RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMS1	YNL082W	SEC1	P30619	724 aa	Known RBP	3.78	□□□□□ -1.8
PMS1	YNL082W	APE2	P32454	952 aa	Known RBP	3.78	□□□□□ -1.8
PMS1	YNL082W	ASN2	P49090	572 aa	Known RBP	3.78	□□□□□ -1.8
PMS1	YNL082W	DIG1	Q03063	452 aa	Known RBP	3.78	□□□□□ -1.8
PMS1	YNL082W	NUP53	Q03790	475 aa		3.78	□□□□□ -1.8
PMS1	YNL082W	CUR1	Q06469	252 aa		3.78	□□□□□ -1.8
PMS1	YNL082W	RTC5	Q12108	567 aa	Known RBP	3.78	□□□□□ -1.8
PMS1	YNL082W	MDY2	Q12285	212 aa		3.78	□□□□□ -1.8
PMS1	YNL082W	NDI1	P32340	513 aa		3.77	□□□□□ -1.81
PMS1	YNL082W	YCR041W	P37265	110 aa		3.77	□□□□□ -1.81
PMS1	YNL082W	SPC97	P38863	823 aa		3.77	□□□□□ -1.81
PMS1	YNL082W	YIL089W	P40500	205 aa		3.77	□□□□□ -1.81
PMS1	YNL082W	GWT1	P47026	490 aa		3.77	□□□□□ -1.81
PMS1	YNL082W	RRN9	P53437	365 aa		3.77	□□□□□ -1.81
PMS1	YNL082W	FRE4	P53746	719 aa		3.77	□□□□□ -1.81
PMS1	YNL082W	SRL2	Q12020	392 aa		3.77	□□□□□ -1.81
PMS1	YNL082W	SRV2	P17555	526 aa	Known RBP	3.77	□□□□□ -1.81
PMS1	YNL082W	YND1	P40009	630 aa		3.77	□□□□□ -1.81
PMS1	YNL082W	ERG13	P54839	491 aa	Known RBP	3.77	□□□□□ -1.81
PMS1	YNL082W	ECI1	Q05871	280 aa		3.77	□□□□□ -1.81
PMS1	YNL082W	MRPL51	Q06090	140 aa	Predicted RBP	3.77	□□□□□ -1.81
PMS1	YNL082W	SKI7	Q08491	747 aa	Predicted RBP	3.77	□□□□□ -1.81
PMS1	YNL082W	ATG34	Q12292	412 aa		3.77	□□□□□ -1.81
PMS1	YNL082W	HNM1	P19807	563 aa		3.76	□□□□□ -1.81
PMS1	YNL082W	VPS17	P32913	551 aa		3.76	□□□□□ -1.81
PMS1	YNL082W	XBP1	P40489	647 aa		3.76	□□□□□ -1.81
PMS1	YNL082W	AZF1	P41696	914 aa		3.76	□□□□□ -1.81
PMS1	YNL082W	MMT1	Q03218	510 aa		3.76	□□□□□ -1.81
PMS1	YNL082W	SEG1	Q04279	960 aa		3.76	□□□□□ -1.81
PMS1	YNL082W	HCR1	Q05775	265 aa	Known RBP	3.76	□□□□□ -1.81
PMS1	YNL082W	COQ11	Q05892	277 aa		3.76	□□□□□ -1.81
PMS1	YNL082W	SEC62	P21825	274 aa		3.76	□□□□□ -1.81
PMS1	YNL082W	CYS4	P32582	507 aa	Known RBP	3.76	□□□□□ -1.81
PMS1	YNL082W	YJL070C	P40361	888 aa		3.76	□□□□□ -1.81
PMS1	YNL082W	AVT4	P50944	713 aa		3.76	□□□□□ -1.81
PMS1	YNL082W	PIB2	P53191	635 aa		3.76	□□□□□ -1.81
PMS1	YNL082W	ECM18	Q04623	453 aa		3.76	□□□□□ -1.81
PMS1	YNL082W	YNL162W-A	Q3E7A8	72 aa		3.76	□□□□□ -1.81
PMS1	YNL082W	HSP104	P31539	908 aa	Known RBP	3.75	□□□□□ -1.81
PMS1	YNL082W	OLA1	P38219	394 aa	Known RBP	3.75	□□□□□ -1.81
PMS1	YNL082W	RPA34	P47006	233 aa	Predicted RBP	3.75	□□□□□ -1.81
PMS1	YNL082W	VPS63	O13549	108 aa		3.75	□□□□□ -1.81
PMS1	YNL082W	YCR100C	P25606	316 aa		3.75	□□□□□ -1.81
PMS1	YNL082W	YHR122W	P38829	231 aa		3.75	□□□□□ -1.81
PMS1	YNL082W	HMS2	P47175	358 aa		3.75	□□□□□ -1.81
PMS1	YNL082W	RTT102	P53330	157 aa		3.75	□□□□□ -1.81
PMS1	YNL082W	DSL1	P53847	754 aa		3.75	□□□□□ -1.81
PMS1	YNL082W	AFT2	Q08957	416 aa		3.75	□□□□□ -1.81
PMS1	YNL082W	GCN2	P15442	1659 aa		3.75	□□□□□ -1.81
PMS1	YNL082W	SRB8	P25648	1427 aa		3.75	□□□□□ -1.81
PMS1	YNL082W	PDE2	P06776	526 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	CDC23	P16522	626 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	ZUO1	P32527	433 aa	Known RBP	3.74	□□□□□ -1.81
PMS1	YNL082W	YER079W	P40052	210 aa	Known RBP	3.74	□□□□□ -1.81
PMS1	YNL082W	AIM20	P40451	204 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	STE24	P47154	453 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	YNR048W	P53740	393 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	ADA2	Q02336	434 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	IRC15	Q02733	499 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	GRX3	Q03835	250 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	ORM2	Q06144	216 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	CSR2	Q12734	1121 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	GRR1	P24814	1151 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	RIB7	P33312	244 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	YIR014W	P40570	242 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	PSA1	P41940	361 aa	Known RBP	3.74	□□□□□ -1.81
PMS1	YNL082W	LOC1	P43586	204 aa	Predicted RBP	3.74	□□□□□ -1.81
PMS1	YNL082W	MPS1	P54199	764 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	BUG1	Q12191	341 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	NUP192	P47054	1683 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	CDC21	P06785	304 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	RNA1	P11745	407 aa	Known RBP	3.74	□□□□□ -1.81
PMS1	YNL082W	DBR1	P24309	405 aa	Known RBP	3.74	□□□□□ -1.81
PMS1	YNL082W	LSB5	P25369	354 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	PCF11	P39081	626 aa	Predicted RBP	3.74	□□□□□ -1.81
PMS1	YNL082W	PAC11	P40960	533 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	PNG1	Q02890	363 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	ODC1	Q03028	310 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	NBL1	Q3E7Y6	73 aa		3.74	□□□□□ -1.81
PMS1	YNL082W	HIS4	P00815	799 aa	Known RBP	3.73	□□□□□ -1.81
PMS1	YNL082W	RPC40	P07703	335 aa	Known RBP	3.73	□□□□□ -1.81
PMS1	YNL082W	YCR043C	P25361	127 aa		3.73	□□□□□ -1.81
PMS1	YNL082W	GLC7	P32598	312 aa	Known RBP	3.73	□□□□□ -1.81
PMS1	YNL082W	LYS1	P38998	373 aa	RIP-Chip data	3.73	□□□□□ -1.81	not detected
PMS1	YNL082W	RPR2	P40571	144 aa		3.73	□□□□□ -1.81
PMS1	YNL082W	YLL056C	Q12177	298 aa		3.73	□□□□□ -1.81
PMS1	YNL082W	LSP1	Q12230	341 aa	Known RBP	3.73	□□□□□ -1.81
PMS1	YNL082W	RUP1	Q12242	671 aa		3.73	□□□□□ -1.81
PMS1	YNL082W	SRN2	Q99176	213 aa		3.73	□□□□□ -1.81
PMS1	YNL082W	SKN1	P33336	771 aa		3.73	□□□□□ -1.81
PMS1	YNL082W	RTT105	P40063	208 aa		3.73	□□□□□ -1.81
PMS1	YNL082W	YAP7	Q08182	245 aa		3.73	□□□□□ -1.81
PMS1	YNL082W	RPT5	P33297	434 aa	Known RBP	3.72	□□□□□ -1.81
PMS1	YNL082W	ARC40	P38328	384 aa	Known RBP	3.72	□□□□□ -1.81
PMS1	YNL082W	LCP5	P40079	357 aa	Predicted RBP	3.72	□□□□□ -1.81
PMS1	YNL082W	RET3	P53600	189 aa		3.72	□□□□□ -1.81
PMS1	YNL082W	CFT1	Q06632	1357 aa	Known RBP	3.72	□□□□□ -1.81
PMS1	YNL082W	HEM2	P05373	342 aa		3.72	□□□□□ -1.81
PMS1	YNL082W	PRP16	P15938	1071 aa	Predicted RBP	3.72	□□□□□ -1.81
PMS1	YNL082W	HXT2	P23585	541 aa		3.72	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms