RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W BUD9P53226 547 aa1.98□□□□□ -2.09
SIR4YDR227W YGR079WP53249 370 aa1.98□□□□□ -2.09
SIR4YDR227W RRN9P53437 365 aa1.98□□□□□ -2.09
SIR4YDR227W GIP3Q03016 1276 aa1.98□□□□□ -2.09
SIR4YDR227W VPS60Q03390 229 aa1.98□□□□□ -2.09
SIR4YDR227W TRS23Q03784 219 aa1.98□□□□□ -2.09
SIR4YDR227W FIN1Q03898 291 aa1.98□□□□□ -2.09
SIR4YDR227W BSP1Q06604 576 aa1.98□□□□□ -2.09
SIR4YDR227W YEH2Q07950 538 aa1.98□□□□□ -2.09
SIR4YDR227W SWM1Q12379 170 aa1.98□□□□□ -2.09
SIR4YDR227W YOR032W-AQ8TGS1 66 aa1.98□□□□□ -2.09
SIR4YDR227W SPE1P08432 466 aa1.98□□□□□ -2.09
SIR4YDR227W NAM2P11325 894 aa1.98□□□□□ -2.09
SIR4YDR227W TCP1P12612 559 aaKnown RBP1.98□□□□□ -2.09
SIR4YDR227W GAL3P13045 520 aa1.98□□□□□ -2.09
SIR4YDR227W CLN3P13365 580 aa1.98□□□□□ -2.09
SIR4YDR227W CAM1P29547 415 aaKnown RBP1.98□□□□□ -2.09
SIR4YDR227W UGP1P32861 499 aaKnown RBP1.98□□□□□ -2.09
SIR4YDR227W ECT1P33412 323 aa1.98□□□□□ -2.09
SIR4YDR227W TSC10P38342 320 aa1.98□□□□□ -2.09
SIR4YDR227W QNS1P38795 714 aaKnown RBP1.98□□□□□ -2.09
SIR4YDR227W UBA4P38820 440 aa1.98□□□□□ -2.09
SIR4YDR227W RCY1P39531 840 aa1.98□□□□□ -2.09
SIR4YDR227W RRG9P40156 214 aa1.98□□□□□ -2.09
SIR4YDR227W AGP3P43548 558 aa1.98□□□□□ -2.09
SIR4YDR227W AIM24P47127 394 aa1.98□□□□□ -2.09
SIR4YDR227W YGR066CP53242 292 aa1.98□□□□□ -2.09
SIR4YDR227W DIP5P53388 608 aa1.98□□□□□ -2.09
SIR4YDR227W DSL1P53847 754 aa1.98□□□□□ -2.09
SIR4YDR227W RPA49Q01080 415 aaPredicted RBP1.98□□□□□ -2.09
SIR4YDR227W GIS1Q03833 894 aa1.98□□□□□ -2.09
SIR4YDR227W ADH6Q04894 360 aaKnown RBP1.98□□□□□ -2.09
SIR4YDR227W GMC2Q06201 188 aa1.98□□□□□ -2.09
SIR4YDR227W YDL114WQ07530 308 aa1.98□□□□□ -2.09
SIR4YDR227W FMP40Q08968 688 aaPredicted RBP1.98□□□□□ -2.09
SIR4YDR227W YJR112W-AQ3E743 109 aa1.98□□□□□ -2.09
SIR4YDR227W PET20Q99373 253 aa1.98□□□□□ -2.09
SIR4YDR227W MRP10O75012 95 aa1.97□□□□□ -2.09
SIR4YDR227W COX1P00401 534 aa1.97□□□□□ -2.09
SIR4YDR227W MF(ALPHA)1P01149 165 aa1.97□□□□□ -2.09
SIR4YDR227W DST1P07273 309 aa1.97□□□□□ -2.09
SIR4YDR227W HSP30P25619 332 aa1.97□□□□□ -2.09
SIR4YDR227W URA7P28274 579 aaKnown RBP1.97□□□□□ -2.09
SIR4YDR227W YJU2P28320 278 aaPredicted RBP1.97□□□□□ -2.09
SIR4YDR227W LHS1P36016 881 aa1.97□□□□□ -2.09
SIR4YDR227W YBR056WP38081 501 aa1.97□□□□□ -2.09
SIR4YDR227W YNG2P38806 282 aaKnown RBP1.97□□□□□ -2.09
SIR4YDR227W RTT107P38850 1070 aa1.97□□□□□ -2.09
SIR4YDR227W YER079WP40052 210 aaKnown RBP1.97□□□□□ -2.09
SIR4YDR227W CTK2P46962 323 aa1.97□□□□□ -2.09
SIR4YDR227W CCC1P47818 322 aa1.97□□□□□ -2.09
SIR4YDR227W YNR071CP53757 342 aa1.97□□□□□ -2.09
SIR4YDR227W SWS2P53937 143 aa1.97□□□□□ -2.09
SIR4YDR227W CTR3Q06686 241 aa1.97□□□□□ -2.09
SIR4YDR227W AI5_ALPHAQ9ZZX1 630 aa1.97□□□□□ -2.09
SIR4YDR227W PET123P17558 318 aa1.97□□□□□ -2.09
SIR4YDR227W SPO7P18410 259 aa1.97□□□□□ -2.09
SIR4YDR227W SCL1P21243 252 aaKnown RBP1.97□□□□□ -2.09
SIR4YDR227W MCH2P36032 473 aa1.97□□□□□ -2.09
SIR4YDR227W CMC1P36064 111 aa1.97□□□□□ -2.09
SIR4YDR227W BMT2P38278 337 aa1.97□□□□□ -2.09
SIR4YDR227W VHC1P38329 1120 aa1.97□□□□□ -2.09
SIR4YDR227W RCK1P38622 512 aa1.97□□□□□ -2.09
SIR4YDR227W BIG1P38813 335 aa1.97□□□□□ -2.09
SIR4YDR227W SPC97P38863 823 aa1.97□□□□□ -2.09
SIR4YDR227W SSO2P39926 295 aa1.97□□□□□ -2.09
SIR4YDR227W PRK1P40494 810 aa1.97□□□□□ -2.09
SIR4YDR227W SSN8P47821 323 aa1.97□□□□□ -2.09
SIR4YDR227W COQ6P53318 479 aa1.97□□□□□ -2.09
SIR4YDR227W YKR011CQ02209 353 aa1.97□□□□□ -2.09
SIR4YDR227W ATP25Q03153 612 aa1.97□□□□□ -2.09
SIR4YDR227W MSC3Q05812 728 aa1.97□□□□□ -2.09
SIR4YDR227W HEM25Q07534 307 aa1.97□□□□□ -2.09
SIR4YDR227W SLF1Q12034 447 aaKnown RBP1.97□□□□□ -2.09
SIR4YDR227W MSL5Q12186 476 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
SIR4YDR227W YPT6Q99260 215 aa1.97□□□□□ -2.09
SIR4YDR227W CDC33P07260 213 aaKnown RBP1.97□□□□□ -2.09
SIR4YDR227W HTS1P07263 546 aaKnown RBP1.97□□□□□ -2.09
SIR4YDR227W SPS100P13130 326 aa1.97□□□□□ -2.09
SIR4YDR227W GIT1P25346 518 aa1.97□□□□□ -2.09
SIR4YDR227W CWP1P28319 239 aa1.97□□□□□ -2.09
SIR4YDR227W MEI4P29467 408 aa1.97□□□□□ -2.09
SIR4YDR227W CDC13P32797 924 aaKnown RBP1.97□□□□□ -2.09
SIR4YDR227W RPT5P33297 434 aaKnown RBP1.97□□□□□ -2.09
SIR4YDR227W NUP60P39705 539 aa1.97□□□□□ -2.09
SIR4YDR227W SDP1P40479 209 aa1.97□□□□□ -2.09
SIR4YDR227W DPB11P47027 764 aaPredicted RBP1.97□□□□□ -2.09
SIR4YDR227W VPS9P54787 451 aa1.97□□□□□ -2.09
SIR4YDR227W TRM82Q03774 444 aa1.97□□□□□ -2.09
SIR4YDR227W GEP5Q12393 293 aa1.97□□□□□ -2.09
SIR4YDR227W RGS2Q99188 309 aa1.97□□□□□ -2.09
SIR4YDR227W SPO11P23179 398 aa1.96□□□□□ -2.09
SIR4YDR227W VMA5P31412 392 aaKnown RBP1.96□□□□□ -2.09
SIR4YDR227W SFC1P33303 322 aa1.96□□□□□ -2.09
SIR4YDR227W PRP18P33411 251 aaPredicted RBP1.96□□□□□ -2.09
SIR4YDR227W UTH1P36135 365 aa1.96□□□□□ -2.09
SIR4YDR227W TSL1P38427 1098 aaKnown RBP1.96□□□□□ -2.09
SIR4YDR227W ANS1P38832 159 aa1.96□□□□□ -2.09
SIR4YDR227W MMM1P41800 426 aa1.96□□□□□ -2.09
SIR4YDR227W YJR030CP47101 745 aa1.96□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms