RNA–Protein interactions for RNA: snR8

snR8, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR8, Length 190 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR8	snR8	ASP3-3	P0CX78	362 aa		0.6	□□□□□ -2.31
snR8	snR8	ASP3-4	P0CX79	362 aa		0.6	□□□□□ -2.31
snR8	snR8	ASP3-1	P0CZ17	362 aa		0.6	□□□□□ -2.31
snR8	snR8	ALK2	P32789	676 aa	Predicted RBP	0.6	□□□□□ -2.31
snR8	snR8	VHC1	P38329	1120 aa		0.6	□□□□□ -2.31
snR8	snR8	ENT5	Q03769	411 aa	Known RBP	0.6	□□□□□ -2.31
snR8	snR8	LOT6	Q07923	191 aa		0.6	□□□□□ -2.31
snR8	snR8	LDS2	Q08218	356 aa		0.6	□□□□□ -2.31
snR8	snR8	PIS1	P06197	220 aa	Known RBP	0.59	□□□□□ -2.31
snR8	snR8	GPH1	P06738	902 aa	Known RBP	0.59	□□□□□ -2.31
snR8	snR8	SEC53	P07283	254 aa	Known RBP	0.59	□□□□□ -2.31
snR8	snR8	SPS4	P09937	338 aa		0.59	□□□□□ -2.31
snR8	snR8	MSP1	P28737	362 aa		0.59	□□□□□ -2.31
snR8	snR8	SOL2	P37262	315 aa		0.59	□□□□□ -2.31
snR8	snR8	YAL037W	P39728	267 aa		0.59	□□□□□ -2.31
snR8	snR8	VTC2	P43585	828 aa		0.59	□□□□□ -2.31
snR8	snR8	BAT2	P47176	376 aa	Known RBP	0.59	□□□□□ -2.31
snR8	snR8	BIO3	P50277	480 aa		0.59	□□□□□ -2.31
snR8	snR8	SEH1	P53011	349 aa	Known RBP	0.59	□□□□□ -2.31
snR8	snR8	ALF1	P53904	254 aa		0.59	□□□□□ -2.31
snR8	snR8	RCN2	Q12044	265 aa		0.59	□□□□□ -2.31
snR8	snR8	FOB1	O13329	566 aa		0.58	□□□□□ -2.32
snR8	snR8	CBS1	P14066	229 aa		0.58	□□□□□ -2.32
snR8	snR8	EXG1	P23776	448 aa	Known RBP	0.58	□□□□□ -2.32
snR8	snR8	CST26	P38226	397 aa		0.58	□□□□□ -2.32
snR8	snR8	DOT5	P40553	215 aa		0.58	□□□□□ -2.32
snR8	snR8	TWF1	P53250	332 aa		0.58	□□□□□ -2.32
snR8	snR8	COS1	P53822	381 aa		0.58	□□□□□ -2.32
snR8	snR8	GIR2	Q03768	265 aa	Predicted RBP	0.58	□□□□□ -2.32
snR8	snR8	VMS1	Q04311	632 aa	Known RBP	0.58	□□□□□ -2.32
snR8	snR8	RPS23A	P0CX29	145 aa	Known RBP	0.57	□□□□□ -2.32
snR8	snR8	RPS23B	P0CX30	145 aa		0.57	□□□□□ -2.32
snR8	snR8	MRS6	P32864	603 aa	Known RBP	0.57	□□□□□ -2.32
snR8	snR8	TKL2	P33315	681 aa		0.57	□□□□□ -2.32
snR8	snR8	SEC66	P33754	206 aa		0.57	□□□□□ -2.32
snR8	snR8	YBL081W	P38180	368 aa	Known RBP	0.57	□□□□□ -2.32
snR8	snR8	MRX6	P48564	524 aa		0.57	□□□□□ -2.32
snR8	snR8	CAP2	P13517	287 aa		0.56	□□□□□ -2.32
snR8	snR8	EPT1	P22140	391 aa		0.56	□□□□□ -2.32
snR8	snR8	GIT1	P25346	518 aa		0.56	□□□□□ -2.32
snR8	snR8	WSC4	P38739	605 aa		0.56	□□□□□ -2.32
snR8	snR8	YDR115W	Q04598	105 aa		0.56	□□□□□ -2.32
snR8	snR8	PRM6	Q04705	352 aa		0.56	□□□□□ -2.32
snR8	snR8	FRE8	Q12209	686 aa		0.56	□□□□□ -2.32
snR8	snR8	YML133C	Q03099	1374 aa		0.56	□□□□□ -2.32
snR8	snR8	YLL067C	Q07888	1374 aa		0.56	□□□□□ -2.32
snR8	snR8	YLL066C	Q99208	1374 aa		0.56	□□□□□ -2.32
snR8	snR8	DBF4	P32325	704 aa		0.55	□□□□□ -2.32
snR8	snR8	SKG6	P32900	734 aa	Predicted RBP	0.55	□□□□□ -2.32
snR8	snR8	IES5	P40060	125 aa		0.55	□□□□□ -2.32
snR8	snR8	VHS2	P40463	436 aa		0.55	□□□□□ -2.32
snR8	snR8	MET28	P40573	187 aa		0.55	□□□□□ -2.32
snR8	snR8	AIP1	P46680	615 aa	Known RBP	0.55	□□□□□ -2.32
snR8	snR8	GIP3	Q03016	1276 aa		0.55	□□□□□ -2.32
snR8	snR8	TAF12	Q03761	539 aa		0.55	□□□□□ -2.32
snR8	snR8	MDM30	Q05930	598 aa		0.55	□□□□□ -2.32
snR8	snR8	FCY22	Q12119	530 aa		0.55	□□□□□ -2.32
snR8	snR8	MCT1	Q12283	360 aa		0.55	□□□□□ -2.32
snR8	snR8	TOA1	P32773	286 aa		0.54	□□□□□ -2.32
snR8	snR8	SKT5	P34226	696 aa		0.54	□□□□□ -2.32
snR8	snR8	DBP7	P36120	742 aa	Known RBP	0.54	□□□□□ -2.32
snR8	snR8	APE3	P37302	537 aa	Known RBP	0.54	□□□□□ -2.32
snR8	snR8	RRT13	P40042	185 aa		0.54	□□□□□ -2.32
snR8	snR8	YDL114W	Q07530	308 aa		0.54	□□□□□ -2.32
snR8	snR8	YDL199C	Q12407	687 aa		0.54	□□□□□ -2.32
snR8	snR8	YGL088W	P53151	121 aa		0.53	□□□□□ -2.32
snR8	snR8	VTI1	Q04338	217 aa		0.53	□□□□□ -2.32
snR8	snR8	YLR177W	Q06251	628 aa		0.53	□□□□□ -2.32
snR8	snR8	SRO7	Q12038	1033 aa		0.53	□□□□□ -2.32
snR8	snR8	YCR024C-B	Q3E7Z8	88 aa		0.53	□□□□□ -2.32
snR8	snR8	CKA2	P19454	339 aa		0.52	□□□□□ -2.33
snR8	snR8	MIG1	P27705	504 aa		0.52	□□□□□ -2.33
snR8	snR8	FUN26	P31381	517 aa		0.52	□□□□□ -2.33
snR8	snR8	PMT1	P33775	817 aa		0.52	□□□□□ -2.33
snR8	snR8	CMC1	P36064	111 aa		0.52	□□□□□ -2.33
snR8	snR8	MNN5	P46982	586 aa		0.52	□□□□□ -2.33
snR8	snR8	YML131W	Q03102	365 aa		0.52	□□□□□ -2.33
snR8	snR8	YHC1	Q05900	231 aa	Known RBP	0.52	□□□□□ -2.33
snR8	snR8	CDD1	Q06549	142 aa		0.52	□□□□□ -2.33
snR8	snR8	ASA1	Q06822	443 aa		0.52	□□□□□ -2.33
snR8	snR8	SOR1	P35497	357 aa	Known RBP	0.51	□□□□□ -2.33
snR8	snR8	YBR056W	P38081	501 aa		0.51	□□□□□ -2.33
snR8	snR8	HXT14	P42833	540 aa		0.51	□□□□□ -2.33
snR8	snR8	PRP38	Q00723	242 aa	Predicted RBP	0.51	□□□□□ -2.33
snR8	snR8	SOR2	Q07786	357 aa		0.51	□□□□□ -2.33
snR8	snR8	YOR376W	Q08900	122 aa		0.51	□□□□□ -2.33
snR8	snR8	HTZ1	Q12692	134 aa	Known RBP	0.51	□□□□□ -2.33
snR8	snR8	RHB1	P25378	209 aa		0.5	□□□□□ -2.33
snR8	snR8	MUD2	P36084	527 aa	Known RBP	0.5	□□□□□ -2.33
snR8	snR8	RRP4	P38792	359 aa	Known RBP	0.5	□□□□□ -2.33
snR8	snR8	LSM12	P38828	187 aa	Known RBP	0.5	□□□□□ -2.33
snR8	snR8	YEL057C	P39983	233 aa		0.5	□□□□□ -2.33
snR8	snR8	RPS0B	P46654	252 aa	Known RBP	0.5	□□□□□ -2.33
snR8	snR8	LDB17	Q12342	491 aa		0.5	□□□□□ -2.33
snR8	snR8	PPH22	P23595	377 aa		0.49	□□□□□ -2.33
snR8	snR8	KEG1	P43614	200 aa		0.49	□□□□□ -2.33
snR8	snR8	TRF5	P48561	642 aa	Known RBP	0.49	□□□□□ -2.33
snR8	snR8	MEP3	P53390	489 aa		0.49	□□□□□ -2.33
snR8	snR8	ATG29	Q12092	213 aa		0.49	□□□□□ -2.33
snR8	snR8	ATG34	Q12292	412 aa		0.49	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms