111 568 aa0.82□□□□□ -2.28
BFR2YDR299W SBE22P38814 852 aa0.82□□□□□ -2.28
BFR2YDR299W PEX22P39718 180 aa0.82□□□□□ -2.28
BFR2YDR299W ATM1P40416 690 aa0.82□□□□□ -2.28
BFR2YDR299W ZIM17P42844 174 aa0.82□□□□□ -2.28
BFR2YDR299W YJR085CP47131 105 aaKnown RBP0.82□□□□□ -2.28
BFR2YDR299W STE24P47154 453 aa0.82□□□□□ -2.28
BFR2YDR299W TRF5P48561 642 aaKnown RBP0.82□□□□□ -2.28
BFR2YDR299W OCA2P53949 197 aa0.82□□□□□ -2.28
BFR2YDR299W SPR6Q01684 191 aa0.82□□□□□ -2.28
BFR2YDR299W ERO1Q03103 563 aa0.82□□□□□ -2.28
BFR2YDR299W RCF1Q03713 159 aa0.82□□□□□ -2.28
BFR2YDR299W YLR456WQ06199 204 aa0.82□□□□□ -2.28
BFR2YDR299W MCH1Q07376 486 aa0.82□□□□□ -2.28
BFR2YDR299W YFH1Q07540 174 aa0.82□□□□□ -2.28
BFR2YDR299W IMA2Q08295 589 aa0.82□□□□□ -2.28
BFR2YDR299W YPQ1Q12010 308 aa0.82□□□□□ -2.28
BFR2YDR299W YOP1Q12402 180 aa0.82□□□□□ -2.28
BFR2YDR299W ISN1Q99312 450 aa0.82□□□□□ -2.28
BFR2YDR299W COX4P04037 155 aa0.82□□□□□ -2.28
BFR2YDR299W RPS8AP0CX39 200 aaKnown RBP0.82□□□□□ -2.28
BFR2YDR299W RPS8BP0CX40 200 aaKnown RBP0.82□□□□□ -2.28
BFR2YDR299W RPL12AP0CX53 165 aaKnown RBP0.82□□□□□ -2.28
BFR2YDR299W RPL12BP0CX54 165 aa0.82□□□□□ -2.28
BFR2YDR299W CAP2P13517 287 aa0.82□□□□□ -2.28
BFR2YDR299W ZRC1P20107 442 aa0.82□□□□□ -2.28
BFR2YDR299W EXG1P23776 448 aaKnown RBP0.82□□□□□ -2.28
BFR2YDR299W GIT1P25346 518 aa0.82□□□□□ -2.28
BFR2YDR299W VMA8P32610 256 aaKnown RBP0.82□□□□□ -2.28
BFR2YDR299W CSE2P33308 149 aa0.82□□□□□ -2.28
BFR2YDR299W MRPL10P36520 322 aa0.82□□□□□ -2.28
BFR2YDR299W SOL2P37262 315 aa0.82□□□□□ -2.28
BFR2YDR299W SHE3P38272 425 aaKnown RBP0.82□□□□□ -2.28
BFR2YDR299W YBR137WP38276 179 aa0.82□□□□□ -2.28
BFR2YDR299W EFM1P38732 585 aa0.82□□□□□ -2.28
BFR2YDR299W FAD1P38913 306 aa0.82□□□□□ -2.28
BFR2YDR299W MIG3P39943 394 aa0.82□□□□□ -2.28
BFR2YDR299W OXA1P39952 402 aa0.82□□□□□ -2.28
BFR2YDR299W SEC9P40357 651 aa0.82□□□□□ -2.28
BFR2YDR299W JEM1P40358 645 aa0.82□□□□□ -2.28
BFR2YDR299W ATG18P43601 500 aa0.82□□□□□ -2.28
BFR2YDR299W LCB3P47013 409 aa0.82□□□□□ -2.28
BFR2YDR299W PHB2P50085 310 aa0.82□□□□□ -2.28
BFR2YDR299W MLC1P53141 149 aa0.82□□□□□ -2.28
BFR2YDR299W IGO1P53897 168 aa0.82□□□□□ -2.28
BFR2YDR299W REX2P54964 269 aaKnown RBP0.82□□□□□ -2.28
BFR2YDR299W YET2Q04210 160 aa0.82□□□□□ -2.28
BFR2YDR299W URC2Q04411 772 aa0.82□□□□□ -2.28
BFR2YDR299W LIP2Q06005 328 aa0.82□□□□□ -2.28
BFR2YDR299W YPR091CQ06833 770 aa0.82□□□□□ -2.28
BFR2YDR299W DNL4Q08387 944 aaPredicted RBP0.82□□□□□ -2.28
BFR2YDR299W UAF30Q08747 228 aa0.82□□□□□ -2.28
BFR2YDR299W SPE3Q12074 293 aaKnown RBP0.82□□□□□ -2.28
BFR2YDR299W SFM1Q12314 213 aa0.82□□□□□ -2.28
BFR2YDR299W YBL111CQ3E7Y5 667 aa0.82□□□□□ -2.28
BFR2YDR299W NBL1Q3E7Y6 73 aa0.82□□□□□ -2.28
BFR2YDR299W NAG1Q8TGN9 163 aa0.82□□□□□ -2.28
BFR2YDR299W RNA1P11745 407 aaKnown RBP0.81□□□□□ -2.28
BFR2YDR299W MAS2P11914 482 aa0.81□□□□□ -2.28
BFR2YDR299W RPL16AP26784 199 aaKnown RBP0.81□□□□□ -2.28
BFR2YDR299W DPH5P32469 300 aaPredicted RBP0.81□□□□□ -2.28
BFR2YDR299W IES6P32617 166 aa0.81□□□□□ -2.28
BFR2YDR299W MDL1P33310 695 aa0.81□□□□□ -2.28
BFR2YDR299W SPO23P33757 523 aa0.81□□□□□ -2.28
BFR2YDR299W COS9P36034 407 aa0.81□□□□□ -2.28
BFR2YDR299W ANR2P36090 516 aaPredicted RBP0.81□□□□□ -2.28
BFR2YDR299W HEL1P36113 551 aa0.81□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms