RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeastyeast

Gene PBP4, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP4YDL053C SPR6Q01684 191 aa2.56□□□□□ -2
PBP4YDL053C LIP2Q06005 328 aa2.56□□□□□ -2
PBP4YDL053C LOT6Q07923 191 aa2.56□□□□□ -2
PBP4YDL053C SPE3Q12074 293 aaKnown RBP2.56□□□□□ -2
PBP4YDL053C YCR024C-BQ3E7Z8 88 aa2.56□□□□□ -2
PBP4YDL053C PAB1P04147 577 aaKnown RBP RIP-Chip data2.55□□□□□ -2 RIP-Chip
PBP4YDL053C OPI3P05375 206 aa2.55□□□□□ -2
PBP4YDL053C PIS1P06197 220 aaKnown RBP2.55□□□□□ -2
PBP4YDL053C SKT5P34226 696 aa2.55□□□□□ -2
PBP4YDL053C PXA2P34230 853 aa2.55□□□□□ -2
PBP4YDL053C MRP21P38175 177 aa2.55□□□□□ -2
PBP4YDL053C PMT5P52867 743 aa2.55□□□□□ -2
PBP4YDL053C ALF1P53904 254 aa2.55□□□□□ -2
PBP4YDL053C PRM6Q04705 352 aa2.55□□□□□ -2
PBP4YDL053C MFG1Q07684 458 aa2.55□□□□□ -2
PBP4YDL053C RPL12AP0CX53 165 aaKnown RBP2.54□□□□□ -2
PBP4YDL053C RPL12BP0CX54 165 aa2.54□□□□□ -2
PBP4YDL053C SLM5P25345 492 aaKnown RBP2.54□□□□□ -2
PBP4YDL053C YSC83P32792 385 aa2.54□□□□□ -2
PBP4YDL053C ANR2P36090 516 aaPredicted RBP2.54□□□□□ -2
PBP4YDL053C LCB2P40970 561 aa2.54□□□□□ -2
PBP4YDL053C CLD1P53264 445 aa2.54□□□□□ -2
PBP4YDL053C MEH1Q02205 184 aa2.54□□□□□ -2
PBP4YDL053C PRP3Q03338 469 aaPredicted RBP2.54□□□□□ -2
PBP4YDL053C YET2Q04210 160 aa2.54□□□□□ -2
PBP4YDL053C ECM7Q06200 448 aa2.54□□□□□ -2
PBP4YDL053C RPN5Q12250 445 aaKnown RBP2.54□□□□□ -2
PBP4YDL053C MCR1P36060 302 aaKnown RBP2.53□□□□□ -2
PBP4YDL053C GPX2P38143 162 aa2.53□□□□□ -2
PBP4YDL053C ATM1P40416 690 aa2.53□□□□□ -2
PBP4YDL053C EFM4P40516 257 aa2.53□□□□□ -2
PBP4YDL053C PAC11P40960 533 aa2.53□□□□□ -2
PBP4YDL053C RSC1P53236 928 aa2.53□□□□□ -2
PBP4YDL053C RRN9P53437 365 aa2.53□□□□□ -2
PBP4YDL053C URC2Q04411 772 aa2.53□□□□□ -2
PBP4YDL053C NDL1Q06568 189 aa2.53□□□□□ -2
PBP4YDL053C YPR091CQ06833 770 aa2.53□□□□□ -2
PBP4YDL053C YOP1Q12402 180 aa2.53□□□□□ -2
PBP4YDL053C NAG1Q8TGN9 163 aa2.53□□□□□ -2
PBP4YDL053C TPK3P05986 398 aa2.52□□□□□ -2.01
PBP4YDL053C RPL1AP0CX43 217 aaKnown RBP2.52□□□□□ -2.01
PBP4YDL053C RPL1BP0CX44 217 aaKnown RBP2.52□□□□□ -2.01
PBP4YDL053C CDC50P25656 391 aa2.52□□□□□ -2.01
PBP4YDL053C IES6P32617 166 aa2.52□□□□□ -2.01
PBP4YDL053C RAD5P32849 1169 aaPredicted RBP2.52□□□□□ -2.01
PBP4YDL053C OM14P38325 134 aa2.52□□□□□ -2.01
PBP4YDL053C YER186CP40101 306 aa2.52□□□□□ -2.01
PBP4YDL053C YNL208WP40159 199 aaKnown RBP2.52□□□□□ -2.01
PBP4YDL053C YJL055WP47044 245 aa2.52□□□□□ -2.01
PBP4YDL053C YDR541CQ03049 344 aa2.52□□□□□ -2.01
PBP4YDL053C ASA1Q06822 443 aa2.52□□□□□ -2.01
PBP4YDL053C COX4P04037 155 aa2.51□□□□□ -2.01
PBP4YDL053C ARF1P11076 181 aaKnown RBP2.51□□□□□ -2.01
PBP4YDL053C TOA2P32774 122 aa2.51□□□□□ -2.01
PBP4YDL053C DOA1P36037 715 aa2.51□□□□□ -2.01
PBP4YDL053C LRP1P38801 184 aaKnown RBP2.51□□□□□ -2.01
PBP4YDL053C TRM112P53738 135 aaPredicted RBP2.51□□□□□ -2.01
PBP4YDL053C SKI8Q02793 397 aaPredicted RBP2.51□□□□□ -2.01
PBP4YDL053C YDL114WQ07530 308 aa2.51□□□□□ -2.01
PBP4YDL053C FCY22Q12119 530 aa2.51□□□□□ -2.01
PBP4YDL053C ERP4Q12450 207 aa2.51□□□□□ -2.01
PBP4YDL053C HTZ1Q12692 134 aaKnown RBP2.51□□□□□ -2.01
PBP4YDL053C FUN26P31381 517 aa2.5□□□□□ -2.01
PBP4YDL053C TIR2P33890 251 aa2.5□□□□□ -2.01
PBP4YDL053C PFF1P38244 976 aa2.5□□□□□ -2.01
PBP4YDL053C GEP4P38812 185 aa2.5□□□□□ -2.01
PBP4YDL053C MNL1P38888 796 aa2.5□□□□□ -2.01
PBP4YDL053C MLH1P38920 769 aa2.5□□□□□ -2.01
PBP4YDL053C TIM17P39515 158 aa2.5□□□□□ -2.01
PBP4YDL053C ABM1P47146 123 aa2.5□□□□□ -2.01
PBP4YDL053C RTT102P53330 157 aa2.5□□□□□ -2.01
PBP4YDL053C VPS9P54787 451 aa2.5□□□□□ -2.01
PBP4YDL053C MRPS16Q02608 121 aa2.5□□□□□ -2.01
PBP4YDL053C NOP6Q07623 225 aaKnown RBP2.5□□□□□ -2.01
PBP4YDL053C DNL4Q08387 944 aaPredicted RBP2.5□□□□□ -2.01
PBP4YDL053C YDL012CQ12489 107 aa2.5□□□□□ -2.01
PBP4YDL053C PAR32Q12515 295 aaKnown RBP2.5□□□□□ -2.01
PBP4YDL053C PSK1P31374 1356 aa2.49□□□□□ -2.01
PBP4YDL053C MNE1P24720 663 aa2.49□□□□□ -2.01
PBP4YDL053C MID2P36027 376 aa2.49□□□□□ -2.01
PBP4YDL053C ECM8P38246 354 aa2.49□□□□□ -2.01
PBP4YDL053C PGU1P47180 361 aa2.49□□□□□ -2.01
PBP4YDL053C SXM1Q04175 944 aaKnown RBP2.49□□□□□ -2.01
PBP4YDL053C YDL199CQ12407 687 aa2.49□□□□□ -2.01
PBP4YDL053C PCL9Q12477 304 aa2.49□□□□□ -2.01
PBP4YDL053C PRB1P09232 635 aa2.48□□□□□ -2.01
PBP4YDL053C RNA1P11745 407 aaKnown RBP2.48□□□□□ -2.01
PBP4YDL053C ZRC1P20107 442 aa2.48□□□□□ -2.01
PBP4YDL053C SPO23P33757 523 aa2.48□□□□□ -2.01
PBP4YDL053C KAP104P38217 918 aaKnown RBP2.48□□□□□ -2.01
PBP4YDL053C PFS1P38872 237 aa2.48□□□□□ -2.01
PBP4YDL053C ALD5P40047 520 aaKnown RBP2.48□□□□□ -2.01
PBP4YDL053C ASN2P49090 572 aaKnown RBP2.48□□□□□ -2.01
PBP4YDL053C YIP5P53108 310 aa2.48□□□□□ -2.01
PBP4YDL053C LDS2Q08218 356 aa2.48□□□□□ -2.01
PBP4YDL053C AAD15Q08361 143 aa2.48□□□□□ -2.01
PBP4YDL053C FAB1P34756 2278 aa2.47□□□□□ -2.01
PBP4YDL053C SPP381P38282 291 aaPredicted RBP2.47□□□□□ -2.01
PBP4YDL053C YHR177WP38867 453 aa2.47□□□□□ -2.01
PBP4YDL053C SEO1P39709 593 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms