RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W AIM24P47127 394 aa3.64□□□□□ -1.83
VAM3YOR106W VHS1Q03785 461 aa3.64□□□□□ -1.83
VAM3YOR106W SNT309Q06091 175 aaPredicted RBP3.64□□□□□ -1.83
VAM3YOR106W LOT6Q07923 191 aa3.64□□□□□ -1.83
VAM3YOR106W VPS54Q12071 889 aa3.64□□□□□ -1.83
VAM3YOR106W EAF3Q12432 401 aa3.64□□□□□ -1.83
VAM3YOR106W MTR10Q99189 972 aa3.64□□□□□ -1.83
VAM3YOR106W PSK1P31374 1356 aa3.63□□□□□ -1.83
VAM3YOR106W MST27P53176 234 aa3.63□□□□□ -1.83
VAM3YOR106W YGR250CP53316 781 aaKnown RBP3.63□□□□□ -1.83
VAM3YOR106W RPT4P53549 437 aaKnown RBP3.63□□□□□ -1.83
VAM3YOR106W RNY1Q02933 434 aaKnown RBP3.63□□□□□ -1.83
VAM3YOR106W MMR1Q06324 491 aa3.63□□□□□ -1.83
VAM3YOR106W CAP2P13517 287 aa3.62□□□□□ -1.83
VAM3YOR106W EXG1P23776 448 aaKnown RBP3.62□□□□□ -1.83
VAM3YOR106W DPH5P32469 300 aaPredicted RBP3.62□□□□□ -1.83
VAM3YOR106W SLM4P38247 162 aa3.62□□□□□ -1.83
VAM3YOR106W YER079WP40052 210 aaKnown RBP3.62□□□□□ -1.83
VAM3YOR106W SIM1P40472 476 aa3.62□□□□□ -1.83
VAM3YOR106W EGT2P42835 1041 aa3.62□□□□□ -1.83
VAM3YOR106W TOS3P43637 560 aa3.62□□□□□ -1.83
VAM3YOR106W CRH1P53301 507 aa3.62□□□□□ -1.83
VAM3YOR106W MKC7P53379 596 aa3.62□□□□□ -1.83
VAM3YOR106W YMR102CQ03177 834 aa3.62□□□□□ -1.83
VAM3YOR106W VPS72Q03388 795 aa3.62□□□□□ -1.83
VAM3YOR106W PIS1P06197 220 aaKnown RBP3.61□□□□□ -1.83
VAM3YOR106W ADK2P26364 225 aa3.61□□□□□ -1.83
VAM3YOR106W CYS4P32582 507 aaKnown RBP3.61□□□□□ -1.83
VAM3YOR106W BAT1P38891 393 aaKnown RBP3.61□□□□□ -1.83
VAM3YOR106W GAT2P40209 560 aa3.61□□□□□ -1.83
VAM3YOR106W YPS6P40583 537 aa3.61□□□□□ -1.83
VAM3YOR106W RRP46P53256 223 aaPredicted RBP3.61□□□□□ -1.83
VAM3YOR106W RPN9Q04062 393 aaKnown RBP3.61□□□□□ -1.83
VAM3YOR106W YET2Q04210 160 aa3.61□□□□□ -1.83
VAM3YOR106W ERB1Q04660 807 aaKnown RBP3.61□□□□□ -1.83
VAM3YOR106W COX3P00420 269 aa3.6□□□□□ -1.83
VAM3YOR106W URA7P28274 579 aaKnown RBP3.6□□□□□ -1.83
VAM3YOR106W YER186CP40101 306 aa3.6□□□□□ -1.83
VAM3YOR106W ATG18P43601 500 aa3.6□□□□□ -1.83
VAM3YOR106W BNS1P50084 137 aa3.6□□□□□ -1.83
VAM3YOR106W SPC19Q03954 165 aa3.6□□□□□ -1.83
VAM3YOR106W PRM6Q04705 352 aa3.6□□□□□ -1.83
VAM3YOR106W YPQ1Q12010 308 aa3.6□□□□□ -1.83
VAM3YOR106W RUP1Q12242 671 aa3.6□□□□□ -1.83
VAM3YOR106W YBL111CQ3E7Y5 667 aa3.6□□□□□ -1.83
VAM3YOR106W COX4P04037 155 aa3.59□□□□□ -1.83
VAM3YOR106W DST1P07273 309 aa3.59□□□□□ -1.83
VAM3YOR106W CDC50P25656 391 aa3.59□□□□□ -1.83
VAM3YOR106W ERV1P27882 189 aa3.59□□□□□ -1.83
VAM3YOR106W HEL1P36113 551 aa3.59□□□□□ -1.83
VAM3YOR106W ASC1P38011 319 aaKnown RBP3.59□□□□□ -1.83
VAM3YOR106W MRPS9P38120 278 aa3.59□□□□□ -1.83
VAM3YOR106W OLA1P38219 394 aaKnown RBP3.59□□□□□ -1.83
VAM3YOR106W OM14P38325 134 aa3.59□□□□□ -1.83
VAM3YOR106W YHK8P38776 514 aa3.59□□□□□ -1.83
VAM3YOR106W VHS2P40463 436 aa3.59□□□□□ -1.83
VAM3YOR106W TOM22P49334 152 aa3.59□□□□□ -1.83
VAM3YOR106W CLD1P53264 445 aa3.59□□□□□ -1.83
VAM3YOR106W TDA1Q03533 586 aa3.59□□□□□ -1.83
VAM3YOR106W ECM11Q04110 302 aa3.59□□□□□ -1.83
VAM3YOR106W HTZ1Q12692 134 aaKnown RBP3.59□□□□□ -1.83
VAM3YOR106W ATP1P07251 545 aaKnown RBP3.58□□□□□ -1.84
VAM3YOR106W CLB1P24868 471 aa3.58□□□□□ -1.84
VAM3YOR106W SEO1P39709 593 aa3.58□□□□□ -1.84
VAM3YOR106W YNL208WP40159 199 aaKnown RBP3.58□□□□□ -1.84
VAM3YOR106W MMF1P40185 145 aaKnown RBP3.58□□□□□ -1.84
VAM3YOR106W MRPS16Q02608 121 aa3.58□□□□□ -1.84
VAM3YOR106W PRP42Q03776 544 aaKnown RBP3.58□□□□□ -1.84
VAM3YOR106W DNL4Q08387 944 aaPredicted RBP3.58□□□□□ -1.84
VAM3YOR106W CDC21P06785 304 aa3.57□□□□□ -1.84
VAM3YOR106W AEP3Q12089 606 aa3.57□□□□□ -1.84
VAM3YOR106W NAG1Q8TGN9 163 aa3.57□□□□□ -1.84
VAM3YOR106W POM152P39685 1337 aa3.56□□□□□ -1.84
VAM3YOR106W PDX1P16451 410 aa3.56□□□□□ -1.84
VAM3YOR106W YEF1P32622 495 aa3.56□□□□□ -1.84
VAM3YOR106W COX13P32799 129 aa3.56□□□□□ -1.84
VAM3YOR106W GPI18P38211 433 aa3.56□□□□□ -1.84
VAM3YOR106W PTI1P39927 425 aaPredicted RBP3.56□□□□□ -1.84
VAM3YOR106W ARO3P14843 370 aaKnown RBP3.55□□□□□ -1.84
VAM3YOR106W RPC53P25441 422 aa3.55□□□□□ -1.84
VAM3YOR106W HSP104P31539 908 aaKnown RBP3.55□□□□□ -1.84
VAM3YOR106W SKN1P33336 771 aa3.55□□□□□ -1.84
VAM3YOR106W YKL097CP34245 136 aa3.55□□□□□ -1.84
VAM3YOR106W ZTA1P38230 334 aaKnown RBP3.55□□□□□ -1.84
VAM3YOR106W SPR6Q01684 191 aa3.55□□□□□ -1.84
VAM3YOR106W RMT2Q03305 412 aa3.55□□□□□ -1.84
VAM3YOR106W YDR131CQ03899 556 aa3.55□□□□□ -1.84
VAM3YOR106W YCR024C-BQ3E7Z8 88 aa3.55□□□□□ -1.84
VAM3YOR106W CPR2P23285 205 aa3.54□□□□□ -1.84
VAM3YOR106W RAD5P32849 1169 aaPredicted RBP3.54□□□□□ -1.84
VAM3YOR106W ANR2P36090 516 aaPredicted RBP3.54□□□□□ -1.84
VAM3YOR106W TIM17P39515 158 aa3.54□□□□□ -1.84
VAM3YOR106W SER3P40054 469 aa3.54□□□□□ -1.84
VAM3YOR106W CHS6P40955 746 aa3.54□□□□□ -1.84
VAM3YOR106W ZIM17P42844 174 aa3.54□□□□□ -1.84
VAM3YOR106W YPS5P53057 165 aa3.54□□□□□ -1.84
VAM3YOR106W PIB2P53191 635 aa3.54□□□□□ -1.84
VAM3YOR106W MFG1Q07684 458 aa3.54□□□□□ -1.84
VAM3YOR106W RIM1P32445 135 aaKnown RBP3.53□□□□□ -1.84
VAM3YOR106W INM1P38710 295 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms