RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W LCP5P40079 357 aaPredicted RBP6.2□□□□□ -1.42
CIT3YPR001W YMR134WP40207 237 aa6.2□□□□□ -1.42
CIT3YPR001W HAM1P47119 197 aaKnown RBP6.2□□□□□ -1.42
CIT3YPR001W PMT5P52867 743 aa6.2□□□□□ -1.42
CIT3YPR001W KAP114P53067 1004 aa6.2□□□□□ -1.42
CIT3YPR001W GIP3Q03016 1276 aa6.2□□□□□ -1.42
CIT3YPR001W ENT5Q03769 411 aaKnown RBP6.2□□□□□ -1.42
CIT3YPR001W YOL075CQ08234 1294 aa6.2□□□□□ -1.42
CIT3YPR001W RAX1Q08760 435 aa6.2□□□□□ -1.42
CIT3YPR001W CMC2Q3E7A4 109 aa6.2□□□□□ -1.42
CIT3YPR001W MES1P00958 751 aaKnown RBP6.19□□□□□ -1.42
CIT3YPR001W OPI3P05375 206 aa6.19□□□□□ -1.42
CIT3YPR001W SNF3P10870 884 aa6.19□□□□□ -1.42
CIT3YPR001W FRS2P15625 503 aaKnown RBP6.19□□□□□ -1.42
CIT3YPR001W PRP16P15938 1071 aaPredicted RBP6.19□□□□□ -1.42
CIT3YPR001W NUP1P20676 1076 aa6.19□□□□□ -1.42
CIT3YPR001W SLM5P25345 492 aaKnown RBP6.19□□□□□ -1.42
CIT3YPR001W HXT9P40885 567 aa6.19□□□□□ -1.42
CIT3YPR001W YFL015CP43578 164 aa6.19□□□□□ -1.42
CIT3YPR001W MRX5P47007 382 aa6.19□□□□□ -1.42
CIT3YPR001W HSH155P49955 971 aaKnown RBP6.19□□□□□ -1.42
CIT3YPR001W UBP8P50102 471 aa6.19□□□□□ -1.42
CIT3YPR001W DSL1P53847 754 aa6.19□□□□□ -1.42
CIT3YPR001W YNL247WP53852 767 aaKnown RBP6.19□□□□□ -1.42
CIT3YPR001W HXT11P54862 567 aa6.19□□□□□ -1.42
CIT3YPR001W RLI1Q03195 608 aaKnown RBP6.19□□□□□ -1.42
CIT3YPR001W MYO5Q04439 1219 aaKnown RBP6.19□□□□□ -1.42
CIT3YPR001W YPR022CQ12139 1133 aa6.19□□□□□ -1.42
CIT3YPR001W ERG4P25340 473 aa6.18□□□□□ -1.42
CIT3YPR001W COS9P36034 407 aa6.18□□□□□ -1.42
CIT3YPR001W ROT2P38138 954 aa6.18□□□□□ -1.42
CIT3YPR001W PPS1P38148 807 aa6.18□□□□□ -1.42
CIT3YPR001W DSE1P40077 573 aa6.18□□□□□ -1.42
CIT3YPR001W CDC1P40986 491 aa6.18□□□□□ -1.42
CIT3YPR001W TRS85P46944 698 aa6.18□□□□□ -1.42
CIT3YPR001W YJR154WP47181 346 aa6.18□□□□□ -1.42
CIT3YPR001W BUD32P53323 261 aa6.18□□□□□ -1.42
CIT3YPR001W SMM1P53720 384 aaKnown RBP6.18□□□□□ -1.42
CIT3YPR001W YIF1P53845 314 aaKnown RBP6.18□□□□□ -1.42
CIT3YPR001W IZH1Q03419 316 aa6.18□□□□□ -1.42
CIT3YPR001W SNT309Q06091 175 aaPredicted RBP6.18□□□□□ -1.42
CIT3YPR001W TMA10Q06177 86 aa6.18□□□□□ -1.42
CIT3YPR001W GMC2Q06201 188 aa6.18□□□□□ -1.42
CIT3YPR001W PAM18Q07914 168 aa6.18□□□□□ -1.42
CIT3YPR001W YOR029WQ12243 111 aa6.18□□□□□ -1.42
CIT3YPR001W RPS13P05756 151 aaKnown RBP6.17□□□□□ -1.42
CIT3YPR001W RPS16AP0CX51 143 aaKnown RBP6.17□□□□□ -1.42
CIT3YPR001W RPS16BP0CX52 143 aaKnown RBP6.17□□□□□ -1.42
CIT3YPR001W MATALPHA1P0CY06 175 aa6.17□□□□□ -1.42
CIT3YPR001W HMLALPHA1P0CY07 175 aa6.17□□□□□ -1.42
CIT3YPR001W NHP6BP11633 99 aaKnown RBP6.17□□□□□ -1.42
CIT3YPR001W PBN1P25580 416 aa6.17□□□□□ -1.42
CIT3YPR001W PPA2P28239 310 aa6.17□□□□□ -1.42
CIT3YPR001W BTT1P40314 149 aaPredicted RBP6.17□□□□□ -1.42
CIT3YPR001W NDC80P40460 691 aa6.17□□□□□ -1.42
CIT3YPR001W LYS12P40495 371 aaKnown RBP6.17□□□□□ -1.42
CIT3YPR001W TDA10P42938 290 aa6.17□□□□□ -1.42
CIT3YPR001W YGR168CP53293 376 aa6.17□□□□□ -1.42
CIT3YPR001W CPR8P53728 308 aa6.17□□□□□ -1.42
CIT3YPR001W YPL068CQ02749 293 aa6.17□□□□□ -1.42
CIT3YPR001W FMP30Q02883 468 aa6.17□□□□□ -1.42
CIT3YPR001W YDR387CQ04162 555 aa6.17□□□□□ -1.42
CIT3YPR001W SMP3Q04174 516 aa6.17□□□□□ -1.42
CIT3YPR001W YLR040CQ07988 224 aa6.17□□□□□ -1.42
CIT3YPR001W MCA1Q08601 432 aa6.17□□□□□ -1.42
CIT3YPR001W SLF1Q12034 447 aaKnown RBP6.17□□□□□ -1.42
CIT3YPR001W YLL056CQ12177 298 aa6.17□□□□□ -1.42
CIT3YPR001W YER145C-AA0A023PYF4 145 aa6.16□□□□□ -1.42
CIT3YPR001W TRP3P00937 484 aa6.16□□□□□ -1.42
CIT3YPR001W IMA3P0CW40 589 aa6.16□□□□□ -1.42
CIT3YPR001W IMA4P0CW41 589 aa6.16□□□□□ -1.42
CIT3YPR001W CLN3P13365 580 aa6.16□□□□□ -1.42
CIT3YPR001W COQ1P18900 473 aa6.16□□□□□ -1.42
CIT3YPR001W CKI1P20485 582 aa6.16□□□□□ -1.42
CIT3YPR001W GAS1P22146 559 aaKnown RBP6.16□□□□□ -1.42
CIT3YPR001W YSR3P23501 404 aa6.16□□□□□ -1.42
CIT3YPR001W APE2P32454 952 aaKnown RBP6.16□□□□□ -1.42
CIT3YPR001W YAL037WP39728 267 aa6.16□□□□□ -1.42
CIT3YPR001W HIT1P46973 164 aa6.16□□□□□ -1.42
CIT3YPR001W NOP13P53883 403 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
CIT3YPR001W MPS1P54199 764 aa6.16□□□□□ -1.42
CIT3YPR001W BET4Q00618 327 aa6.16□□□□□ -1.42
CIT3YPR001W IMA2Q08295 589 aa6.16□□□□□ -1.42
CIT3YPR001W ATG34Q12292 412 aa6.16□□□□□ -1.42
CIT3YPR001W RAD7P06779 565 aa6.15□□□□□ -1.42
CIT3YPR001W ALG7P07286 448 aa6.15□□□□□ -1.42
CIT3YPR001W MAS2P11914 482 aa6.15□□□□□ -1.42
CIT3YPR001W MET16P18408 261 aaPredicted RBP6.15□□□□□ -1.42
CIT3YPR001W ZRC1P20107 442 aa6.15□□□□□ -1.42
CIT3YPR001W STE11P23561 717 aa6.15□□□□□ -1.42
CIT3YPR001W YCR006CP25350 157 aa6.15□□□□□ -1.42
CIT3YPR001W ITR1P30605 584 aa6.15□□□□□ -1.42
CIT3YPR001W GCG1P32656 232 aaKnown RBP6.15□□□□□ -1.42
CIT3YPR001W SMX3P54999 86 aaPredicted RBP6.15□□□□□ -1.42
CIT3YPR001W RNT1Q02555 471 aa6.15□□□□□ -1.42
CIT3YPR001W UBX2Q04228 584 aa6.15□□□□□ -1.42
CIT3YPR001W PIG1Q06216 648 aa6.15□□□□□ -1.42
CIT3YPR001W SIA1Q12212 622 aa6.15□□□□□ -1.42
CIT3YPR001W LAG2Q92325 660 aa6.15□□□□□ -1.42
CIT3YPR001W SUC2P00724 532 aa6.15□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms