RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Anapc4Q91W96 807 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Scrn1Q9CZC8 414 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ascc1Q9D8Z1 356 aaKnown RBP11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Capn15Q9JLG8 1095 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 GgcxQ9QYC7 757 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 BcamQ9R069 622 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Tmod1P49813 359 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 AdkP55264 361 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Neurog2P70447 263 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Myo6Q64331 1265 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Trim47Q8C0E3 641 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Msantd4Q91YU3 345 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Rsrc1Q9DBU6 334 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Rcan1Q9JHG6 198 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 MefvQ9JJ26 767 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Tcp10bE9PYJ0 438 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Myo1eE9Q634 1107 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 E9QMW4 1145 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 TxkP42682 527 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Myo1fP70248 1099 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 HelqQ2VPA6 1069 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Stk38lQ7TSE6 464 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Llgl1Q80Y17 1036 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 P2ry10Q8BFU7 328 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Slc4a7Q8BTY2 1034 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Lsm14bQ8CGC4 385 aaKnown RBP11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Calr3Q9D9Q6 380 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 PycardQ9EPB4 193 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ankrd2Q9WV06 328 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Arap3Q8R5G7 1538 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Gm382B1AXN3 1250 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Cfap70D3YVL2 1141 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Klrk1O54709 232 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Casp8O89110 480 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Tex11Q14AT2 947 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Yipf3Q3UDR8 347 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Rnf207Q3V3A7 635 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Pnma5Q5DTT8 618 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Cnot7Q60809 285 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Nucks1Q80XU3 234 aaKnown RBP11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Dlg1Q811D0 905 aaKnown RBP11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Entpd5Q9WUZ9 427 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Zfp174B9EJW5 407 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Vmn2r78K7N6U5 853 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Sema4dO09126 861 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Prl2c3P04768 224 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Krt8P11679 490 aaKnown RBP11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Znrd1-asQ8R0E5 213 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Txnrd3Q99MD6 652 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Gfpt2Q9Z2Z9 682 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Nrg3O35181 713 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Folh1O35409 752 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Nmt1O70310 496 aaKnown RBP11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ripply1Q2WG77 201 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Cep70Q6IQY5 616 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Lca5Q80ST9 704 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Gpsm2Q8VDU0 679 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Oxnad1Q8VE38 311 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 SfpqQ8VIJ6 699 aaKnown RBP11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Psma8Q9CWH6 250 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Hyou1Q9JKR6 999 aaKnown RBP11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Krt71Q9R0H5 524 aa11.78□□□□□ -0.52
Msh3-201ENSMUST00000022220 Gm2030D3Z7C4 212 aa11.77□□□□□ -0.52
Msh3-201ENSMUST00000022220 L1camP11627 1260 aa11.77□□□□□ -0.52
Msh3-201ENSMUST00000022220 Eef1dP57776 281 aaKnown RBP11.77□□□□□ -0.52
Msh3-201ENSMUST00000022220 BC051142Q3V0M8 400 aa11.77□□□□□ -0.52
Msh3-201ENSMUST00000022220 Gja3Q64448 417 aa11.77□□□□□ -0.52
Msh3-201ENSMUST00000022220 KaznQ69ZS8 779 aa11.77□□□□□ -0.52
Msh3-201ENSMUST00000022220 Anks6Q6GQX6 883 aa11.77□□□□□ -0.52
Msh3-201ENSMUST00000022220 AtrnQ9WU60 1428 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Nova2D3YVV7 556 aaKnown RBP11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Krt19P19001 403 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Pde6bP23440 856 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Zfyve27Q3TXX3 415 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Trim80Q3V061 624 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Tbc1d1Q60949 1255 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Vps36Q91XD6 386 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Snx10Q9CWT3 201 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Riok3Q9DBU3 519 aaKnown RBP11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Nudt5Q9JKX6 218 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Trpc3Q9QZC1 836 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Mon2Q80TL7 1715 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 RpsaP14206 295 aaKnown RBP11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 GclcP97494 637 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Cep126Q0VBV7 1103 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Slc9a2Q3ZAS0 814 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Grm4Q68EF4 912 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Adgrg6Q6F3F9 1165 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 HgsQ99LI8 775 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Ddx47Q9CWX9 455 aaKnown RBP11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Spc24Q9D083 201 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Fam173bQ9D1Z3 247 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Slc40a1Q9JHI9 570 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Fem1bQ9Z2G0 627 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 Cntnap1O54991 1385 aa11.77□□□□□ -0.53
Msh3-201ENSMUST00000022220 IkbkbO88351 757 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 D630036H23RikQ3UQD6 204 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Lmtk3Q5XJV6 1424 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Cyfip1Q7TMB8 1253 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 MtrrQ8C1A3 696 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms