RNA–Protein interactions for RNA: ENST00000562299.1

LPCAT2-202, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 2

Gene LPCAT2, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-202ENST00000562299 CCDC66A2RUB6 948 aa5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 WNT9AO14904 365 aa5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 PLD2O14939 933 aa5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 RASGRP1O95267 797 aa5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 RAPGEF3O95398 923 aa5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 LTFP02788 710 aa5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 SARSP49591 514 aaKnown RBP5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 ITGA1P56199 1179 aa5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 PAN2Q504Q3 1202 aaKnown RBP5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 TRIM61Q5EBN2 209 aa5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 SP8Q8IXZ3 490 aa5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 GSTCDQ8NEC7 633 aa5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 POLR3GLQ9BT43 218 aa5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 CD244Q9BZW8 370 aa5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 PARD6AQ9NPB6 346 aa5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 ARID4BQ4LE39 1312 aaPredicted RBP5.7□□□□□ -1.5
LPCAT2-202ENST00000562299 CCDC144AA2RUR9 1427 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 ERBINQ96RT1 1412 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 SH3D21A4FU49 640 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 B8ZZF3 427 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 PRRG2O14669 202 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 TRIM13O60858 407 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 CYP7B1O75881 506 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 FAHP16930 419 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 SLURP1P55000 103 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 SQSTM1Q13501 440 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 VWA3BQ502W6 1294 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 HABP4Q5JVS0 413 aaKnown RBP5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 PRAMEF18Q5VWM3 479 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 BTBD8Q5XKL5 378 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 VASNQ6EMK4 673 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 TMC5Q6UXY8 1006 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 BRAPQ7Z569 592 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 PTRH1Q86Y79 214 aaKnown RBP5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 FAM9BQ8IZU0 186 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 CARFQ8N187 725 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 TTLL11Q8NHH1 800 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 TMEM209Q96SK2 561 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 CARD11Q9BXL7 1154 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 RIC8BQ9NVN3 520 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 SPATA6Q9NWH7 488 aaPredicted RBP5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 CROTQ9UKG9 612 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 CBLCQ9ULV8 474 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 ATP23Q9Y6H3 246 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 TRPM1Q7Z4N2 1603 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 PLA2R1Q13018 1463 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 MAGI2Q86UL8 1455 aa5.69□□□□□ -1.5
LPCAT2-202ENST00000562299 ROCK2O75116 1388 aaKnown RBP5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 TRAPPC8Q9Y2L5 1435 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 ESYT3A0FGR9 886 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 PPP1R12AO14974 1030 aaPredicted RBP5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 KCNQ2O43526 872 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 ASMTLO95671 621 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 ENO2P09104 434 aaPredicted RBP5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 INHBBP09529 407 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 THBS2P35442 1172 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 EPHA5P54756 1037 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 JAM2P57087 298 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 FNDC3BQ53EP0 1204 aaKnown RBP5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 EFCAB2Q5VUJ9 269 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 LIPIQ6XZB0 460 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 HOMER1Q86YM7 354 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 ZDHHC14Q8IZN3 488 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 TP53I13Q8NBR0 393 aaPredicted RBP5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 SCLYQ96I15 445 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 RNPC3Q96LT9 517 aaKnown RBP5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 SPATA25Q9BR10 227 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 KANSL2Q9H9L4 492 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 LUC7LQ9NQ29 371 aaKnown RBP5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 USP40Q9NVE5 1235 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 COQ6Q9Y2Z9 468 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 A2MP01023 1474 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 NCANO14594 1321 aa5.68□□□□□ -1.5
LPCAT2-202ENST00000562299 PRAG1Q86YV5 1406 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 E9PCH4 1651 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 TCRBV5S4A2TA0A5A2 114 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 TCRBV16S1A1N1A0A5B0 115 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 B4E1Z4 1266 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 RPL13P26373 211 aaKnown RBP5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 TCEA2Q15560 299 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 FGD2Q7Z6J4 655 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 DDX53Q86TM3 631 aaKnown RBP5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 SYNPOQ8N3V7 929 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 CISD2Q8N5K1 135 aaKnown RBP5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 SH3RF2Q8TEC5 729 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 APPBP2Q92624 585 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 ZSWIM3Q96MP5 696 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 KCNC2Q96PR1 638 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 WRNIP1Q96S55 665 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 TMEM260Q9NX78 707 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 HSPBP1Q9NZL4 362 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 SRPK3Q9UPE1 567 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 TELO2Q9Y4R8 837 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 ARAP3Q8WWN8 1544 aa5.67□□□□□ -1.5
LPCAT2-202ENST00000562299 LAMC1P11047 1609 aa5.66□□□□□ -1.5
LPCAT2-202ENST00000562299 ST20-MTHFSA0A0A6YYL1 179 aa5.66□□□□□ -1.5
LPCAT2-202ENST00000562299 DDX3XO00571 662 aaKnown RBP eCLIP5.66□□□□□ -1.5
LPCAT2-202ENST00000562299 KCNK3O14649 394 aa5.66□□□□□ -1.5
LPCAT2-202ENST00000562299 OPA1O60313 960 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms