RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 COG5Q9UP83 839 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 GRIN2DO15399 1336 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 LAMA4Q16363 1823 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 KIAA1217Q5T5P2 1943 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 SCN10AQ9Y5Y9 1956 aa8.43□□□□□ -1.06
BRCA1-214ENST00000477152 ERICH2A1L162 156 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 EIF3JO75822 258 aaKnown RBP8.42□□□□□ -1.06
BRCA1-214ENST00000477152 IQCF3P0C7M6 154 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 CYP2C9P11712 490 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 PTGISQ16647 500 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 C6orf118Q5T5N4 469 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 C16orf46Q6P387 395 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 SESTD1Q86VW0 696 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 C7orf31Q8N865 590 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 RUFY2Q8WXA3 655 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 ANKS1AQ92625 1134 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 SCLYQ96I15 445 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 CRBNQ96SW2 442 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 RMDN3Q96TC7 470 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 DSCC1Q9BVC3 393 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 LNPKQ9C0E8 428 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 WNT8AQ9H1J5 351 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 TRMT13Q9NUP7 481 aaKnown RBP8.42□□□□□ -1.06
BRCA1-214ENST00000477152 TANC1Q9C0D5 1861 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 SERTM1A2A2V5 107 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 TNFRSF10BO14763 440 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 FOXP2O15409 715 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 BMP1P13497 986 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 PHKA2P46019 1235 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 CHMP4BP1P59074 171 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 SART3Q15020 963 aaKnown RBP8.42□□□□□ -1.06
BRCA1-214ENST00000477152 CCDC85BQ15834 202 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-214ENST00000477152 IFIT1BQ5T764 474 aaKnown RBP8.42□□□□□ -1.06
BRCA1-214ENST00000477152 TMEM214Q6NUQ4 689 aaKnown RBP8.42□□□□□ -1.06
BRCA1-214ENST00000477152 SEPT14Q6ZU15 432 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 AMNQ9BXJ7 453 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 MRVI1Q9Y6F6 885 aa8.42□□□□□ -1.06
BRCA1-214ENST00000477152 DNAH12Q6ZR08 3092 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 MYO9BQ13459 2157 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 POU3F3P20264 500 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-214ENST00000477152 TXLNAP40222 546 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 CWC27Q6UX04 472 aaKnown RBP8.41□□□□□ -1.06
BRCA1-214ENST00000477152 ATCAYQ86WG3 371 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 CHD1LQ86WJ1 897 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 DHX37Q8IY37 1157 aaKnown RBP8.41□□□□□ -1.06
BRCA1-214ENST00000477152 ALDH16A1Q8IZ83 802 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 ADGRF4Q8IZF3 695 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 LINC00528Q8N1L1 170 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 MICALL1Q8N3F8 863 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 UHRF1Q96T88 793 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-214ENST00000477152 POLMQ9NP87 494 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-214ENST00000477152 LMCD1Q9NZU5 365 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 KLK14Q9P0G3 267 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 UMODL1Q5DID0 1318 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 MYH7BA7E2Y1 1941 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 ABHD14A-ACY1A0A1B0GW23 586 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 MMP3P08254 477 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 TGFB3P10600 412 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 SELPP16109 830 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 RABGGTBP53611 331 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 IKBKEQ14164 716 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 CNKSR3Q6P9H4 555 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 ZNF589Q86UQ0 364 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-214ENST00000477152 HERC6Q8IVU3 1022 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 SMC5Q8IY18 1101 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 ZKSCAN3Q9BRR0 538 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 C1QTNF1Q9BXJ1 281 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 UBA5Q9GZZ9 404 aa8.41□□□□□ -1.06
BRCA1-214ENST00000477152 YBX2Q9Y2T7 364 aaKnown RBP8.41□□□□□ -1.06
BRCA1-214ENST00000477152 EMSYQ7Z589 1322 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 PPFIA4O75335 1185 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 STAM2O75886 525 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 CFBP00751 764 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 GOLGA8HP0CJ92 632 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 GNAT1P11488 350 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 MAPK1P28482 360 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 TEAD4Q15561 434 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 GNPTABQ3T906 1256 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 LRRC8DQ7L1W4 858 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 STAG2Q8N3U4 1231 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 USP38Q8NB14 1042 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 PPTC7Q8NI37 304 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 SYTL5Q8TDW5 730 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-214ENST00000477152 AFG1LQ8WV93 481 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 GRIP2Q9C0E4 1043 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 VAT1LQ9HCJ6 419 aa8.4□□□□□ -1.06
BRCA1-214ENST00000477152 TRIP12Q14669 1992 aaPredicted RBP8.4□□□□□ -1.07
BRCA1-214ENST00000477152 CUL9Q8IWT3 2517 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 SCN5AQ14524 2016 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 NEDD4P46934 1319 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 ANKRD33BA6NCL7 494 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 FAM187AA6NFU0 413 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 B4E1Z4 1266 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 CA3P07451 260 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 CCND2P30279 289 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 NUCB1Q02818 461 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 QRICH1Q2TAL8 776 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 C4orf17Q53FE4 359 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 CCDC62Q6P9F0 684 aa8.39□□□□□ -1.07
BRCA1-214ENST00000477152 CHST3Q7LGC8 479 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms