RNA–Protein interactions for RNA: YPL012W

RRP12, Transcript of Protein required for export of the ribosomal subunits, yeastyeast

Gene RRP12, Length 3,687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP12YPL012W ZIM17P42844 174 aa2.23□□□□□ -2.05
RRP12YPL012W GCN20P43535 752 aaKnown RBP2.23□□□□□ -2.05
RRP12YPL012W SCD6P45978 349 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05 RIP-Chip
RRP12YPL012W PNG1Q02890 363 aa2.23□□□□□ -2.05
RRP12YPL012W MSS11Q03825 758 aa2.23□□□□□ -2.05
RRP12YPL012W RRB1Q04225 511 aaKnown RBP2.23□□□□□ -2.05
RRP12YPL012W DIC1Q06143 298 aa2.23□□□□□ -2.05
RRP12YPL012W YPR078CQ06813 372 aa2.23□□□□□ -2.05
RRP12YPL012W NFI1Q12216 726 aa2.23□□□□□ -2.05
RRP12YPL012W PAR32Q12515 295 aaKnown RBP2.23□□□□□ -2.05
RRP12YPL012W YLR422WQ06409 1932 aa2.22□□□□□ -2.05
RRP12YPL012W EXO70P19658 623 aa2.22□□□□□ -2.05
RRP12YPL012W URE2P23202 354 aaKnown RBP2.22□□□□□ -2.05
RRP12YPL012W FUN19P28003 413 aaPredicted RBP2.22□□□□□ -2.05
RRP12YPL012W DEP1P31385 405 aa2.22□□□□□ -2.05
RRP12YPL012W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
RRP12YPL012W YPT53P36019 220 aa2.22□□□□□ -2.05
RRP12YPL012W ADH5P38113 351 aaKnown RBP2.22□□□□□ -2.05
RRP12YPL012W HSM3P38348 480 aa2.22□□□□□ -2.05
RRP12YPL012W RRP4P38792 359 aaKnown RBP2.22□□□□□ -2.05
RRP12YPL012W PET100P38958 111 aa2.22□□□□□ -2.05
RRP12YPL012W GDI1P39958 451 aaKnown RBP2.22□□□□□ -2.05
RRP12YPL012W JHD2P47156 728 aaPredicted RBP2.22□□□□□ -2.05
RRP12YPL012W CAF130P53280 1122 aaPredicted RBP2.22□□□□□ -2.05
RRP12YPL012W ZPR1P53303 486 aaKnown RBP2.22□□□□□ -2.05
RRP12YPL012W GPI15P53961 229 aa2.22□□□□□ -2.05
RRP12YPL012W YPL014WQ02606 381 aa2.22□□□□□ -2.05
RRP12YPL012W RRP9Q06506 573 aaKnown RBP2.22□□□□□ -2.05
RRP12YPL012W ECM30Q06673 1274 aa2.22□□□□□ -2.05
RRP12YPL012W SIL1Q08199 421 aa2.22□□□□□ -2.05
RRP12YPL012W SMF3Q12078 473 aaPredicted RBP2.22□□□□□ -2.05
RRP12YPL012W RPL6BP05739 176 aaKnown RBP2.22□□□□□ -2.05
RRP12YPL012W ERV1P27882 189 aa2.22□□□□□ -2.05
RRP12YPL012W ACH1P32316 526 aa2.22□□□□□ -2.05
RRP12YPL012W MRPL4P36517 319 aa2.22□□□□□ -2.05
RRP12YPL012W MIX23P38162 196 aa2.22□□□□□ -2.05
RRP12YPL012W YND1P40009 630 aa2.22□□□□□ -2.05
RRP12YPL012W ATF1P40353 525 aa2.22□□□□□ -2.05
RRP12YPL012W MIG2P53035 382 aa2.22□□□□□ -2.05
RRP12YPL012W ARO8P53090 500 aaKnown RBP2.22□□□□□ -2.05
RRP12YPL012W RMD9P53140 646 aaKnown RBP2.22□□□□□ -2.05
RRP12YPL012W MNP1P53163 194 aaPredicted RBP2.22□□□□□ -2.05
RRP12YPL012W GPI1P53306 609 aa2.22□□□□□ -2.05
RRP12YPL012W RRN9P53437 365 aa2.22□□□□□ -2.05
RRP12YPL012W RPL6AQ02326 176 aaKnown RBP2.22□□□□□ -2.05
RRP12YPL012W YPL107WQ02873 248 aa2.22□□□□□ -2.05
RRP12YPL012W YDR541CQ03049 344 aa2.22□□□□□ -2.05
RRP12YPL012W YMR130WQ04223 302 aa2.22□□□□□ -2.05
RRP12YPL012W RBA50Q04418 439 aa2.22□□□□□ -2.05
RRP12YPL012W RDR1Q08904 546 aa2.22□□□□□ -2.05
RRP12YPL012W ALG1P16661 449 aa2.22□□□□□ -2.05
RRP12YPL012W PSO2P30620 661 aa2.22□□□□□ -2.05
RRP12YPL012W ARA1P38115 344 aa2.22□□□□□ -2.05
RRP12YPL012W YNL320WP42840 284 aa2.22□□□□□ -2.05
RRP12YPL012W SHE4P51534 789 aa2.22□□□□□ -2.05
RRP12YPL012W MRP51Q02950 344 aa2.22□□□□□ -2.05
RRP12YPL012W RIM13Q03792 727 aa2.22□□□□□ -2.05
RRP12YPL012W URC2Q04411 772 aa2.22□□□□□ -2.05
RRP12YPL012W YOL019WQ08157 551 aa2.22□□□□□ -2.05
RRP12YPL012W CUE5Q08412 411 aaKnown RBP2.22□□□□□ -2.05
RRP12YPL012W YOR289WQ12012 251 aaPredicted RBP2.22□□□□□ -2.05
RRP12YPL012W RUD3Q12234 484 aaKnown RBP2.22□□□□□ -2.05
RRP12YPL012W PSY3Q12318 242 aa2.22□□□□□ -2.05
RRP12YPL012W RPB8P20436 146 aa2.21□□□□□ -2.06
RRP12YPL012W ECM25P32525 599 aa2.21□□□□□ -2.06
RRP12YPL012W DBP7P36120 742 aaKnown RBP2.21□□□□□ -2.06
RRP12YPL012W YJL070CP40361 888 aa2.21□□□□□ -2.06
RRP12YPL012W VPS25P47142 202 aa2.21□□□□□ -2.06
RRP12YPL012W SSN8P47821 323 aa2.21□□□□□ -2.06
RRP12YPL012W YPT32P51996 222 aaKnown RBP2.21□□□□□ -2.06
RRP12YPL012W YMR087WQ04299 284 aa2.21□□□□□ -2.06
RRP12YPL012W HEL2Q05580 639 aaKnown RBP2.21□□□□□ -2.06
RRP12YPL012W FUS2Q05670 677 aa2.21□□□□□ -2.06
RRP12YPL012W MSC3Q05812 728 aa2.21□□□□□ -2.06
RRP12YPL012W GGA1Q06336 557 aa2.21□□□□□ -2.06
RRP12YPL012W YLR413WQ06689 675 aa2.21□□□□□ -2.06
RRP12YPL012W YDL218WQ07629 317 aa2.21□□□□□ -2.06
RRP12YPL012W AFT2Q08957 416 aa2.21□□□□□ -2.06
RRP12YPL012W SRL2Q12020 392 aa2.21□□□□□ -2.06
RRP12YPL012W NCA2Q12374 616 aa2.21□□□□□ -2.06
RRP12YPL012W CYB2P00175 591 aa2.21□□□□□ -2.06
RRP12YPL012W DBP3P20447 523 aaKnown RBP2.21□□□□□ -2.06
RRP12YPL012W UBA1P22515 1024 aaKnown RBP2.21□□□□□ -2.06
RRP12YPL012W VPH2P32341 215 aa2.21□□□□□ -2.06
RRP12YPL012W ERG1P32476 496 aaKnown RBP2.21□□□□□ -2.06
RRP12YPL012W RGT1P32862 1170 aa2.21□□□□□ -2.06
RRP12YPL012W VHC1P38329 1120 aa2.21□□□□□ -2.06
RRP12YPL012W VPS45P38932 577 aa2.21□□□□□ -2.06
RRP12YPL012W YMR124WP39523 943 aaKnown RBP2.21□□□□□ -2.06
RRP12YPL012W MST28P39552 234 aa2.21□□□□□ -2.06
RRP12YPL012W YHB1P39676 399 aaKnown RBP2.21□□□□□ -2.06
RRP12YPL012W MIC19P43594 170 aa2.21□□□□□ -2.06
RRP12YPL012W CWC22P53333 577 aaKnown RBP2.21□□□□□ -2.06
RRP12YPL012W RET3P53600 189 aa2.21□□□□□ -2.06
RRP12YPL012W SMM1P53720 384 aaKnown RBP2.21□□□□□ -2.06
RRP12YPL012W YNL040WP53960 456 aaPredicted RBP2.21□□□□□ -2.06
RRP12YPL012W SWP1Q02795 286 aa2.21□□□□□ -2.06
RRP12YPL012W AIM32Q04689 311 aa2.21□□□□□ -2.06
RRP12YPL012W IPK1Q06667 281 aa2.21□□□□□ -2.06
RRP12YPL012W DCI1Q08558 271 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms