RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17b	snR17b	TIM44	Q01852	431 aa		4.62	□□□□□ -1.67
snR17b	snR17b	PLB2	Q03674	706 aa		4.62	□□□□□ -1.67
snR17b	snR17b	BUR2	Q05949	395 aa		4.62	□□□□□ -1.67
snR17b	snR17b	FRE5	Q08908	694 aa		4.62	□□□□□ -1.67
snR17b	snR17b	YTM1	Q12024	460 aa	Predicted RBP	4.62	□□□□□ -1.67
snR17b	snR17b	YOR283W	Q12040	230 aa	Known RBP	4.62	□□□□□ -1.67
snR17b	snR17b	MSF1	P08425	469 aa		4.61	□□□□□ -1.67
snR17b	snR17b	MET8	P15807	274 aa		4.61	□□□□□ -1.67
snR17b	snR17b	CKS1	P20486	150 aa	Known RBP	4.61	□□□□□ -1.67
snR17b	snR17b	NAR1	P23503	491 aa	Known RBP	4.61	□□□□□ -1.67
snR17b	snR17b	BUD5	P25300	642 aa	Predicted RBP	4.61	□□□□□ -1.67
snR17b	snR17b	RRP7	P25368	297 aa	Predicted RBP	4.61	□□□□□ -1.67
snR17b	snR17b	RSA4	P25382	515 aa	Known RBP	4.61	□□□□□ -1.67
snR17b	snR17b	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
snR17b	snR17b	TKL2	P33315	681 aa		4.61	□□□□□ -1.67
snR17b	snR17b	CTF13	P35203	478 aa		4.61	□□□□□ -1.67
snR17b	snR17b	YKL151C	P36059	337 aa		4.61	□□□□□ -1.67
snR17b	snR17b	ALY1	P36117	915 aa		4.61	□□□□□ -1.67
snR17b	snR17b	YCR087C-A	P37263	153 aa		4.61	□□□□□ -1.67
snR17b	snR17b	TAT1	P38085	619 aa		4.61	□□□□□ -1.67
snR17b	snR17b	BMT2	P38278	337 aa		4.61	□□□□□ -1.67
snR17b	snR17b	COS111	P38308	924 aa		4.61	□□□□□ -1.67
snR17b	snR17b	KSP1	P38691	1029 aa	Known RBP	4.61	□□□□□ -1.67
snR17b	snR17b	YHR035W	P38769	630 aa		4.61	□□□□□ -1.67
snR17b	snR17b	CTF8	P38877	133 aa		4.61	□□□□□ -1.67
snR17b	snR17b	RAD55	P38953	406 aa		4.61	□□□□□ -1.67
snR17b	snR17b	MBP1	P39678	833 aa		4.61	□□□□□ -1.67
snR17b	snR17b	EMP65	P40085	556 aa		4.61	□□□□□ -1.67
snR17b	snR17b	KTR7	P40504	517 aa		4.61	□□□□□ -1.67
snR17b	snR17b	LSB6	P42951	607 aa		4.61	□□□□□ -1.67
snR17b	snR17b	CHA4	P43634	648 aa		4.61	□□□□□ -1.67
snR17b	snR17b	AAD10	P47182	288 aa		4.61	□□□□□ -1.67
snR17b	snR17b	SPT20	P50875	604 aa		4.61	□□□□□ -1.67
snR17b	snR17b	PYK2	P52489	506 aa	Known RBP	4.61	□□□□□ -1.67
snR17b	snR17b	PPT1	P53043	513 aa		4.61	□□□□□ -1.67
snR17b	snR17b	VPS73	P53142	486 aa	Known RBP	4.61	□□□□□ -1.67
snR17b	snR17b	BUD9	P53226	547 aa		4.61	□□□□□ -1.67
snR17b	snR17b	YGR067C	P53243	804 aa		4.61	□□□□□ -1.67
snR17b	snR17b	SOK2	P53438	785 aa	Predicted RBP	4.61	□□□□□ -1.67
snR17b	snR17b	MPS1	P54199	764 aa		4.61	□□□□□ -1.67
snR17b	snR17b	SPP1	Q03012	353 aa		4.61	□□□□□ -1.67
snR17b	snR17b	YDR132C	Q03900	495 aa		4.61	□□□□□ -1.67
snR17b	snR17b	SNX41	Q04053	625 aa		4.61	□□□□□ -1.67
snR17b	snR17b	SSL1	Q04673	461 aa	Predicted RBP	4.61	□□□□□ -1.67
snR17b	snR17b	YLR446W	Q06204	433 aa		4.61	□□□□□ -1.67
snR17b	snR17b	TPO3	Q06451	622 aa		4.61	□□□□□ -1.67
snR17b	snR17b	PLB3	Q08108	686 aa		4.61	□□□□□ -1.67
snR17b	snR17b	AEP3	Q12089	606 aa		4.61	□□□□□ -1.67
snR17b	snR17b	LYS21	Q12122	440 aa	Known RBP	4.61	□□□□□ -1.67
snR17b	snR17b	TY1A-DR3	Q12441	440 aa		4.61	□□□□□ -1.67
snR17b	snR17b	MHT1	Q12525	324 aa		4.61	□□□□□ -1.67
snR17b	snR17b	LAA1	P39526	2014 aa		4.6	□□□□□ -1.67
snR17b	snR17b	REP2	P03872	296 aa		4.6	□□□□□ -1.67
snR17b	snR17b	RPS9B	P05755	195 aa	Known RBP	4.6	□□□□□ -1.67
snR17b	snR17b	SIR2	P06700	562 aa		4.6	□□□□□ -1.67
snR17b	snR17b	SWI5	P08153	709 aa		4.6	□□□□□ -1.67
snR17b	snR17b	LAT1	P12695	482 aa	Known RBP	4.6	□□□□□ -1.67
snR17b	snR17b	ARO3	P14843	370 aa	Known RBP	4.6	□□□□□ -1.67
snR17b	snR17b	FUS3	P16892	353 aa	Known RBP	4.6	□□□□□ -1.67
snR17b	snR17b	RBK1	P25332	333 aa		4.6	□□□□□ -1.67
snR17b	snR17b	CWH43	P25618	953 aa		4.6	□□□□□ -1.67
snR17b	snR17b	CYS3	P31373	394 aa	Known RBP	4.6	□□□□□ -1.67
snR17b	snR17b	ACB1	P31787	87 aa		4.6	□□□□□ -1.67
snR17b	snR17b	PET127	P32606	800 aa		4.6	□□□□□ -1.67
snR17b	snR17b	YPT7	P32939	208 aa		4.6	□□□□□ -1.67
snR17b	snR17b	SRY1	P36007	326 aa		4.6	□□□□□ -1.67
snR17b	snR17b	ASC1	P38011	319 aa	Known RBP	4.6	□□□□□ -1.67
snR17b	snR17b	APL3	P38065	1025 aa		4.6	□□□□□ -1.67
snR17b	snR17b	POL12	P38121	705 aa	Predicted RBP	4.6	□□□□□ -1.67
snR17b	snR17b	LDB7	P38210	180 aa		4.6	□□□□□ -1.67
snR17b	snR17b	YHR202W	P38887	602 aa		4.6	□□□□□ -1.67
snR17b	snR17b	MSS4	P38994	779 aa		4.6	□□□□□ -1.67
snR17b	snR17b	LSM5	P40089	93 aa	Known RBP	4.6	□□□□□ -1.67
snR17b	snR17b	QDR2	P40474	542 aa		4.6	□□□□□ -1.67
snR17b	snR17b	GTS1	P40956	396 aa		4.6	□□□□□ -1.67
snR17b	snR17b	STE24	P47154	453 aa		4.6	□□□□□ -1.67
snR17b	snR17b	YJR124C	P47159	448 aa		4.6	□□□□□ -1.67
snR17b	snR17b	GCV1	P48015	400 aa		4.6	□□□□□ -1.67
snR17b	snR17b	YGR026W	P53217	278 aa		4.6	□□□□□ -1.67
snR17b	snR17b	BUD17	P53727	317 aa		4.6	□□□□□ -1.67
snR17b	snR17b	FYV6	P53913	173 aa		4.6	□□□□□ -1.67
snR17b	snR17b	TDA1	Q03533	586 aa		4.6	□□□□□ -1.67
snR17b	snR17b	MSS11	Q03825	758 aa		4.6	□□□□□ -1.67
snR17b	snR17b	RRP45	Q05636	305 aa	Known RBP	4.6	□□□□□ -1.67
snR17b	snR17b	SPO77	Q06134	477 aa		4.6	□□□□□ -1.67
snR17b	snR17b	YLR346C	Q06139	101 aa		4.6	□□□□□ -1.67
snR17b	snR17b	NUT2	Q06213	157 aa		4.6	□□□□□ -1.67
snR17b	snR17b	YPR172W	Q06608	200 aa		4.6	□□□□□ -1.67
snR17b	snR17b	YEH1	Q07804	573 aa		4.6	□□□□□ -1.67
snR17b	snR17b	YOR238W	Q08634	303 aa		4.6	□□□□□ -1.67
snR17b	snR17b	RTC5	Q12108	567 aa	Known RBP	4.6	□□□□□ -1.67
snR17b	snR17b	YRM1	Q12340	786 aa		4.6	□□□□□ -1.67
snR17b	snR17b	MRX4	Q12467	430 aa		4.6	□□□□□ -1.67
snR17b	snR17b	SFG1	Q12507	346 aa		4.6	□□□□□ -1.67
snR17b	snR17b	YCL012C	Q8J0M4	134 aa		4.6	□□□□□ -1.67
snR17b	snR17b	CDC21	P06785	304 aa		4.59	□□□□□ -1.67
snR17b	snR17b	CIT2	P08679	460 aa		4.59	□□□□□ -1.67
snR17b	snR17b	PET9	P18239	318 aa	Known RBP	4.59	□□□□□ -1.67
snR17b	snR17b	RDS2	P19541	446 aa	Known RBP	4.59	□□□□□ -1.67
snR17b	snR17b	PRP2	P20095	876 aa	Predicted RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms