RNA–Protein interactions for RNA: YDR014W

RAD61, Transcript of Subunit of a complex that inhibits sister chromatid cohesion, yeast

Gene RAD61, Length 1,944 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD61	YDR014W	WSC4	P38739	605 aa		0.87	□□□□□ -2.27
RAD61	YDR014W	YDR115W	Q04598	105 aa		0.87	□□□□□ -2.27
RAD61	YDR014W	SNT309	Q06091	175 aa	Predicted RBP	0.87	□□□□□ -2.27
RAD61	YDR014W	LDB17	Q12342	491 aa		0.87	□□□□□ -2.27
RAD61	YDR014W	YOR338W	Q99326	363 aa		0.87	□□□□□ -2.27
RAD61	YDR014W	RPL3	P14126	387 aa	Known RBP	0.86	□□□□□ -2.27
RAD61	YDR014W	TOA1	P32773	286 aa		0.86	□□□□□ -2.27
RAD61	YDR014W	RRN10	P38204	145 aa		0.86	□□□□□ -2.27
RAD61	YDR014W	ATG12	P38316	186 aa		0.86	□□□□□ -2.27
RAD61	YDR014W	PRP38	Q00723	242 aa	Predicted RBP	0.86	□□□□□ -2.27
RAD61	YDR014W	STD1	Q02794	444 aa		0.86	□□□□□ -2.27
RAD61	YDR014W	YHC1	Q05900	231 aa	Known RBP	0.86	□□□□□ -2.27
RAD61	YDR014W	YLR177W	Q06251	628 aa		0.86	□□□□□ -2.27
RAD61	YDR014W	YPS1	P32329	569 aa		0.85	□□□□□ -2.27
RAD61	YDR014W	OTU2	P38747	307 aa	Known RBP	0.85	□□□□□ -2.27
RAD61	YDR014W	KEG1	P43614	200 aa		0.85	□□□□□ -2.27
RAD61	YDR014W	LDS2	Q08218	356 aa		0.85	□□□□□ -2.27
RAD61	YDR014W	YDR056C	Q12025	205 aa		0.85	□□□□□ -2.27
RAD61	YDR014W	IMA3	P0CW40	589 aa		0.85	□□□□□ -2.27
RAD61	YDR014W	IMA4	P0CW41	589 aa		0.85	□□□□□ -2.27
RAD61	YDR014W	CKA2	P19454	339 aa		0.85	□□□□□ -2.27
RAD61	YDR014W	SAG1	P20840	650 aa		0.85	□□□□□ -2.27
RAD61	YDR014W	PHO84	P25297	587 aa	Known RBP	0.85	□□□□□ -2.27
RAD61	YDR014W	NIP1	P32497	812 aa	Known RBP	0.85	□□□□□ -2.27
RAD61	YDR014W	COS5	P47187	383 aa		0.85	□□□□□ -2.27
RAD61	YDR014W	NBP1	P52919	319 aa	Predicted RBP	0.85	□□□□□ -2.27
RAD61	YDR014W	MNP1	P53163	194 aa	Predicted RBP	0.85	□□□□□ -2.27
RAD61	YDR014W	RRP46	P53256	223 aa	Predicted RBP	0.85	□□□□□ -2.27
RAD61	YDR014W	MMT1	Q03218	510 aa		0.85	□□□□□ -2.27
RAD61	YDR014W	VTI1	Q04338	217 aa		0.85	□□□□□ -2.27
RAD61	YDR014W	RRP45	Q05636	305 aa	Known RBP	0.85	□□□□□ -2.27
RAD61	YDR014W	COS7	Q07788	383 aa		0.85	□□□□□ -2.27
RAD61	YDR014W	IMA2	Q08295	589 aa		0.85	□□□□□ -2.27
RAD61	YDR014W	SRO7	Q12038	1033 aa		0.85	□□□□□ -2.27
RAD61	YDR014W	POM152	P39685	1337 aa		0.84	□□□□□ -2.27
RAD61	YDR014W	SKG6	P32900	734 aa	Predicted RBP	0.84	□□□□□ -2.27
RAD61	YDR014W	RRT13	P40042	185 aa		0.84	□□□□□ -2.27
RAD61	YDR014W	MSC3	Q05812	728 aa		0.84	□□□□□ -2.27
RAD61	YDR014W	COG4	Q06096	861 aa		0.84	□□□□□ -2.27
RAD61	YDR014W	TRX2	P22803	104 aa	Known RBP	0.83	□□□□□ -2.28
RAD61	YDR014W	DBP7	P36120	742 aa	Known RBP	0.83	□□□□□ -2.28
RAD61	YDR014W	ECM8	P38246	354 aa		0.83	□□□□□ -2.28
RAD61	YDR014W	SMF1	P38925	575 aa		0.83	□□□□□ -2.28
RAD61	YDR014W	BIO3	P50277	480 aa		0.83	□□□□□ -2.28
RAD61	YDR014W	VAC7	P53950	1165 aa		0.83	□□□□□ -2.28
RAD61	YDR014W	ASA1	Q06822	443 aa		0.83	□□□□□ -2.28
RAD61	YDR014W	GRX6	Q12438	231 aa		0.83	□□□□□ -2.28
RAD61	YDR014W	SSC1	P0CS90	654 aa	Known RBP	0.83	□□□□□ -2.28
RAD61	YDR014W	ALK2	P32789	676 aa	Predicted RBP	0.83	□□□□□ -2.28
RAD61	YDR014W	TKL2	P33315	681 aa		0.83	□□□□□ -2.28
RAD61	YDR014W	SKT5	P34226	696 aa		0.83	□□□□□ -2.28
RAD61	YDR014W	SHE3	P38272	425 aa	Known RBP	0.83	□□□□□ -2.28
RAD61	YDR014W	NTC20	P38302	140 aa	Predicted RBP	0.83	□□□□□ -2.28
RAD61	YDR014W	SFM1	Q12314	213 aa		0.83	□□□□□ -2.28
RAD61	YDR014W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
RAD61	YDR014W	ARG3	P05150	338 aa		0.82	□□□□□ -2.28
RAD61	YDR014W	RPS18A	P0CX55	146 aa	Known RBP	0.82	□□□□□ -2.28
RAD61	YDR014W	RPS18B	P0CX56	146 aa	Predicted RBP	0.82	□□□□□ -2.28
RAD61	YDR014W	CLC1	P17891	233 aa		0.82	□□□□□ -2.28
RAD61	YDR014W	DBF4	P32325	704 aa		0.82	□□□□□ -2.28
RAD61	YDR014W	RPA49	Q01080	415 aa	Predicted RBP	0.82	□□□□□ -2.28
RAD61	YDR014W	HIF1	Q12373	385 aa		0.82	□□□□□ -2.28
RAD61	YDR014W	ATP1	P07251	545 aa	Known RBP	0.81	□□□□□ -2.28
RAD61	YDR014W	RPS23A	P0CX29	145 aa	Known RBP	0.81	□□□□□ -2.28
RAD61	YDR014W	RPS23B	P0CX30	145 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	SNF6	P18888	332 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	DPB3	P27344	201 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	MKK1	P32490	508 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	SPS19	P32573	292 aa	Known RBP	0.81	□□□□□ -2.28
RAD61	YDR014W	SPO23	P33757	523 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	YGL138C	P53122	345 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	YGR117C	P53270	476 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	REX2	P54964	269 aa	Known RBP	0.81	□□□□□ -2.28
RAD61	YDR014W	RGM1	Q00453	211 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	SPR6	Q01684	191 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	HMS1	Q12398	434 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	PCL9	Q12477	304 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	ADE4	P04046	510 aa	Known RBP	0.81	□□□□□ -2.28
RAD61	YDR014W	ALG1	P16661	449 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	SRV2	P17555	526 aa	Known RBP	0.81	□□□□□ -2.28
RAD61	YDR014W	RAD23	P32628	398 aa	Known RBP	0.81	□□□□□ -2.28
RAD61	YDR014W	RNH201	P53942	307 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	RMI1	Q02685	241 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	YOR376W	Q08900	122 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	YAL067W-A	Q8TGK6	75 aa		0.81	□□□□□ -2.28
RAD61	YDR014W	YBR241C	P38142	488 aa		0.8	□□□□□ -2.28
RAD61	YDR014W	UFE1	P41834	346 aa		0.8	□□□□□ -2.28
RAD61	YDR014W	TRF5	P48561	642 aa	Known RBP	0.8	□□□□□ -2.28
RAD61	YDR014W	ASN2	P49090	572 aa	Known RBP	0.8	□□□□□ -2.28
RAD61	YDR014W	YMR155W	Q03795	547 aa		0.8	□□□□□ -2.28
RAD61	YDR014W	IMH1	Q06704	911 aa	Known RBP	0.8	□□□□□ -2.28
RAD61	YDR014W	RBG1	P39729	369 aa		0.79	□□□□□ -2.28
RAD61	YDR014W	ARF3	P40994	183 aa	RIP-Chip data	0.79	□□□□□ -2.28	not detected
RAD61	YDR014W	YGL088W	P53151	121 aa		0.79	□□□□□ -2.28
RAD61	YDR014W	SKO1	Q02100	647 aa		0.79	□□□□□ -2.28
RAD61	YDR014W	MIX17	Q03667	156 aa		0.79	□□□□□ -2.28
RAD61	YDR014W	DIS3	Q08162	1001 aa	Known RBP	0.79	□□□□□ -2.28
RAD61	YDR014W	LDS1	P31379	325 aa		0.79	□□□□□ -2.28
RAD61	YDR014W	ANP1	P32629	500 aa		0.79	□□□□□ -2.28
RAD61	YDR014W	UTP9	P38882	575 aa	Known RBP	0.79	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 208.5 ms