RNA–Protein interactions for RNA: ENST00000562299.1

LPCAT2-202, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 2

Gene LPCAT2, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-202ENST00000562299 AEBP2Q6ZN18 517 aaPredicted RBP22.41■■□□□ 1.18
LPCAT2-202ENST00000562299 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
LPCAT2-202ENST00000562299 SENP3Q9H4L4 574 aaPredicted RBP19.18■□□□□ 0.66
LPCAT2-202ENST00000562299 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
LPCAT2-202ENST00000562299 FOXD1Q16676 465 aa17.91■□□□□ 0.46
LPCAT2-202ENST00000562299 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
LPCAT2-202ENST00000562299 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
LPCAT2-202ENST00000562299 MSH5O43196 834 aa16.86■□□□□ 0.29
LPCAT2-202ENST00000562299 PIAS4Q8N2W9 510 aaPredicted RBP16.73■□□□□ 0.27
LPCAT2-202ENST00000562299 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
LPCAT2-202ENST00000562299 ADRA2BP18089 450 aa16.53■□□□□ 0.24
LPCAT2-202ENST00000562299 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
LPCAT2-202ENST00000562299 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
LPCAT2-202ENST00000562299 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
LPCAT2-202ENST00000562299 PPP4R3CPQ6ZMV5 832 aa14.99□□□□□ -0.01
LPCAT2-202ENST00000562299 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
LPCAT2-202ENST00000562299 CACNB1Q02641 598 aaPredicted RBP14.7□□□□□ -0.06
LPCAT2-202ENST00000562299 NCBP3Q53F19 620 aaKnown RBP14.65□□□□□ -0.06
LPCAT2-202ENST00000562299 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.08
LPCAT2-202ENST00000562299 KCNA4P22459 653 aa14.57□□□□□ -0.08
LPCAT2-202ENST00000562299 HOXD11P31277 338 aaPredicted RBP14.47□□□□□ -0.09
LPCAT2-202ENST00000562299 NPM3O75607 178 aaKnown RBP14.34□□□□□ -0.11
LPCAT2-202ENST00000562299 RNF39Q9H2S5 420 aa14.34□□□□□ -0.11
LPCAT2-202ENST00000562299 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
LPCAT2-202ENST00000562299 C1QBPQ07021 282 aaKnown RBP14.13□□□□□ -0.15
LPCAT2-202ENST00000562299 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
LPCAT2-202ENST00000562299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.92□□□□□ -0.18
LPCAT2-202ENST00000562299 SLC4A1APQ9BWU0 796 aaKnown RBP13.91□□□□□ -0.18
LPCAT2-202ENST00000562299 SLC4A2P04920 1241 aa13.53□□□□□ -0.24
LPCAT2-202ENST00000562299 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
LPCAT2-202ENST00000562299 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
LPCAT2-202ENST00000562299 CAPN15O75808 1086 aa13.48□□□□□ -0.25
LPCAT2-202ENST00000562299 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
LPCAT2-202ENST00000562299 SPINK5Q9NQ38 1064 aaPredicted RBP13.42□□□□□ -0.26
LPCAT2-202ENST00000562299 DSG3P32926 999 aa13.36□□□□□ -0.27
LPCAT2-202ENST00000562299 ZBTB22O15209 634 aa13.35□□□□□ -0.27
LPCAT2-202ENST00000562299 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
LPCAT2-202ENST00000562299 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
LPCAT2-202ENST00000562299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
LPCAT2-202ENST00000562299 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
LPCAT2-202ENST00000562299 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
LPCAT2-202ENST00000562299 POTEHQ6S545 545 aa13.2□□□□□ -0.3
LPCAT2-202ENST00000562299 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
LPCAT2-202ENST00000562299 ABCB7O75027 752 aa13.14□□□□□ -0.31
LPCAT2-202ENST00000562299 APLP2Q06481 763 aa13.14□□□□□ -0.31
LPCAT2-202ENST00000562299 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
LPCAT2-202ENST00000562299 ATXN8OSP0DMR3 200 aa12.98□□□□□ -0.33
LPCAT2-202ENST00000562299 ATF5Q9Y2D1 282 aaPredicted RBP12.89□□□□□ -0.35
LPCAT2-202ENST00000562299 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
LPCAT2-202ENST00000562299 POLA2Q14181 598 aa12.76□□□□□ -0.37
LPCAT2-202ENST00000562299 CHRDL2Q6WN34 429 aa12.61□□□□□ -0.39
LPCAT2-202ENST00000562299 ZBTB12Q9Y330 459 aaPredicted RBP12.5□□□□□ -0.41
LPCAT2-202ENST00000562299 FBLN2P98095 1184 aa12.46□□□□□ -0.41
LPCAT2-202ENST00000562299 AKT1S1Q96B36 256 aa12.41□□□□□ -0.42
LPCAT2-202ENST00000562299 OSCARQ8IYS5 282 aa12.35□□□□□ -0.43
LPCAT2-202ENST00000562299 REM2Q8IYK8 340 aaPredicted RBP12.32□□□□□ -0.44
LPCAT2-202ENST00000562299 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
LPCAT2-202ENST00000562299 PIP4P2Q8N4L2 257 aa12.25□□□□□ -0.45
LPCAT2-202ENST00000562299 SP7Q8TDD2 431 aaPredicted RBP12.25□□□□□ -0.45
LPCAT2-202ENST00000562299 PITPNM1O00562 1244 aa12.19□□□□□ -0.46
LPCAT2-202ENST00000562299 HAX1O00165 279 aa12.17□□□□□ -0.46
LPCAT2-202ENST00000562299 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
LPCAT2-202ENST00000562299 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
LPCAT2-202ENST00000562299 SPDYE2Q495Y8 402 aa12.13□□□□□ -0.47
LPCAT2-202ENST00000562299 ZNF692Q9BU19 519 aaPredicted RBP12.12□□□□□ -0.47
LPCAT2-202ENST00000562299 SPDYE4A6NLX3 237 aa12.1□□□□□ -0.47
LPCAT2-202ENST00000562299 FXR2P51116 673 aaKnown RBP eCLIP12.1□□□□□ -0.47
LPCAT2-202ENST00000562299 FKBP8Q14318 412 aa12.07□□□□□ -0.48
LPCAT2-202ENST00000562299 CLEC11AQ9Y240 323 aa11.97□□□□□ -0.49
LPCAT2-202ENST00000562299 SSUH2Q9Y2M2 353 aa11.97□□□□□ -0.49
LPCAT2-202ENST00000562299 PABPN1Q86U42 306 aaKnown RBP eCLIP11.93□□□□□ -0.5
LPCAT2-202ENST00000562299 EVX2Q03828 476 aa11.92□□□□□ -0.5
LPCAT2-202ENST00000562299 PRKAR2AP13861 404 aaKnown RBP11.91□□□□□ -0.5
LPCAT2-202ENST00000562299 SPDYE1Q8NFV5 336 aaPredicted RBP11.9□□□□□ -0.5
LPCAT2-202ENST00000562299 PROM2Q8N271 834 aa11.78□□□□□ -0.52
LPCAT2-202ENST00000562299 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
LPCAT2-202ENST00000562299 C19orf67A6NJJ6 358 aa11.73□□□□□ -0.53
LPCAT2-202ENST00000562299 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
LPCAT2-202ENST00000562299 PRR29P0C7W0 189 aa11.71□□□□□ -0.53
LPCAT2-202ENST00000562299 FBXO3Q9UK99 471 aa11.69□□□□□ -0.54
LPCAT2-202ENST00000562299 GABBR2O75899 941 aa11.66□□□□□ -0.54
LPCAT2-202ENST00000562299 MIER1Q8N108 512 aa11.54□□□□□ -0.56
LPCAT2-202ENST00000562299 PLEKHG5O94827 1062 aa11.52□□□□□ -0.57
LPCAT2-202ENST00000562299 LHX8Q68G74 356 aa11.52□□□□□ -0.57
LPCAT2-202ENST00000562299 PLCD3Q8N3E9 789 aa11.52□□□□□ -0.57
LPCAT2-202ENST00000562299 CD44P16070 742 aaKnown RBP11.51□□□□□ -0.57
LPCAT2-202ENST00000562299 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
LPCAT2-202ENST00000562299 VASPP50552 380 aaPredicted RBP11.47□□□□□ -0.57
LPCAT2-202ENST00000562299 CREBZFQ9NS37 354 aa11.43□□□□□ -0.58
LPCAT2-202ENST00000562299 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
LPCAT2-202ENST00000562299 ZBTB47Q9UFB7 747 aaPredicted RBP11.38□□□□□ -0.59
LPCAT2-202ENST00000562299 POTEIP0CG38 1075 aa11.36□□□□□ -0.59
LPCAT2-202ENST00000562299 DCBLD2Q96PD2 775 aa11.35□□□□□ -0.59
LPCAT2-202ENST00000562299 NPM1P06748 294 aaKnown RBP eCLIP11.33□□□□□ -0.6
LPCAT2-202ENST00000562299 CLCN6P51797 869 aa11.33□□□□□ -0.6
LPCAT2-202ENST00000562299 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
LPCAT2-202ENST00000562299 IFNLR1Q8IU57 520 aaPredicted RBP11.3□□□□□ -0.6
LPCAT2-202ENST00000562299 MNX1P50219 401 aaPredicted RBP11.27□□□□□ -0.61
LPCAT2-202ENST00000562299 ZNF579Q8NAF0 562 aaKnown RBP11.25□□□□□ -0.61
LPCAT2-202ENST00000562299 SPOCK2Q92563 424 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms