RNA–Protein interactions for RNA: snR3

snR3, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR3, Length 194 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR3	snR3	NRT1	Q08485	598 aa		4.6	□□□□□ -1.67
snR3	snR3	GEP3	Q08622	556 aa		4.6	□□□□□ -1.67
snR3	snR3	YPT1	P01123	206 aa	Known RBP	4.59	□□□□□ -1.67
snR3	snR3	ARG4	P04076	463 aa	Predicted RBP	4.59	□□□□□ -1.67
snR3	snR3	OPI3	P05375	206 aa		4.59	□□□□□ -1.67
snR3	snR3	IMA3	P0CW40	589 aa		4.59	□□□□□ -1.67
snR3	snR3	IMA4	P0CW41	589 aa		4.59	□□□□□ -1.67
snR3	snR3	CDC42	P19073	191 aa		4.59	□□□□□ -1.67
snR3	snR3	EXO70	P19658	623 aa		4.59	□□□□□ -1.67
snR3	snR3	RAD51	P25454	400 aa		4.59	□□□□□ -1.67
snR3	snR3	ADY2	P25613	283 aa		4.59	□□□□□ -1.67
snR3	snR3	BUB3	P26449	341 aa		4.59	□□□□□ -1.67
snR3	snR3	SUA5	P32579	426 aa		4.59	□□□□□ -1.67
snR3	snR3	EDE1	P34216	1381 aa		4.59	□□□□□ -1.67
snR3	snR3	RIM2	P38127	377 aa		4.59	□□□□□ -1.67
snR3	snR3	ALD5	P40047	520 aa	Known RBP	4.59	□□□□□ -1.67
snR3	snR3	LCP5	P40079	357 aa	Predicted RBP	4.59	□□□□□ -1.67
snR3	snR3	VRG4	P40107	337 aa		4.59	□□□□□ -1.67
snR3	snR3	FMC1	P40491	155 aa		4.59	□□□□□ -1.67
snR3	snR3	STE24	P47154	453 aa		4.59	□□□□□ -1.67
snR3	snR3	STB4	P50104	949 aa		4.59	□□□□□ -1.67
snR3	snR3	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
snR3	snR3	PET117	Q02771	107 aa		4.59	□□□□□ -1.67
snR3	snR3	SRL4	Q03085	281 aa		4.59	□□□□□ -1.67
snR3	snR3	TPO3	Q06451	622 aa		4.59	□□□□□ -1.67
snR3	snR3	TSR1	Q07381	788 aa	Known RBP	4.59	□□□□□ -1.67
snR3	snR3	LDS2	Q08218	356 aa		4.59	□□□□□ -1.67
snR3	snR3	IMA2	Q08295	589 aa		4.59	□□□□□ -1.67
snR3	snR3	SGT1	Q08446	395 aa		4.59	□□□□□ -1.67
snR3	snR3	SKI7	Q08491	747 aa	Predicted RBP	4.59	□□□□□ -1.67
snR3	snR3	ARP6	Q12509	438 aa		4.59	□□□□□ -1.67
snR3	snR3	GLT1	Q12680	2145 aa	Known RBP	4.59	□□□□□ -1.67
snR3	snR3	CLN3	P13365	580 aa		4.58	□□□□□ -1.68
snR3	snR3	HXT1	P32465	570 aa		4.58	□□□□□ -1.68
snR3	snR3	MNS1	P32906	549 aa		4.58	□□□□□ -1.68
snR3	snR3	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
snR3	snR3	LYS1	P38998	373 aa	RIP-Chip data	4.58	□□□□□ -1.68	not detected
snR3	snR3	YEL020C	P39994	560 aa		4.58	□□□□□ -1.68
snR3	snR3	IRC7	P43623	340 aa		4.58	□□□□□ -1.68
snR3	snR3	PMT5	P52867	743 aa		4.58	□□□□□ -1.68
snR3	snR3	PCP1	P53259	346 aa		4.58	□□□□□ -1.68
snR3	snR3	YNL134C	P53912	376 aa	Known RBP	4.58	□□□□□ -1.68
snR3	snR3	YPL068C	Q02749	293 aa		4.58	□□□□□ -1.68
snR3	snR3	SLD5	Q03406	294 aa		4.58	□□□□□ -1.68
snR3	snR3	AIM33	Q04516	312 aa		4.58	□□□□□ -1.68
snR3	snR3	BTS1	Q12051	335 aa		4.58	□□□□□ -1.68
snR3	snR3	YRM1	Q12340	786 aa		4.58	□□□□□ -1.68
snR3	snR3	YPR1	Q12458	312 aa		4.58	□□□□□ -1.68
snR3	snR3	PRP16	P15938	1071 aa	Predicted RBP	4.57	□□□□□ -1.68
snR3	snR3	RPL5	P26321	297 aa	Known RBP	4.57	□□□□□ -1.68
snR3	snR3	COX13	P32799	129 aa		4.57	□□□□□ -1.68
snR3	snR3	BMH2	P34730	273 aa	Known RBP	4.57	□□□□□ -1.68
snR3	snR3	YNK1	P36010	153 aa	Known RBP	4.57	□□□□□ -1.68
snR3	snR3	YBR056W	P38081	501 aa		4.57	□□□□□ -1.68
snR3	snR3	YHR045W	P38775	560 aa		4.57	□□□□□ -1.68
snR3	snR3	FET3	P38993	636 aa		4.57	□□□□□ -1.68
snR3	snR3	BTT1	P40314	149 aa	Predicted RBP	4.57	□□□□□ -1.68
snR3	snR3	PGA2	P53903	129 aa		4.57	□□□□□ -1.68
snR3	snR3	NUP100	Q02629	959 aa		4.57	□□□□□ -1.68
snR3	snR3	PNG1	Q02890	363 aa		4.57	□□□□□ -1.68
snR3	snR3	CAC2	Q04199	468 aa		4.57	□□□□□ -1.68
snR3	snR3	COQ11	Q05892	277 aa		4.57	□□□□□ -1.68
snR3	snR3	BUR2	Q05949	395 aa		4.57	□□□□□ -1.68
snR3	snR3	DIC1	Q06143	298 aa		4.57	□□□□□ -1.68
snR3	snR3	GDH1	P07262	454 aa	Known RBP	4.56	□□□□□ -1.68
snR3	snR3	CKI1	P20485	582 aa		4.56	□□□□□ -1.68
snR3	snR3	RNQ1	P25367	405 aa		4.56	□□□□□ -1.68
snR3	snR3	RPS2	P25443	254 aa	Known RBP	4.56	□□□□□ -1.68
snR3	snR3	VMA5	P31412	392 aa	Known RBP	4.56	□□□□□ -1.68
snR3	snR3	SKG6	P32900	734 aa	Predicted RBP	4.56	□□□□□ -1.68
snR3	snR3	PAC2	P39937	518 aa		4.56	□□□□□ -1.68
snR3	snR3	ISC1	P40015	477 aa	Known RBP	4.56	□□□□□ -1.68
snR3	snR3	YER085C	P40058	173 aa		4.56	□□□□□ -1.68
snR3	snR3	RTR1	P40084	226 aa	Predicted RBP	4.56	□□□□□ -1.68
snR3	snR3	YJL070C	P40361	888 aa		4.56	□□□□□ -1.68
snR3	snR3	CSM2	P40465	213 aa		4.56	□□□□□ -1.68
snR3	snR3	MSS2	P40990	351 aa		4.56	□□□□□ -1.68
snR3	snR3	VPS25	P47142	202 aa		4.56	□□□□□ -1.68
snR3	snR3	YIP1	P53039	248 aa		4.56	□□□□□ -1.68
snR3	snR3	FMP30	Q02883	468 aa		4.56	□□□□□ -1.68
snR3	snR3	RSN1	Q03516	953 aa		4.56	□□□□□ -1.68
snR3	snR3	SMP3	Q04174	516 aa		4.56	□□□□□ -1.68
snR3	snR3	AFT2	Q08957	416 aa		4.56	□□□□□ -1.68
snR3	snR3	RKM5	Q12367	367 aa		4.56	□□□□□ -1.68
snR3	snR3	MRPL8	P22353	238 aa		4.55	□□□□□ -1.68
snR3	snR3	DAL2	P25335	343 aa		4.55	□□□□□ -1.68
snR3	snR3	LSB5	P25369	354 aa		4.55	□□□□□ -1.68
snR3	snR3	CSM1	P25651	190 aa		4.55	□□□□□ -1.68
snR3	snR3	PPZ1	P26570	692 aa		4.55	□□□□□ -1.68
snR3	snR3	PRO3	P32263	286 aa	Known RBP	4.55	□□□□□ -1.68
snR3	snR3	ELM1	P32801	640 aa		4.55	□□□□□ -1.68
snR3	snR3	SKT5	P34226	696 aa		4.55	□□□□□ -1.68
snR3	snR3	RSM22	P36056	628 aa		4.55	□□□□□ -1.68
snR3	snR3	PHD1	P36093	366 aa		4.55	□□□□□ -1.68
snR3	snR3	YKR015C	P36111	568 aa		4.55	□□□□□ -1.68
snR3	snR3	SHO1	P40073	367 aa		4.55	□□□□□ -1.68
snR3	snR3	BNA6	P43619	295 aa		4.55	□□□□□ -1.68
snR3	snR3	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
snR3	snR3	MRX5	P47007	382 aa		4.55	□□□□□ -1.68
snR3	snR3	YGL082W	P53155	381 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 347.3 ms