RNA–Protein interactions for RNA: YBR236C

ABD1, Transcript of Methyltransferase, yeast

Gene ABD1, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABD1	YBR236C	SWI3	P32591	825 aa		4.11	□□□□□ -1.75
ABD1	YBR236C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
ABD1	YBR236C	PFF1	P38244	976 aa		4.11	□□□□□ -1.75
ABD1	YBR236C	STP2	P38704	541 aa		4.11	□□□□□ -1.75
ABD1	YBR236C	YPI1	P43587	155 aa		4.11	□□□□□ -1.75
ABD1	YBR236C	YDR541C	Q03049	344 aa		4.11	□□□□□ -1.75
ABD1	YBR236C	SCW10	Q04951	389 aa		4.11	□□□□□ -1.75
ABD1	YBR236C	NSE1	Q07913	336 aa		4.11	□□□□□ -1.75
ABD1	YBR236C	NAM9	P27929	486 aa		4.1	□□□□□ -1.75
ABD1	YBR236C	ARO2	P28777	376 aa	Known RBP	4.1	□□□□□ -1.75
ABD1	YBR236C	SKN1	P33336	771 aa		4.1	□□□□□ -1.75
ABD1	YBR236C	CHK1	P38147	527 aa		4.1	□□□□□ -1.75
ABD1	YBR236C	QDR3	P38227	689 aa		4.1	□□□□□ -1.75
ABD1	YBR236C	RFS1	P38234	210 aa	Known RBP	4.1	□□□□□ -1.75
ABD1	YBR236C	JLP2	P40206	208 aa		4.1	□□□□□ -1.75
ABD1	YBR236C	CHS6	P40955	746 aa		4.1	□□□□□ -1.75
ABD1	YBR236C	CCE1	Q03702	353 aa		4.1	□□□□□ -1.75
ABD1	YBR236C	NDL1	Q06568	189 aa		4.1	□□□□□ -1.75
ABD1	YBR236C	NCA2	Q12374	616 aa		4.1	□□□□□ -1.75
ABD1	YBR236C	CEX1	Q12453	761 aa		4.1	□□□□□ -1.75
ABD1	YBR236C	HAP1	P0CE41	1502 aa		4.09	□□□□□ -1.75
ABD1	YBR236C	SLM5	P25345	492 aa	Known RBP	4.09	□□□□□ -1.75
ABD1	YBR236C	RRP1	P35178	278 aa	Predicted RBP	4.09	□□□□□ -1.75
ABD1	YBR236C	PAC11	P40960	533 aa		4.09	□□□□□ -1.75
ABD1	YBR236C	MEH1	Q02205	184 aa		4.09	□□□□□ -1.75
ABD1	YBR236C	NDE2	Q07500	545 aa		4.09	□□□□□ -1.75
ABD1	YBR236C	RAX1	Q08760	435 aa		4.09	□□□□□ -1.75
ABD1	YBR236C	YRM1	Q12340	786 aa		4.09	□□□□□ -1.75
ABD1	YBR236C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.08	□□□□□ -1.76
ABD1	YBR236C	YSC83	P32792	385 aa		4.08	□□□□□ -1.76
ABD1	YBR236C	COX13	P32799	129 aa		4.08	□□□□□ -1.76
ABD1	YBR236C	MNS1	P32906	549 aa		4.08	□□□□□ -1.76
ABD1	YBR236C	YKL097C	P34245	136 aa		4.08	□□□□□ -1.76
ABD1	YBR236C	APE4	P38821	490 aa		4.08	□□□□□ -1.76
ABD1	YBR236C	WSS1	P38838	269 aa		4.08	□□□□□ -1.76
ABD1	YBR236C	MLH1	P38920	769 aa		4.08	□□□□□ -1.76
ABD1	YBR236C	TOS3	P43637	560 aa		4.08	□□□□□ -1.76
ABD1	YBR236C	YGL242C	P53066	181 aa		4.08	□□□□□ -1.76
ABD1	YBR236C	MLC1	P53141	149 aa		4.08	□□□□□ -1.76
ABD1	YBR236C	MTM1	P53320	366 aa		4.08	□□□□□ -1.76
ABD1	YBR236C	CWC25	P53854	179 aa	Known RBP	4.08	□□□□□ -1.76
ABD1	YBR236C	YDR061W	Q12298	539 aa		4.08	□□□□□ -1.76
ABD1	YBR236C	IML1	P47170	1584 aa		4.07	□□□□□ -1.76
ABD1	YBR236C	SRB8	P25648	1427 aa		4.07	□□□□□ -1.76
ABD1	YBR236C	RPL6B	P05739	176 aa	Known RBP	4.07	□□□□□ -1.76
ABD1	YBR236C	CYC3	P06182	269 aa		4.07	□□□□□ -1.76
ABD1	YBR236C	ATP1	P07251	545 aa	Known RBP	4.07	□□□□□ -1.76
ABD1	YBR236C	DAL2	P25335	343 aa		4.07	□□□□□ -1.76
ABD1	YBR236C	KAP104	P38217	918 aa	Known RBP	4.07	□□□□□ -1.76
ABD1	YBR236C	MNL1	P38888	796 aa		4.07	□□□□□ -1.76
ABD1	YBR236C	SIM1	P40472	476 aa		4.07	□□□□□ -1.76
ABD1	YBR236C	REE1	P40893	198 aa		4.07	□□□□□ -1.76
ABD1	YBR236C	SPG5	P42933	373 aa		4.07	□□□□□ -1.76
ABD1	YBR236C	YGR210C	P42942	411 aa		4.07	□□□□□ -1.76
ABD1	YBR236C	EPL1	P43572	832 aa		4.07	□□□□□ -1.76
ABD1	YBR236C	EOS1	P53938	366 aa		4.07	□□□□□ -1.76
ABD1	YBR236C	RPL6A	Q02326	176 aa	Known RBP	4.07	□□□□□ -1.76
ABD1	YBR236C	HRI1	Q05905	244 aa	Known RBP	4.07	□□□□□ -1.76
ABD1	YBR236C	RSA1	Q08932	381 aa		4.07	□□□□□ -1.76
ABD1	YBR236C	VMR1	P38735	1592 aa		4.07	□□□□□ -1.76
ABD1	YBR236C	OPI3	P05375	206 aa		4.06	□□□□□ -1.76
ABD1	YBR236C	PET123	P17558	318 aa		4.06	□□□□□ -1.76
ABD1	YBR236C	DPH2	P32461	534 aa		4.06	□□□□□ -1.76
ABD1	YBR236C	COX14	P39103	70 aa		4.06	□□□□□ -1.76
ABD1	YBR236C	YIL029C	P40538	142 aa		4.06	□□□□□ -1.76
ABD1	YBR236C	ASN2	P49090	572 aa	Known RBP	4.06	□□□□□ -1.76
ABD1	YBR236C	YIP5	P53108	310 aa		4.06	□□□□□ -1.76
ABD1	YBR236C	NUP116	Q02630	1113 aa		4.06	□□□□□ -1.76
ABD1	YBR236C	MRPL35	Q06678	367 aa		4.06	□□□□□ -1.76
ABD1	YBR236C	TMS1	Q12116	473 aa		4.06	□□□□□ -1.76
ABD1	YBR236C	RNH203	Q12338	110 aa		4.06	□□□□□ -1.76
ABD1	YBR236C	YBT1	P32386	1661 aa		4.06	□□□□□ -1.76
ABD1	YBR236C	SUP35	P05453	685 aa	Known RBP	4.05	□□□□□ -1.76
ABD1	YBR236C	EXG1	P23776	448 aa	Known RBP	4.05	□□□□□ -1.76
ABD1	YBR236C	POP5	P28005	173 aa		4.05	□□□□□ -1.76
ABD1	YBR236C	MRPL4	P36517	319 aa		4.05	□□□□□ -1.76
ABD1	YBR236C	GDT1	P38301	280 aa	Predicted RBP	4.05	□□□□□ -1.76
ABD1	YBR236C	MSG5	P38590	489 aa		4.05	□□□□□ -1.76
ABD1	YBR236C	RRP46	P53256	223 aa	Predicted RBP	4.05	□□□□□ -1.76
ABD1	YBR236C	BTN2	P53286	410 aa		4.05	□□□□□ -1.76
ABD1	YBR236C	ECM7	Q06200	448 aa		4.05	□□□□□ -1.76
ABD1	YBR236C	FRE6	Q12473	712 aa		4.05	□□□□□ -1.76
ABD1	YBR236C	SRN2	Q99176	213 aa		4.05	□□□□□ -1.76
ABD1	YBR236C	RPS8A	P0CX39	200 aa	Known RBP	4.04	□□□□□ -1.76
ABD1	YBR236C	RPS8B	P0CX40	200 aa	Known RBP	4.04	□□□□□ -1.76
ABD1	YBR236C	NAM2	P11325	894 aa		4.04	□□□□□ -1.76
ABD1	YBR236C	NAT1	P12945	854 aa	Known RBP	4.04	□□□□□ -1.76
ABD1	YBR236C	CAP2	P13517	287 aa		4.04	□□□□□ -1.76
ABD1	YBR236C	MSP1	P28737	362 aa		4.04	□□□□□ -1.76
ABD1	YBR236C	KAR9	P32526	644 aa		4.04	□□□□□ -1.76
ABD1	YBR236C	SKT5	P34226	696 aa		4.04	□□□□□ -1.76
ABD1	YBR236C	DOA1	P36037	715 aa		4.04	□□□□□ -1.76
ABD1	YBR236C	SBE22	P38814	852 aa		4.04	□□□□□ -1.76
ABD1	YBR236C	ATM1	P40416	690 aa		4.04	□□□□□ -1.76
ABD1	YBR236C	PAN6	P40459	309 aa		4.04	□□□□□ -1.76
ABD1	YBR236C	SPR6	Q01684	191 aa		4.04	□□□□□ -1.76
ABD1	YBR236C	YPL107W	Q02873	248 aa		4.04	□□□□□ -1.76
ABD1	YBR236C	PRP3	Q03338	469 aa	Predicted RBP	4.04	□□□□□ -1.76
ABD1	YBR236C	URC2	Q04411	772 aa		4.04	□□□□□ -1.76
ABD1	YBR236C	IPK1	Q06667	281 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms