RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	ABF1	P14164	731 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	RHB1	P25378	209 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	MSS51	P32335	436 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
TFB4	YPR056W	YSC83	P32792	385 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	SNU114	P36048	1008 aa	Known RBP	5.7	□□□□□ -1.5
TFB4	YPR056W	PFS1	P38872	237 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	ERG10	P41338	398 aa	Known RBP	5.7	□□□□□ -1.5
TFB4	YPR056W	KAP114	P53067	1004 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	MRPL50	P53724	139 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	EAF7	P53911	425 aa	Known RBP	5.7	□□□□□ -1.5
TFB4	YPR056W	MRP51	Q02950	344 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	PRM15	Q03262	622 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	GFD1	Q04839	188 aa	Known RBP	5.7	□□□□□ -1.5
TFB4	YPR056W	ARO10	Q06408	635 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	MRI1	Q06489	411 aa	Known RBP	5.7	□□□□□ -1.5
TFB4	YPR056W	CDD1	Q06549	142 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	SDO1	Q07953	250 aa	Known RBP	5.7	□□□□□ -1.5
TFB4	YPR056W	YOL075C	Q08234	1294 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	YDL109C	Q12103	647 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	BAG7	Q12128	409 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	PKH2	Q12236	1081 aa	Known RBP	5.7	□□□□□ -1.5
TFB4	YPR056W	RMD5	Q12508	421 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	SEY1	Q99287	776 aa		5.7	□□□□□ -1.5
TFB4	YPR056W	GDH1	P07262	454 aa	Known RBP	5.69	□□□□□ -1.5
TFB4	YPR056W	RPS16A	P0CX51	143 aa	Known RBP	5.69	□□□□□ -1.5
TFB4	YPR056W	RPS16B	P0CX52	143 aa	Known RBP	5.69	□□□□□ -1.5
TFB4	YPR056W	SEN2	P16658	377 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	SRP54	P20424	541 aa	Known RBP	5.69	□□□□□ -1.5
TFB4	YPR056W	GAC1	P28006	793 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	PEX3	P28795	441 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	RPC34	P32910	317 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	PRP18	P33411	251 aa	Predicted RBP	5.69	□□□□□ -1.5
TFB4	YPR056W	COS9	P36034	407 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	QDR3	P38227	689 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	VHC1	P38329	1120 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	BIG1	P38813	335 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	YHR122W	P38829	231 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
TFB4	YPR056W	ATG27	P46989	271 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	BNA3	P47039	444 aa	Known RBP	5.69	□□□□□ -1.5
TFB4	YPR056W	IBA57	P47158	497 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	IST1	P53843	298 aa	Predicted RBP	5.69	□□□□□ -1.5
TFB4	YPR056W	VAC7	P53950	1165 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	IZH1	Q03419	316 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	YDR222W	Q04925	415 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	ATG17	Q06410	417 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	NSE1	Q07913	336 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	DAP1	Q12091	152 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	ATG9	Q12142	997 aa		5.69	□□□□□ -1.5
TFB4	YPR056W	COX1	P00401	534 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	RHO2	P06781	192 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	RIP1	P08067	215 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	YLL053C	P0CD98	152 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	REC114	P32841	428 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	SOF1	P33750	489 aa	Known RBP	5.68	□□□□□ -1.5
TFB4	YPR056W	AST1	P35183	429 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	RIB1	P38066	345 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	YHR177W	P38867	453 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	SNL1	P40548	159 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	TMA22	P47089	198 aa	Predicted RBP	5.68	□□□□□ -1.5
TFB4	YPR056W	MSY1	P48527	492 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	FMP30	Q02883	468 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	YMR209C	Q03648	457 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	ARP10	Q04549	284 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	THI7	Q05998	598 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	SEC10	Q06245	871 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	TEN1	Q07921	160 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	GRE1	Q08969	168 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	SLF1	Q12034	447 aa	Known RBP	5.68	□□□□□ -1.5
TFB4	YPR056W	YPR1	Q12458	312 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	AI5_ALPHA	Q9ZZX1	630 aa		5.68	□□□□□ -1.5
TFB4	YPR056W	ADE4	P04046	510 aa	Known RBP	5.67	□□□□□ -1.5
TFB4	YPR056W	CHS1	P08004	1131 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	STE18	P18852	110 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	SNF6	P18888	332 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	RRT12	P25381	491 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	BCS1	P32839	456 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	CBT1	P36038	271 aa	Predicted RBP	5.67	□□□□□ -1.5
TFB4	YPR056W	GMH1	P36125	273 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	MRPL7	P36519	292 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	PCF11	P39081	626 aa	Predicted RBP	5.67	□□□□□ -1.5
TFB4	YPR056W	ECM10	P39987	644 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	PIG2	P40187	538 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	OPT1	P40897	799 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	PAC11	P40960	533 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	MRX5	P47007	382 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	NPA3	P47122	385 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	YDL186W	P48568	277 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	LSG1	P53145	640 aa	Known RBP	5.67	□□□□□ -1.5
TFB4	YPR056W	ADE16	P54113	591 aa	Known RBP	5.67	□□□□□ -1.5
TFB4	YPR056W	NUP116	Q02630	1113 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	YDR109C	Q04585	715 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	MDM30	Q05930	598 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	REX4	Q08237	289 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	AFT2	Q08957	416 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	MLH3	Q12083	715 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	YNL162W-A	Q3E7A8	72 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	AI5_BETA	Q9ZZX0	354 aa		5.67	□□□□□ -1.5
TFB4	YPR056W	ADH2	P00331	348 aa	Known RBP	5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms