RNA–Protein interactions for RNA: YOL122C

SMF1, Transcript of Divalent metal ion transporter, yeast

Gene SMF1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMF1	YOL122C	ALF1	P53904	254 aa		4.16	□□□□□ -1.74
SMF1	YOL122C	HEF3	P53978	1044 aa	Known RBP	4.16	□□□□□ -1.74
SMF1	YOL122C	YMR010W	Q03687	405 aa		4.16	□□□□□ -1.74
SMF1	YOL122C	ACL4	Q03771	387 aa		4.16	□□□□□ -1.74
SMF1	YOL122C	YLL007C	Q07799	665 aa		4.16	□□□□□ -1.74
SMF1	YOL122C	YPR022C	Q12139	1133 aa		4.16	□□□□□ -1.74
SMF1	YOL122C	RPO41	P13433	1351 aa	Known RBP	4.16	□□□□□ -1.74
SMF1	YOL122C	BNR1	P40450	1375 aa		4.16	□□□□□ -1.74
SMF1	YOL122C	DUR1,2	P32528	1835 aa	Known RBP	4.16	□□□□□ -1.74
SMF1	YOL122C	HIP1	P06775	603 aa		4.15	□□□□□ -1.74
SMF1	YOL122C	SNA3	P14359	133 aa		4.15	□□□□□ -1.74
SMF1	YOL122C	GLK1	P17709	500 aa	Known RBP	4.15	□□□□□ -1.74
SMF1	YOL122C	MRPL8	P22353	238 aa		4.15	□□□□□ -1.74
SMF1	YOL122C	RVS161	P25343	265 aa	Known RBP	4.15	□□□□□ -1.74
SMF1	YOL122C	ASF2	P32448	525 aa	Predicted RBP	4.15	□□□□□ -1.74
SMF1	YOL122C	YBL010C	P32788	280 aa		4.15	□□□□□ -1.74
SMF1	YOL122C	YKR015C	P36111	568 aa		4.15	□□□□□ -1.74
SMF1	YOL122C	KAP104	P38217	918 aa	Known RBP	4.15	□□□□□ -1.74
SMF1	YOL122C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
SMF1	YOL122C	TIF4631	P39935	952 aa	Known RBP	4.15	□□□□□ -1.74
SMF1	YOL122C	RTR1	P40084	226 aa	Predicted RBP	4.15	□□□□□ -1.74
SMF1	YOL122C	RTS2	P40962	232 aa		4.15	□□□□□ -1.74
SMF1	YOL122C	SNG1	P46950	547 aa		4.15	□□□□□ -1.74
SMF1	YOL122C	ECM27	P47144	725 aa		4.15	□□□□□ -1.74
SMF1	YOL122C	BUD32	P53323	261 aa		4.15	□□□□□ -1.74
SMF1	YOL122C	MRPL50	P53724	139 aa		4.15	□□□□□ -1.74
SMF1	YOL122C	PRO2	P54885	456 aa	Known RBP	4.15	□□□□□ -1.74
SMF1	YOL122C	EGD1	Q02642	157 aa	Known RBP	4.15	□□□□□ -1.74
SMF1	YOL122C	RMI1	Q02685	241 aa		4.15	□□□□□ -1.74
SMF1	YOL122C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
SMF1	YOL122C	VPS54	Q12071	889 aa		4.15	□□□□□ -1.74
SMF1	YOL122C	YOS9	Q99220	542 aa		4.15	□□□□□ -1.74
SMF1	YOL122C	RPL24A	P04449	155 aa	Known RBP	4.15	□□□□□ -1.75
SMF1	YOL122C	KRE5	P22023	1365 aa		4.15	□□□□□ -1.75
SMF1	YOL122C	AFG1	P32317	509 aa		4.15	□□□□□ -1.75
SMF1	YOL122C	FLO10	P36170	1169 aa		4.15	□□□□□ -1.75
SMF1	YOL122C	YBR062C	P38239	180 aa		4.15	□□□□□ -1.75
SMF1	YOL122C	RTC3	P38804	111 aa	Predicted RBP	4.15	□□□□□ -1.75
SMF1	YOL122C	TFG2	P41896	400 aa	Predicted RBP	4.15	□□□□□ -1.75
SMF1	YOL122C	QRI1	P43123	477 aa	Known RBP	4.15	□□□□□ -1.75
SMF1	YOL122C	YFH7	P43591	353 aa		4.15	□□□□□ -1.75
SMF1	YOL122C	BPL1	P48445	690 aa	Predicted RBP	4.15	□□□□□ -1.75
SMF1	YOL122C	YGL138C	P53122	345 aa		4.15	□□□□□ -1.75
SMF1	YOL122C	DUG3	P53871	357 aa		4.15	□□□□□ -1.75
SMF1	YOL122C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
SMF1	YOL122C	RRP45	Q05636	305 aa	Known RBP	4.15	□□□□□ -1.75
SMF1	YOL122C	THP1	Q08231	455 aa		4.15	□□□□□ -1.75
SMF1	YOL122C	DCI1	Q08558	271 aa		4.15	□□□□□ -1.75
SMF1	YOL122C	DAS2	Q12084	232 aa		4.15	□□□□□ -1.75
SMF1	YOL122C	SNU23	Q12368	194 aa	Predicted RBP	4.15	□□□□□ -1.75
SMF1	YOL122C	CMC2	Q3E7A4	109 aa		4.15	□□□□□ -1.75
SMF1	YOL122C	DDP1	Q99321	188 aa	Known RBP	4.15	□□□□□ -1.75
SMF1	YOL122C	RRP5	Q05022	1729 aa	Known RBP	4.14	□□□□□ -1.75
SMF1	YOL122C	POM152	P39685	1337 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	RAD52	P06778	471 aa	Known RBP	4.14	□□□□□ -1.75
SMF1	YOL122C	RPL1A	P0CX43	217 aa	Known RBP	4.14	□□□□□ -1.75
SMF1	YOL122C	RPL1B	P0CX44	217 aa	Known RBP	4.14	□□□□□ -1.75
SMF1	YOL122C	ZIP1	P31111	875 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	TPO5	P36029	618 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	TCM62	P38228	572 aa	Known RBP	4.14	□□□□□ -1.75
SMF1	YOL122C	YHR210C	P38893	341 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	COS5	P47187	383 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	CGR1	P53188	120 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	RRP46	P53256	223 aa	Predicted RBP	4.14	□□□□□ -1.75
SMF1	YOL122C	ATP23	P53722	227 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	TOF1	P53840	1238 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	SKO1	Q02100	647 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	SRL4	Q03085	281 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	IVY1	Q04934	453 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	TAF9	Q05027	157 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	NDE2	Q07500	545 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	COS7	Q07788	383 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	DIS3	Q08162	1001 aa	Known RBP	4.14	□□□□□ -1.75
SMF1	YOL122C	YOR365C	Q08844	703 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	MED2	Q12124	431 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	TAD3	Q9URQ3	322 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	SPO14	P36126	1683 aa		4.14	□□□□□ -1.75
SMF1	YOL122C	CDC8	P00572	216 aa		4.13	□□□□□ -1.75
SMF1	YOL122C	IPP1	P00817	287 aa	Known RBP	4.13	□□□□□ -1.75
SMF1	YOL122C	ARG4	P04076	463 aa	Predicted RBP	4.13	□□□□□ -1.75
SMF1	YOL122C	CBP6	P07253	162 aa	Predicted RBP	4.13	□□□□□ -1.75
SMF1	YOL122C	SEC63	P14906	663 aa		4.13	□□□□□ -1.75
SMF1	YOL122C	RAD57	P25301	460 aa		4.13	□□□□□ -1.75
SMF1	YOL122C	RPS2	P25443	254 aa	Known RBP	4.13	□□□□□ -1.75
SMF1	YOL122C	RAD14	P28519	371 aa		4.13	□□□□□ -1.75
SMF1	YOL122C	ACH1	P32316	526 aa		4.13	□□□□□ -1.75
SMF1	YOL122C	SHP1	P34223	423 aa		4.13	□□□□□ -1.75
SMF1	YOL122C	YKL023W	P36103	277 aa	Known RBP	4.13	□□□□□ -1.75
SMF1	YOL122C	LAS1	P36146	502 aa	Predicted RBP	4.13	□□□□□ -1.75
SMF1	YOL122C	ROT2	P38138	954 aa		4.13	□□□□□ -1.75
SMF1	YOL122C	PAC11	P40960	533 aa		4.13	□□□□□ -1.75
SMF1	YOL122C	IRC7	P43623	340 aa		4.13	□□□□□ -1.75
SMF1	YOL122C	COS6	P53344	381 aa		4.13	□□□□□ -1.75
SMF1	YOL122C	SMM1	P53720	384 aa	Known RBP	4.13	□□□□□ -1.75
SMF1	YOL122C	MPS1	P54199	764 aa		4.13	□□□□□ -1.75
SMF1	YOL122C	BUD3	P25558	1636 aa		4.13	□□□□□ -1.75
SMF1	YOL122C	YSP2	Q06681	1438 aa		4.13	□□□□□ -1.75
SMF1	YOL122C	YLR278C	Q05854	1341 aa		4.13	□□□□□ -1.75
SMF1	YOL122C	RPL6B	P05739	176 aa	Known RBP	4.12	□□□□□ -1.75
SMF1	YOL122C	STE3	P06783	470 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms