RNA–Protein interactions for RNA: snR80

snR80, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR80, Length 171 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR80	snR80	SGN1	P40561	250 aa	Known RBP RIP-Chip data	0.62	□□□□□ -2.31	not detected
snR80	snR80	MNN5	P46982	586 aa		0.62	□□□□□ -2.31
snR80	snR80	NGL3	Q03210	505 aa		0.62	□□□□□ -2.31
snR80	snR80	AUS1	Q08409	1394 aa		0.61	□□□□□ -2.31
snR80	snR80	SPS4	P09937	338 aa		0.61	□□□□□ -2.31
snR80	snR80	CMK2	P22517	447 aa		0.61	□□□□□ -2.31
snR80	snR80	DPH5	P32469	300 aa	Predicted RBP	0.61	□□□□□ -2.31
snR80	snR80	VEL1	P53058	206 aa		0.61	□□□□□ -2.31
snR80	snR80	GPI15	P53961	229 aa		0.61	□□□□□ -2.31
snR80	snR80	YMR155W	Q03795	547 aa		0.61	□□□□□ -2.31
snR80	snR80	YDL114W	Q07530	308 aa		0.61	□□□□□ -2.31
snR80	snR80	HTZ1	Q12692	134 aa	Known RBP	0.61	□□□□□ -2.31
snR80	snR80	EPT1	P22140	391 aa		0.6	□□□□□ -2.31
snR80	snR80	GIT1	P25346	518 aa		0.6	□□□□□ -2.31
snR80	snR80	CDD1	Q06549	142 aa		0.6	□□□□□ -2.31
snR80	snR80	FRE8	Q12209	686 aa		0.6	□□□□□ -2.31
snR80	snR80	ADH3	P07246	375 aa	Known RBP	0.59	□□□□□ -2.31
snR80	snR80	RIP1	P08067	215 aa		0.59	□□□□□ -2.31
snR80	snR80	SEC63	P14906	663 aa		0.59	□□□□□ -2.31
snR80	snR80	VHC1	P38329	1120 aa		0.59	□□□□□ -2.31
snR80	snR80	LSM12	P38828	187 aa	Known RBP	0.59	□□□□□ -2.31
snR80	snR80	YGL088W	P53151	121 aa		0.59	□□□□□ -2.31
snR80	snR80	DUO1	P53168	247 aa	Known RBP	0.59	□□□□□ -2.31
snR80	snR80	TWF1	P53250	332 aa		0.59	□□□□□ -2.31
snR80	snR80	TAF12	Q03761	539 aa		0.59	□□□□□ -2.31
snR80	snR80	RCN2	Q12044	265 aa		0.59	□□□□□ -2.31
snR80	snR80	SEC53	P07283	254 aa	Known RBP	0.58	□□□□□ -2.32
snR80	snR80	PDC2	P32896	925 aa		0.58	□□□□□ -2.32
snR80	snR80	SKG6	P32900	734 aa	Predicted RBP	0.58	□□□□□ -2.32
snR80	snR80	SEC66	P33754	206 aa		0.58	□□□□□ -2.32
snR80	snR80	SMP1	P38128	452 aa		0.58	□□□□□ -2.32
snR80	snR80	RFC3	P38629	340 aa		0.58	□□□□□ -2.32
snR80	snR80	YAL037W	P39728	267 aa		0.58	□□□□□ -2.32
snR80	snR80	ENT5	Q03769	411 aa	Known RBP	0.58	□□□□□ -2.32
snR80	snR80	CDC16	P09798	840 aa		0.57	□□□□□ -2.32
snR80	snR80	YBL081W	P38180	368 aa	Known RBP	0.57	□□□□□ -2.32
snR80	snR80	MEP3	P53390	489 aa		0.57	□□□□□ -2.32
snR80	snR80	KTR5	P53966	522 aa	Predicted RBP	0.57	□□□□□ -2.32
snR80	snR80	MIX17	Q03667	156 aa		0.57	□□□□□ -2.32
snR80	snR80	VMS1	Q04311	632 aa	Known RBP	0.57	□□□□□ -2.32
snR80	snR80	FOB1	O13329	566 aa		0.56	□□□□□ -2.32
snR80	snR80	RAD23	P32628	398 aa	Known RBP	0.56	□□□□□ -2.32
snR80	snR80	RBG1	P39729	369 aa		0.56	□□□□□ -2.32
snR80	snR80	VMA13	P41807	478 aa	Known RBP	0.56	□□□□□ -2.32
snR80	snR80	YJR008W	P47085	338 aa		0.56	□□□□□ -2.32
snR80	snR80	PHB2	P50085	310 aa		0.56	□□□□□ -2.32
snR80	snR80	GIP3	Q03016	1276 aa		0.56	□□□□□ -2.32
snR80	snR80	FCY22	Q12119	530 aa		0.56	□□□□□ -2.32
snR80	snR80	MIG1	P27705	504 aa		0.55	□□□□□ -2.32
snR80	snR80	FUN26	P31381	517 aa		0.55	□□□□□ -2.32
snR80	snR80	RAD5	P32849	1169 aa	Predicted RBP	0.55	□□□□□ -2.32
snR80	snR80	NOP4	P37838	685 aa	Known RBP	0.55	□□□□□ -2.32
snR80	snR80	ATP3	P38077	311 aa	Known RBP	0.55	□□□□□ -2.32
snR80	snR80	CST26	P38226	397 aa		0.55	□□□□□ -2.32
snR80	snR80	LYS14	P40971	790 aa		0.55	□□□□□ -2.32
snR80	snR80	SEH1	P53011	349 aa	Known RBP	0.55	□□□□□ -2.32
snR80	snR80	RPS23A	P0CX29	145 aa	Known RBP	0.54	□□□□□ -2.32
snR80	snR80	RPS23B	P0CX30	145 aa		0.54	□□□□□ -2.32
snR80	snR80	HOM3	P10869	527 aa		0.54	□□□□□ -2.32
snR80	snR80	EXG1	P23776	448 aa	Known RBP	0.54	□□□□□ -2.32
snR80	snR80	DBF4	P32325	704 aa		0.54	□□□□□ -2.32
snR80	snR80	MRS6	P32864	603 aa	Known RBP	0.54	□□□□□ -2.32
snR80	snR80	TOM20	P35180	183 aa		0.54	□□□□□ -2.32
snR80	snR80	YKR032W	P36127	104 aa		0.54	□□□□□ -2.32
snR80	snR80	SHE3	P38272	425 aa	Known RBP	0.54	□□□□□ -2.32
snR80	snR80	YDR115W	Q04598	105 aa		0.54	□□□□□ -2.32
snR80	snR80	HSP42	Q12329	375 aa		0.54	□□□□□ -2.32
snR80	snR80	CAP2	P13517	287 aa		0.53	□□□□□ -2.32
snR80	snR80	CBS1	P14066	229 aa		0.53	□□□□□ -2.32
snR80	snR80	SPS19	P32573	292 aa	Known RBP	0.53	□□□□□ -2.32
snR80	snR80	TOA1	P32773	286 aa		0.53	□□□□□ -2.32
snR80	snR80	CMC1	P36064	111 aa		0.53	□□□□□ -2.32
snR80	snR80	YBR056W	P38081	501 aa		0.53	□□□□□ -2.32
snR80	snR80	WSC4	P38739	605 aa		0.53	□□□□□ -2.32
snR80	snR80	ECM14	P38836	430 aa		0.53	□□□□□ -2.32
snR80	snR80	RRT13	P40042	185 aa		0.53	□□□□□ -2.32
snR80	snR80	VHS2	P40463	436 aa		0.53	□□□□□ -2.32
snR80	snR80	UFE1	P41834	346 aa		0.53	□□□□□ -2.32
snR80	snR80	ASA1	Q06822	443 aa		0.53	□□□□□ -2.32
snR80	snR80	SRO7	Q12038	1033 aa		0.53	□□□□□ -2.32
snR80	snR80	VPS54	Q12071	889 aa		0.53	□□□□□ -2.32
snR80	snR80	YDL199C	Q12407	687 aa		0.53	□□□□□ -2.32
snR80	snR80	MSP1	P28737	362 aa		0.52	□□□□□ -2.33
snR80	snR80	DBP7	P36120	742 aa	Known RBP	0.52	□□□□□ -2.33
snR80	snR80	APE3	P37302	537 aa	Known RBP	0.52	□□□□□ -2.33
snR80	snR80	RRP4	P38792	359 aa	Known RBP	0.52	□□□□□ -2.33
snR80	snR80	MET28	P40573	187 aa		0.52	□□□□□ -2.33
snR80	snR80	TRF5	P48561	642 aa	Known RBP	0.52	□□□□□ -2.33
snR80	snR80	HSH155	P49955	971 aa	Known RBP	0.52	□□□□□ -2.33
snR80	snR80	PRP38	Q00723	242 aa	Predicted RBP	0.52	□□□□□ -2.33
snR80	snR80	YLR177W	Q06251	628 aa		0.52	□□□□□ -2.33
snR80	snR80	RLP24	Q07915	199 aa	Known RBP	0.52	□□□□□ -2.33
snR80	snR80	ATG34	Q12292	412 aa		0.52	□□□□□ -2.33
snR80	snR80	HIF1	Q12373	385 aa		0.52	□□□□□ -2.33
snR80	snR80	HPR1	P17629	752 aa	Known RBP	0.51	□□□□□ -2.33
snR80	snR80	MMS4	P38257	691 aa		0.51	□□□□□ -2.33
snR80	snR80	BUG1	Q12191	341 aa		0.51	□□□□□ -2.33
snR80	snR80	HMS1	Q12398	434 aa		0.51	□□□□□ -2.33
snR80	snR80	HXT14	P42833	540 aa		0.5	□□□□□ -2.33
snR80	snR80	COS1	P53822	381 aa		0.5	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms