RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR49, Length 165 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR49	snR49	MDM30	Q05930	598 aa		0.76	□□□□□ -2.29
snR49	snR49	YLR345W	Q06137	509 aa		0.76	□□□□□ -2.29
snR49	snR49	MET8	P15807	274 aa		0.75	□□□□□ -2.29
snR49	snR49	EXG1	P23776	448 aa	Known RBP	0.75	□□□□□ -2.29
snR49	snR49	YPS1	P32329	569 aa		0.75	□□□□□ -2.29
snR49	snR49	PPQ1	P32945	549 aa		0.75	□□□□□ -2.29
snR49	snR49	SMP1	P38128	452 aa		0.75	□□□□□ -2.29
snR49	snR49	HXT14	P42833	540 aa		0.75	□□□□□ -2.29
snR49	snR49	COS4	P43542	379 aa		0.75	□□□□□ -2.29
snR49	snR49	TAF12	Q03761	539 aa		0.75	□□□□□ -2.29
snR49	snR49	PIS1	P06197	220 aa	Known RBP	0.74	□□□□□ -2.29
snR49	snR49	STE7	P06784	515 aa		0.74	□□□□□ -2.29
snR49	snR49	CAP2	P13517	287 aa		0.74	□□□□□ -2.29
snR49	snR49	SAG1	P20840	650 aa		0.74	□□□□□ -2.29
snR49	snR49	PPH22	P23595	377 aa		0.74	□□□□□ -2.29
snR49	snR49	MSP1	P28737	362 aa		0.74	□□□□□ -2.29
snR49	snR49	FRM2	P37261	193 aa		0.74	□□□□□ -2.29
snR49	snR49	SDH4	P37298	181 aa		0.74	□□□□□ -2.29
snR49	snR49	APE3	P37302	537 aa	Known RBP	0.74	□□□□□ -2.29
snR49	snR49	NOP4	P37838	685 aa	Known RBP	0.74	□□□□□ -2.29
snR49	snR49	SEH1	P53011	349 aa	Known RBP	0.74	□□□□□ -2.29
snR49	snR49	VPS75	P53853	264 aa		0.74	□□□□□ -2.29
snR49	snR49	GIP3	Q03016	1276 aa		0.74	□□□□□ -2.29
snR49	snR49	YMR018W	Q04364	514 aa		0.74	□□□□□ -2.29
snR49	snR49	OPY2	Q06810	360 aa		0.74	□□□□□ -2.29
snR49	snR49	LOT6	Q07923	191 aa		0.74	□□□□□ -2.29
snR49	snR49	ATG29	Q12092	213 aa		0.74	□□□□□ -2.29
snR49	snR49	SEM1	O94742	89 aa		0.73	□□□□□ -2.29
snR49	snR49	FUS3	P16892	353 aa	Known RBP	0.73	□□□□□ -2.29
snR49	snR49	ZIP1	P31111	875 aa		0.73	□□□□□ -2.29
snR49	snR49	SOR1	P35497	357 aa	Known RBP	0.73	□□□□□ -2.29
snR49	snR49	ECM34	P38728	170 aa		0.73	□□□□□ -2.29
snR49	snR49	RPS0B	P46654	252 aa	Known RBP	0.73	□□□□□ -2.29
snR49	snR49	NBP1	P52919	319 aa	Predicted RBP	0.73	□□□□□ -2.29
snR49	snR49	VEL1	P53058	206 aa		0.73	□□□□□ -2.29
snR49	snR49	ENT5	Q03769	411 aa	Known RBP	0.73	□□□□□ -2.29
snR49	snR49	SOR2	Q07786	357 aa		0.73	□□□□□ -2.29
snR49	snR49	ASP3-2	P0CX77	362 aa		0.72	□□□□□ -2.29
snR49	snR49	ASP3-3	P0CX78	362 aa		0.72	□□□□□ -2.29
snR49	snR49	ASP3-4	P0CX79	362 aa		0.72	□□□□□ -2.29
snR49	snR49	ASP3-1	P0CZ17	362 aa		0.72	□□□□□ -2.29
snR49	snR49	DAL5	P15365	543 aa		0.72	□□□□□ -2.29
snR49	snR49	GIT1	P25346	518 aa		0.72	□□□□□ -2.29
snR49	snR49	RHB1	P25378	209 aa		0.72	□□□□□ -2.29
snR49	snR49	SOL2	P37262	315 aa		0.72	□□□□□ -2.29
snR49	snR49	YIL059C	P40520	121 aa		0.72	□□□□□ -2.29
snR49	snR49	ALF1	P53904	254 aa		0.72	□□□□□ -2.29
snR49	snR49	INP2	Q03824	705 aa		0.72	□□□□□ -2.29
snR49	snR49	DDC1	Q08949	612 aa		0.72	□□□□□ -2.29
snR49	snR49	FCY22	Q12119	530 aa		0.72	□□□□□ -2.29
snR49	snR49	MCT1	Q12283	360 aa		0.72	□□□□□ -2.29
snR49	snR49	AUS1	Q08409	1394 aa		0.71	□□□□□ -2.3
snR49	snR49	GEX1	P25596	615 aa		0.71	□□□□□ -2.3
snR49	snR49	KRE2	P27809	442 aa		0.71	□□□□□ -2.3
snR49	snR49	ATG12	P38316	186 aa		0.71	□□□□□ -2.3
snR49	snR49	WSC4	P38739	605 aa		0.71	□□□□□ -2.3
snR49	snR49	RRP4	P38792	359 aa	Known RBP	0.71	□□□□□ -2.3
snR49	snR49	PHO86	P46956	311 aa		0.71	□□□□□ -2.3
snR49	snR49	VMS1	Q04311	632 aa	Known RBP	0.71	□□□□□ -2.3
snR49	snR49	PRM6	Q04705	352 aa		0.71	□□□□□ -2.3
snR49	snR49	MRX8	Q05473	314 aa		0.71	□□□□□ -2.3
snR49	snR49	SIL1	Q08199	421 aa		0.71	□□□□□ -2.3
snR49	snR49	YDL199C	Q12407	687 aa		0.71	□□□□□ -2.3
snR49	snR49	PHO84	P25297	587 aa	Known RBP	0.7	□□□□□ -2.3
snR49	snR49	MKK1	P32490	508 aa		0.7	□□□□□ -2.3
snR49	snR49	YBR056W	P38081	501 aa		0.7	□□□□□ -2.3
snR49	snR49	AIP1	P46680	615 aa	Known RBP	0.7	□□□□□ -2.3
snR49	snR49	YDR115W	Q04598	105 aa		0.7	□□□□□ -2.3
snR49	snR49	YHC1	Q05900	231 aa	Known RBP	0.7	□□□□□ -2.3
snR49	snR49	YDL114W	Q07530	308 aa		0.7	□□□□□ -2.3
snR49	snR49	RKM1	Q08961	583 aa	Predicted RBP	0.7	□□□□□ -2.3
snR49	snR49	ATG34	Q12292	412 aa		0.7	□□□□□ -2.3
snR49	snR49	YCR024C-B	Q3E7Z8	88 aa		0.7	□□□□□ -2.3
snR49	snR49	AAC3	P18238	307 aa		0.69	□□□□□ -2.3
snR49	snR49	EPT1	P22140	391 aa		0.69	□□□□□ -2.3
snR49	snR49	BEM1	P29366	551 aa		0.69	□□□□□ -2.3
snR49	snR49	FUN26	P31381	517 aa		0.69	□□□□□ -2.3
snR49	snR49	MCM10	P32354	571 aa		0.69	□□□□□ -2.3
snR49	snR49	HXT3	P32466	567 aa	Known RBP	0.69	□□□□□ -2.3
snR49	snR49	TOA1	P32773	286 aa		0.69	□□□□□ -2.3
snR49	snR49	NOP16	P40007	231 aa	Known RBP	0.69	□□□□□ -2.3
snR49	snR49	RMD8	P43620	662 aa		0.69	□□□□□ -2.3
snR49	snR49	RGM1	Q00453	211 aa		0.69	□□□□□ -2.3
snR49	snR49	SNT309	Q06091	175 aa	Predicted RBP	0.69	□□□□□ -2.3
snR49	snR49	YLR177W	Q06251	628 aa		0.69	□□□□□ -2.3
snR49	snR49	LDS2	Q08218	356 aa		0.69	□□□□□ -2.3
snR49	snR49	NCA2	Q12374	616 aa		0.69	□□□□□ -2.3
snR49	snR49	YOR338W	Q99326	363 aa		0.69	□□□□□ -2.3
snR49	snR49	SNF6	P18888	332 aa		0.68	□□□□□ -2.3
snR49	snR49	ALK2	P32789	676 aa	Predicted RBP	0.68	□□□□□ -2.3
snR49	snR49	DBP7	P36120	742 aa	Known RBP	0.68	□□□□□ -2.3
snR49	snR49	ATP3	P38077	311 aa	Known RBP	0.68	□□□□□ -2.3
snR49	snR49	RRT13	P40042	185 aa		0.68	□□□□□ -2.3
snR49	snR49	KEG1	P43614	200 aa		0.68	□□□□□ -2.3
snR49	snR49	TOS3	P43637	560 aa		0.68	□□□□□ -2.3
snR49	snR49	MIX17	Q03667	156 aa		0.68	□□□□□ -2.3
snR49	snR49	URH1	Q04179	340 aa		0.68	□□□□□ -2.3
snR49	snR49	RQC1	Q05468	723 aa	Known RBP	0.68	□□□□□ -2.3
snR49	snR49	YOR376W	Q08900	122 aa		0.68	□□□□□ -2.3
snR49	snR49	GCN4	P03069	281 aa		0.67	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms