RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 OAZ1P54368 228 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 TDRD12Q587J7 1177 aaKnown RBP17.76■□□□□ 0.43
SNX6-202ENST00000396526 TCERG1LQ5VWI1 586 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 EPM2AIP1Q7L775 607 aaPredicted RBP17.76■□□□□ 0.43
SNX6-202ENST00000396526 LSM14BQ9BX40 385 aaKnown RBP17.76■□□□□ 0.43
SNX6-202ENST00000396526 FGFBP2Q9BYJ0 223 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 RNF146Q9NTX7 359 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 VWA5AO00534 786 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 SLC16A3O15427 465 aaKnown RBP17.76■□□□□ 0.43
SNX6-202ENST00000396526 NR3C1P04150 777 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 MYBP10242 640 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 COG2Q14746 738 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 ODR4Q5SWX8 454 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 SFMBT2Q5VUG0 894 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 NLRX1Q86UT6 975 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 ZC3H3Q8IXZ2 948 aaKnown RBP17.76■□□□□ 0.43
SNX6-202ENST00000396526 GOLGA1Q92805 767 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 RSPH10B2B2RC85 870 aa17.75■□□□□ 0.43
SNX6-202ENST00000396526 AFPP02771 609 aaKnown RBP17.75■□□□□ 0.43
SNX6-202ENST00000396526 RSPH10BP0C881 870 aa17.75■□□□□ 0.43
SNX6-202ENST00000396526 KCNH2Q12809 1159 aa17.75■□□□□ 0.43
SNX6-202ENST00000396526 SYN2Q92777 582 aaPredicted RBP17.75■□□□□ 0.43
SNX6-202ENST00000396526 ASTN2O75129 1339 aaPredicted RBP17.75■□□□□ 0.43
SNX6-202ENST00000396526 FRMPD4Q14CM0 1322 aa17.75■□□□□ 0.43
SNX6-202ENST00000396526 RASSF10A6NK89 507 aa17.75■□□□□ 0.43
SNX6-202ENST00000396526 GUCY2CP25092 1073 aa17.75■□□□□ 0.43
SNX6-202ENST00000396526 QARSP47897 775 aaKnown RBP17.75■□□□□ 0.43
SNX6-202ENST00000396526 SYCP3Q8IZU3 236 aa17.75■□□□□ 0.43
SNX6-202ENST00000396526 GPC2Q8N158 579 aa17.75■□□□□ 0.43
SNX6-202ENST00000396526 ZKSCAN4Q969J2 545 aaPredicted RBP17.75■□□□□ 0.43
SNX6-202ENST00000396526 CCDC94Q9BW85 323 aaPredicted RBP17.75■□□□□ 0.43
SNX6-202ENST00000396526 HOXC10Q9NYD6 342 aa17.75■□□□□ 0.43
SNX6-202ENST00000396526 GPRC5DQ9NZD1 345 aa17.75■□□□□ 0.43
SNX6-202ENST00000396526 SFI1A8K8P3 1242 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 DKC1O60832 514 aaKnown RBP eCLIP17.74■□□□□ 0.43
SNX6-202ENST00000396526 SFNP31947 248 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 JAK3P52333 1124 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 ALCAMQ13740 583 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 BANK1Q8NDB2 785 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 ATG4CQ96DT6 458 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 TAAR1Q96RJ0 339 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 AGO4Q9HCK5 861 aaKnown RBP17.74■□□□□ 0.43
SNX6-202ENST00000396526 MAFGO15525 162 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 LMNB1P20700 586 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 ARHGAP25P42331 645 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 CASP5P51878 434 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 VAV2P52735 878 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 KRT76Q01546 638 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 GLIPR1L2Q4G1C9 344 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 MUM1L1Q5H9M0 696 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 PDXDC1Q6P996 788 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 C12orf42Q96LP6 360 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 GGA3Q9NZ52 723 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 COL20A1Q9P218 1284 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 FRMD4BQ9Y2L6 1034 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 LRRC53A6NM62 1247 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 TADA3O75528 432 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 CCND2P30279 289 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 PSMC2P35998 433 aaKnown RBP17.74■□□□□ 0.43
SNX6-202ENST00000396526 WHAMMP3Q1A5X7 153 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 IFIH1Q9BYX4 1025 aaKnown RBP17.74■□□□□ 0.43
SNX6-202ENST00000396526 NLRC4Q9NPP4 1024 aa17.74■□□□□ 0.43
SNX6-202ENST00000396526 SSU72P8A0A1W2PR75 194 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 TESPA1A2RU30 521 aaPredicted RBP17.73■□□□□ 0.43
SNX6-202ENST00000396526 HMGCS2P54868 508 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 POLR2FP61218 127 aaKnown RBP17.73■□□□□ 0.43
SNX6-202ENST00000396526 TEX35Q5T0J7 233 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 PADI6Q6TGC4 694 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 SPAG5Q96R06 1193 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 PDCD2LQ9BRP1 358 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 GBP3Q9H0R5 595 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 TACC1O75410 805 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 DCAF17Q5H9S7 520 aaPredicted RBP17.73■□□□□ 0.43
SNX6-202ENST00000396526 B3GNT9Q6UX72 402 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 SLC30A10Q6XR72 485 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 SRGAP1Q7Z6B7 1085 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 GPR161Q8N6U8 529 aaKnown RBP17.73■□□□□ 0.43
SNX6-202ENST00000396526 RBM46Q8TBY0 533 aaKnown RBP17.73■□□□□ 0.43
SNX6-202ENST00000396526 CDHR1Q96JP9 859 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 CRACR2AQ9BSW2 395 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 TIPINQ9BVW5 301 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 MAF1Q9H063 256 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 ZNF541Q9H0D2 1346 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 SMCHD1A6NHR9 2005 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 WDR64B1ANS9 1081 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 POTEB2H3BUK9 544 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 EIF4A3P38919 411 aaKnown RBP17.73■□□□□ 0.43
SNX6-202ENST00000396526 KIF11P52732 1056 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 PGM5Q15124 567 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 EXOC3L4Q17RC7 722 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 SNRNP48Q6IEG0 339 aaKnown RBP17.73■□□□□ 0.43
SNX6-202ENST00000396526 SGIP1Q9BQI5 828 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 MKNK1Q9BUB5 465 aa17.73■□□□□ 0.43
SNX6-202ENST00000396526 DBR1Q9UK59 544 aaKnown RBP17.73■□□□□ 0.43
SNX6-202ENST00000396526 SERPING1P05155 500 aa17.72■□□□□ 0.43
SNX6-202ENST00000396526 DSG3P32926 999 aa17.72■□□□□ 0.43
SNX6-202ENST00000396526 MAGEA1P43355 309 aa17.72■□□□□ 0.43
SNX6-202ENST00000396526 BAATQ14032 418 aaPredicted RBP17.72■□□□□ 0.43
SNX6-202ENST00000396526 GBP6Q6ZN66 633 aa17.72■□□□□ 0.43
SNX6-202ENST00000396526 SLC17A8Q8NDX2 589 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms