RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 GJB4Q9NTQ9 266 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 TMEM260Q9NX78 707 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 FLRT1Q9NZU1 646 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 ADD3Q9UEY8 706 aaKnown RBP7.31□□□□□ -1.24
VPS4B-205ENST00000591383 GJD2Q9UKL4 321 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 CNPY2Q9Y2B0 182 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 HCN4Q9Y3Q4 1203 aa7.31□□□□□ -1.24
VPS4B-205ENST00000591383 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.31□□□□□ -1.24
VPS4B-205ENST00000591383 DOCK5Q9H7D0 1870 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 ESYT2A0FGR8 921 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 VPS37CA5D8V6 355 aaPredicted RBP7.3□□□□□ -1.24
VPS4B-205ENST00000591383 WNT7AO00755 349 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 ADH1AP07327 375 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 MYCLP12524 364 aaPredicted RBP7.3□□□□□ -1.24
VPS4B-205ENST00000591383 XRCC5P13010 732 aaKnown RBP7.3□□□□□ -1.24
VPS4B-205ENST00000591383 MZF1P28698 734 aaPredicted RBP7.3□□□□□ -1.24
VPS4B-205ENST00000591383 CNGA1P29973 690 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 GNA11P29992 359 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 CCND2P30279 289 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 KRT2P35908 639 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 ANP32AP39687 249 aaKnown RBP7.3□□□□□ -1.24
VPS4B-205ENST00000591383 MRPL12P52815 198 aaKnown RBP7.3□□□□□ -1.24
VPS4B-205ENST00000591383 BECN1Q14457 450 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 ENOX2Q16206 610 aaKnown RBP7.3□□□□□ -1.24
VPS4B-205ENST00000591383 C11orf91Q3C1V1 193 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 OLFML2BQ68BL8 750 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 ZNF295-AS1Q8N0V1 137 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 NSUN6Q8TEA1 469 aaKnown RBP7.3□□□□□ -1.24
VPS4B-205ENST00000591383 SNX21Q969T3 373 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 EMID1Q96A84 441 aaPredicted RBP7.3□□□□□ -1.24
VPS4B-205ENST00000591383 LENG1Q96BZ8 264 aaPredicted RBP7.3□□□□□ -1.24
VPS4B-205ENST00000591383 MRGPRX2Q96LB1 330 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 TAAR1Q96RJ0 339 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 TINF2Q9BSI4 451 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 ANO3Q9BYT9 981 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 GLT8D2Q9H1C3 349 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 MYH15Q9Y2K3 1946 aa7.3□□□□□ -1.24
VPS4B-205ENST00000591383 SYNGAP1Q96PV0 1343 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 BRCA2P51587 3418 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 ASB14A6NK59 587 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 B4DLN1 442 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 H3BQV1 296 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 MEIS2O14770 477 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 ADAMTS3O15072 1205 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 SORBS3O60504 671 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 FDPSP14324 419 aaKnown RBP7.29□□□□□ -1.24
VPS4B-205ENST00000591383 CCND3P30281 292 aaPredicted RBP7.29□□□□□ -1.24
VPS4B-205ENST00000591383 GHRHRQ02643 423 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 CENPCQ03188 943 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 DNM1Q05193 864 aaKnown RBP7.29□□□□□ -1.24
VPS4B-205ENST00000591383 CACNB2Q08289 660 aaPredicted RBP7.29□□□□□ -1.24
VPS4B-205ENST00000591383 RAD51AP2Q09MP3 1159 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 PSMD2Q13200 908 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 CLN3Q13286 438 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 AP3B2Q13367 1082 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 SAFBQ15424 915 aaKnown RBP eCLIP7.29□□□□□ -1.24
VPS4B-205ENST00000591383 IFFO2Q5TF58 517 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 ANO1Q5XXA6 986 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 KRT40Q6A162 431 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 MCTP1Q6DN14 999 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 DIS3L2Q8IYB7 885 aaKnown RBP7.29□□□□□ -1.24
VPS4B-205ENST00000591383 BLIDQ8IZY5 108 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 DNERQ8NFT8 737 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 EDEM1Q92611 657 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 PDCD2LQ9BRP1 358 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 ZMYND12Q9H0C1 365 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.29□□□□□ -1.24
VPS4B-205ENST00000591383 SH3GLB2Q9NR46 395 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 PCDHA4Q9UN74 947 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 ZNF232Q9UNY5 417 aa7.29□□□□□ -1.24
VPS4B-205ENST00000591383 DIS3Q9Y2L1 958 aaKnown RBP7.29□□□□□ -1.24
VPS4B-205ENST00000591383 FRMPD4Q14CM0 1322 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 RPTORQ8N122 1335 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 CCDC194A0A1B0GVG4 234 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 MMP1P03956 469 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 PDGFAP04085 211 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 CYBAP13498 195 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 CCL5P13501 91 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 CBLBQ13191 982 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 CUL4AQ13619 759 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 PGM5Q15124 567 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 PRAMEF19Q5SWL8 479 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 SEPT14Q6ZU15 432 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 PIK3AP1Q6ZUJ8 805 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 KRT25Q7Z3Z0 450 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 MSL3Q8N5Y2 521 aaKnown RBP7.28□□□□□ -1.24
VPS4B-205ENST00000591383 SAMD3Q8N6K7 520 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 DAGLBQ8NCG7 672 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 TRPV1Q8NER1 839 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 PIK3R5Q8WYR1 880 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 ARMC5Q96C12 935 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 IFT43Q96FT9 208 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 ZNF333Q96JL9 665 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 PHF20Q9BVI0 1012 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 RNF208Q9H0X6 261 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 VTA1Q9NP79 307 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 KLK14Q9P0G3 267 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 PKD2L1Q9P0L9 805 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 VTI1BQ9UEU0 232 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 PCDHA6Q9UN73 950 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms