RNA–Protein interactions for RNA: YDL156W

CMR1, Transcript of DNA-binding protein with preference for UV-damaged DNA, yeast

Gene CMR1, Length 1,569 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR1	YDL156W	RPL35A	P0CX84	120 aa	Known RBP	5.82	□□□□□ -1.48
CMR1	YDL156W	RPL35B	P0CX85	120 aa	Known RBP	5.82	□□□□□ -1.48
CMR1	YDL156W	CLN3	P13365	580 aa		5.82	□□□□□ -1.48
CMR1	YDL156W	TYR1	P20049	452 aa		5.82	□□□□□ -1.48
CMR1	YDL156W	CKI1	P20485	582 aa		5.82	□□□□□ -1.48
CMR1	YDL156W	DPB2	P24482	689 aa	Predicted RBP	5.82	□□□□□ -1.48
CMR1	YDL156W	SLM5	P25345	492 aa	Known RBP	5.82	□□□□□ -1.48
CMR1	YDL156W	RAD24	P32641	659 aa		5.82	□□□□□ -1.48
CMR1	YDL156W	YKL162C	P36052	402 aa		5.82	□□□□□ -1.48
CMR1	YDL156W	PCL6	P40038	420 aa		5.82	□□□□□ -1.48
CMR1	YDL156W	LYS12	P40495	371 aa	Known RBP	5.82	□□□□□ -1.48
CMR1	YDL156W	PMT5	P52867	743 aa		5.82	□□□□□ -1.48
CMR1	YDL156W	LSG1	P53145	640 aa	Known RBP	5.82	□□□□□ -1.48
CMR1	YDL156W	TRM112	P53738	135 aa	Predicted RBP	5.82	□□□□□ -1.48
CMR1	YDL156W	TRS23	Q03784	219 aa		5.82	□□□□□ -1.48
CMR1	YDL156W	RVB1	Q03940	463 aa	Known RBP	5.82	□□□□□ -1.48
CMR1	YDL156W	DUS4	Q06063	367 aa		5.82	□□□□□ -1.48
CMR1	YDL156W	ABP140	Q08641	628 aa	Known RBP	5.82	□□□□□ -1.48
CMR1	YDL156W	DAP1	Q12091	152 aa		5.82	□□□□□ -1.48
CMR1	YDL156W	USV1	Q12132	391 aa		5.82	□□□□□ -1.48
CMR1	YDL156W	YLR108C	Q12259	485 aa		5.82	□□□□□ -1.48
CMR1	YDL156W	RRI1	Q12468	440 aa		5.82	□□□□□ -1.48
CMR1	YDL156W	MRP2	P10663	115 aa	Predicted RBP	5.81	□□□□□ -1.48
CMR1	YDL156W	VMA5	P31412	392 aa	Known RBP	5.81	□□□□□ -1.48
CMR1	YDL156W	SAC1	P32368	623 aa	Known RBP	5.81	□□□□□ -1.48
CMR1	YDL156W	MSN2	P33748	704 aa		5.81	□□□□□ -1.48
CMR1	YDL156W	CBP4	P37267	147 aa		5.81	□□□□□ -1.48
CMR1	YDL156W	FHL1	P39521	936 aa		5.81	□□□□□ -1.48
CMR1	YDL156W	ERG10	P41338	398 aa	Known RBP	5.81	□□□□□ -1.48
CMR1	YDL156W	PYK2	P52489	506 aa	Known RBP	5.81	□□□□□ -1.48
CMR1	YDL156W	SLI1	P53304	468 aa		5.81	□□□□□ -1.48
CMR1	YDL156W	ALG11	P53954	548 aa	Known RBP	5.81	□□□□□ -1.48
CMR1	YDL156W	YPL068C	Q02749	293 aa		5.81	□□□□□ -1.48
CMR1	YDL156W	SNU56	Q03782	492 aa	Known RBP	5.81	□□□□□ -1.48
CMR1	YDL156W	SMP3	Q04174	516 aa		5.81	□□□□□ -1.48
CMR1	YDL156W	BER1	Q06688	274 aa	Known RBP	5.81	□□□□□ -1.48
CMR1	YDL156W	IRC13	Q08630	104 aa		5.81	□□□□□ -1.48
CMR1	YDL156W	GAL4	P04386	881 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	CHO1	P08456	276 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	CBF1	P17106	351 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	RNR3	P21672	869 aa	Known RBP	5.8	□□□□□ -1.48
CMR1	YDL156W	CMK2	P22517	447 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	ERG9	P29704	444 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	HIS7	P33734	552 aa	Known RBP	5.8	□□□□□ -1.48
CMR1	YDL156W	SKT5	P34226	696 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	RTC3	P38804	111 aa	Predicted RBP	5.8	□□□□□ -1.48
CMR1	YDL156W	FMP52	P40008	231 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	SYG1	P40528	902 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	POP1	P41812	875 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	TMA22	P47089	198 aa	Predicted RBP	5.8	□□□□□ -1.48
CMR1	YDL156W	RIM8	P53179	542 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	NMA2	P53204	395 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	BIO4	P53630	237 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	EAF7	P53911	425 aa	Known RBP	5.8	□□□□□ -1.48
CMR1	YDL156W	GIP3	Q03016	1276 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	GFD1	Q04839	188 aa	Known RBP	5.8	□□□□□ -1.48
CMR1	YDL156W	CDC123	Q05791	360 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	DCR2	Q05924	578 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	ENB1	Q08299	606 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	OPI3	P05375	206 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	MRP1	P10662	321 aa	Known RBP	5.8	□□□□□ -1.48
CMR1	YDL156W	SNF6	P18888	332 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	RBK1	P25332	333 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	CBT1	P36038	271 aa	Predicted RBP	5.8	□□□□□ -1.48
CMR1	YDL156W	UBP8	P50102	471 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	DUG3	P53871	357 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	PFA5	Q03289	374 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	HRD3	Q05787	833 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	ATG26	Q06321	1198 aa		5.8	□□□□□ -1.48
CMR1	YDL156W	ACK1	Q07622	623 aa	Predicted RBP	5.8	□□□□□ -1.48
CMR1	YDL156W	SAM4	Q08985	325 aa	Known RBP	5.8	□□□□□ -1.48
CMR1	YDL156W	HIS4	P00815	799 aa	Known RBP	5.79	□□□□□ -1.48
CMR1	YDL156W	ATP1	P07251	545 aa	Known RBP	5.79	□□□□□ -1.48
CMR1	YDL156W	PPR1	P07272	904 aa	Predicted RBP	5.79	□□□□□ -1.48
CMR1	YDL156W	TRP4	P07285	380 aa	Predicted RBP	5.79	□□□□□ -1.48
CMR1	YDL156W	WHI2	P12611	486 aa		5.79	□□□□□ -1.48
CMR1	YDL156W	RPO26	P20435	155 aa		5.79	□□□□□ -1.48
CMR1	YDL156W	TKL1	P23254	680 aa	Known RBP	5.79	□□□□□ -1.48
CMR1	YDL156W	MXR2	P25566	168 aa		5.79	□□□□□ -1.48
CMR1	YDL156W	AST1	P35183	429 aa		5.79	□□□□□ -1.48
CMR1	YDL156W	YPT52	P36018	234 aa	Known RBP	5.79	□□□□□ -1.48
CMR1	YDL156W	YAL037W	P39728	267 aa		5.79	□□□□□ -1.48
CMR1	YDL156W	COA1	P40452	197 aa		5.79	□□□□□ -1.48
CMR1	YDL156W	YJL163C	P46996	555 aa		5.79	□□□□□ -1.48
CMR1	YDL156W	RPC17	P47076	161 aa		5.79	□□□□□ -1.48
CMR1	YDL156W	SPT20	P50875	604 aa		5.79	□□□□□ -1.48
CMR1	YDL156W	SLX9	P53251	210 aa	Predicted RBP	5.79	□□□□□ -1.48
CMR1	YDL156W	SNO2	P53823	222 aa		5.79	□□□□□ -1.48
CMR1	YDL156W	SNT309	Q06091	175 aa	Predicted RBP	5.79	□□□□□ -1.48
CMR1	YDL156W	ATG17	Q06410	417 aa		5.79	□□□□□ -1.48
CMR1	YDL156W	LDS2	Q08218	356 aa		5.79	□□□□□ -1.48
CMR1	YDL156W	SUT2	Q12286	268 aa		5.79	□□□□□ -1.48
CMR1	YDL156W	ATG34	Q12292	412 aa		5.79	□□□□□ -1.48
CMR1	YDL156W	RAD1	P06777	1100 aa		5.78	□□□□□ -1.48
CMR1	YDL156W	RAD52	P06778	471 aa	Known RBP	5.78	□□□□□ -1.48
CMR1	YDL156W	ARF1	P11076	181 aa	Known RBP	5.78	□□□□□ -1.48
CMR1	YDL156W	GAS1	P22146	559 aa	Known RBP	5.78	□□□□□ -1.48
CMR1	YDL156W	CLB2	P24869	491 aa		5.78	□□□□□ -1.48
CMR1	YDL156W	FUN19	P28003	413 aa	Predicted RBP	5.78	□□□□□ -1.48
CMR1	YDL156W	ZUO1	P32527	433 aa	Known RBP	5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms