RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A HEM14P40012 539 aa-0.18□□□□□ -2.44
TFB5YDR079C-A HMF1P40037 129 aaKnown RBP-0.18□□□□□ -2.44
TFB5YDR079C-A YER084WP40057 128 aa-0.18□□□□□ -2.44
TFB5YDR079C-A DDI1P40087 428 aa-0.18□□□□□ -2.44
TFB5YDR079C-A BTT1P40314 149 aaPredicted RBP-0.18□□□□□ -2.44
TFB5YDR079C-A YIL161WP40449 235 aaKnown RBP-0.18□□□□□ -2.44
TFB5YDR079C-A AYR1P40471 297 aa-0.18□□□□□ -2.44
TFB5YDR079C-A AVT7P40501 490 aa-0.18□□□□□ -2.44
TFB5YDR079C-A SER33P40510 469 aa-0.18□□□□□ -2.44
TFB5YDR079C-A IMA5P40884 581 aa-0.18□□□□□ -2.44
TFB5YDR079C-A CUP9P41817 306 aa-0.18□□□□□ -2.44
TFB5YDR079C-A CAK1P43568 368 aaPredicted RBP-0.18□□□□□ -2.44
TFB5YDR079C-A RPA43P46669 326 aa-0.18□□□□□ -2.44
TFB5YDR079C-A BNA1P47096 177 aa-0.18□□□□□ -2.44
TFB5YDR079C-A YJR154WP47181 346 aa-0.18□□□□□ -2.44
TFB5YDR079C-A RAD17P48581 401 aa-0.18□□□□□ -2.44
TFB5YDR079C-A MPA43P53583 542 aaPredicted RBP-0.18□□□□□ -2.44
TFB5YDR079C-A MNT4P53745 580 aa-0.18□□□□□ -2.44
TFB5YDR079C-A ACT1P60010 375 aaKnown RBP-0.18□□□□□ -2.44
TFB5YDR079C-A CIK1Q01649 594 aa-0.18□□□□□ -2.44
TFB5YDR079C-A TOF2Q02208 771 aa-0.18□□□□□ -2.44
TFB5YDR079C-A ADA2Q02336 434 aa-0.18□□□□□ -2.44
TFB5YDR079C-A LCL1Q02786 101 aa-0.18□□□□□ -2.44
TFB5YDR079C-A YML037CQ03703 340 aa-0.18□□□□□ -2.44
TFB5YDR079C-A IVY1Q04934 453 aa-0.18□□□□□ -2.44
TFB5YDR079C-A YLR283WQ05867 314 aa-0.18□□□□□ -2.44
TFB5YDR079C-A SEC10Q06245 871 aa-0.18□□□□□ -2.44
TFB5YDR079C-A SHS1Q07657 551 aa-0.18□□□□□ -2.44
TFB5YDR079C-A YLL032CQ07834 825 aaKnown RBP RIP-Chip data-0.18□□□□□ -2.44not detected
TFB5YDR079C-A YLR030WQ07967 263 aa-0.18□□□□□ -2.44
TFB5YDR079C-A DIS3Q08162 1001 aaKnown RBP-0.18□□□□□ -2.44
TFB5YDR079C-A SDH5Q08230 162 aa-0.18□□□□□ -2.44
TFB5YDR079C-A HRT1Q08273 121 aa-0.18□□□□□ -2.44
TFB5YDR079C-A FYV12Q08559 129 aa-0.18□□□□□ -2.44
TFB5YDR079C-A CLP1Q08685 445 aaPredicted RBP-0.18□□□□□ -2.44
TFB5YDR079C-A DDC1Q08949 612 aa-0.18□□□□□ -2.44
TFB5YDR079C-A THP3Q12049 470 aaKnown RBP-0.18□□□□□ -2.44
TFB5YDR079C-A MDM32Q12171 622 aa-0.18□□□□□ -2.44
TFB5YDR079C-A TPO4Q12256 659 aa-0.18□□□□□ -2.44
TFB5YDR079C-A YLR108CQ12259 485 aa-0.18□□□□□ -2.44
TFB5YDR079C-A LDB17Q12342 491 aa-0.18□□□□□ -2.44
TFB5YDR079C-A JLP1Q12358 412 aa-0.18□□□□□ -2.44
TFB5YDR079C-A SFI1Q12369 946 aa-0.18□□□□□ -2.44
TFB5YDR079C-A ERP4Q12450 207 aa-0.18□□□□□ -2.44
TFB5YDR079C-A PCD1Q12524 340 aa-0.18□□□□□ -2.44
TFB5YDR079C-A NAG1Q8TGN9 163 aa-0.18□□□□□ -2.44
TFB5YDR079C-A YOR032W-AQ8TGS1 66 aa-0.18□□□□□ -2.44
TFB5YDR079C-A AFI1Q99222 893 aa-0.18□□□□□ -2.44
TFB5YDR079C-A ISN1Q99312 450 aa-0.18□□□□□ -2.44
TFB5YDR079C-A UBR2Q07963 1872 aa-0.18□□□□□ -2.44
TFB5YDR079C-A RIF1P29539 1916 aa-0.19□□□□□ -2.44
TFB5YDR079C-A DUR1,2P32528 1835 aaKnown RBP-0.19□□□□□ -2.44
TFB5YDR079C-A TY4B-JP47024 1803 aa-0.19□□□□□ -2.44
TFB5YDR079C-A STE2D6VTK4 431 aa-0.19□□□□□ -2.44
TFB5YDR079C-A SUC2P00724 532 aa-0.19□□□□□ -2.44
TFB5YDR079C-A LEU4P06208 619 aaKnown RBP-0.19□□□□□ -2.44
TFB5YDR079C-A CAR2P07991 424 aaKnown RBP-0.19□□□□□ -2.44
TFB5YDR079C-A MIS1P09440 975 aaKnown RBP-0.19□□□□□ -2.44
TFB5YDR079C-A TY2A-LR1P0C2J4 438 aa-0.19□□□□□ -2.44
TFB5YDR079C-A RPL2AP0CX45 254 aaKnown RBP-0.19□□□□□ -2.44
TFB5YDR079C-A RPL2BP0CX46 254 aaKnown RBP-0.19□□□□□ -2.44
TFB5YDR079C-A TY2A-FP0CX61 438 aa-0.19□□□□□ -2.44
TFB5YDR079C-A TY2A-GR2P0CX62 438 aa-0.19□□□□□ -2.44
TFB5YDR079C-A RED1P14291 827 aa-0.19□□□□□ -2.44
TFB5YDR079C-A KSS1P14681 368 aa-0.19□□□□□ -2.44
TFB5YDR079C-A APA1P16550 321 aaKnown RBP-0.19□□□□□ -2.44
TFB5YDR079C-A PHO81P17442 1178 aa-0.19□□□□□ -2.44
TFB5YDR079C-A CKI1P20485 582 aa-0.19□□□□□ -2.44
TFB5YDR079C-A UBC1P21734 215 aaKnown RBP-0.19□□□□□ -2.44
TFB5YDR079C-A CMK2P22517 447 aa-0.19□□□□□ -2.44
TFB5YDR079C-A PAP1P29468 568 aaKnown RBP-0.19□□□□□ -2.44
TFB5YDR079C-A ERG9P29704 444 aa-0.19□□□□□ -2.44
TFB5YDR079C-A ARP2P32381 391 aaKnown RBP-0.19□□□□□ -2.44
TFB5YDR079C-A GRX4P32642 244 aa-0.19□□□□□ -2.44
TFB5YDR079C-A FRE1P32791 686 aa-0.19□□□□□ -2.44
TFB5YDR079C-A RAD5P32849 1169 aaPredicted RBP-0.19□□□□□ -2.44
TFB5YDR079C-A CSE2P33308 149 aa-0.19□□□□□ -2.44
TFB5YDR079C-A MDL1P33310 695 aa-0.19□□□□□ -2.44
TFB5YDR079C-A TKL2P33315 681 aa-0.19□□□□□ -2.44
TFB5YDR079C-A CAB3P36076 571 aa-0.19□□□□□ -2.44
TFB5YDR079C-A NTR2P36118 322 aaPredicted RBP-0.19□□□□□ -2.44
TFB5YDR079C-A SRL3P36167 246 aa-0.19□□□□□ -2.44
TFB5YDR079C-A MRPL3P36516 390 aa-0.19□□□□□ -2.44
TFB5YDR079C-A NRG2P38082 220 aa-0.19□□□□□ -2.44
TFB5YDR079C-A CST26P38226 397 aa-0.19□□□□□ -2.44
TFB5YDR079C-A ATG12P38316 186 aa-0.19□□□□□ -2.44
TFB5YDR079C-A OM14P38325 134 aa-0.19□□□□□ -2.44
TFB5YDR079C-A CUE1P38428 203 aa-0.19□□□□□ -2.44
TFB5YDR079C-A RCK1P38622 512 aa-0.19□□□□□ -2.44
TFB5YDR079C-A WSS1P38838 269 aa-0.19□□□□□ -2.44
TFB5YDR079C-A SPL2P38839 148 aa-0.19□□□□□ -2.44
TFB5YDR079C-A SMC2P38989 1170 aaKnown RBP-0.19□□□□□ -2.44
TFB5YDR079C-A PES4P39684 611 aa-0.19□□□□□ -2.44
TFB5YDR079C-A YEL028WP39989 153 aa-0.19□□□□□ -2.44
TFB5YDR079C-A VPS27P40343 622 aaKnown RBP-0.19□□□□□ -2.44
TFB5YDR079C-A UTP18P40362 594 aaPredicted RBP-0.19□□□□□ -2.44
TFB5YDR079C-A VHS2P40463 436 aa-0.19□□□□□ -2.44
TFB5YDR079C-A YIL086CP40503 102 aa-0.19□□□□□ -2.44
TFB5YDR079C-A YIL029CP40538 142 aa-0.19□□□□□ -2.44
TFB5YDR079C-A IME4P41833 600 aa-0.19□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms