RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W UAF30Q08747 228 aa1.96□□□□□ -2.1
SEC22YLR268W SPE3Q12074 293 aaKnown RBP1.96□□□□□ -2.1
SEC22YLR268W PRB1P09232 635 aa1.95□□□□□ -2.1
SEC22YLR268W ARO3P14843 370 aaKnown RBP1.95□□□□□ -2.1
SEC22YLR268W HSP104P31539 908 aaKnown RBP1.95□□□□□ -2.1
SEC22YLR268W RIM1P32445 135 aaKnown RBP1.95□□□□□ -2.1
SEC22YLR268W CYS4P32582 507 aaKnown RBP1.95□□□□□ -2.1
SEC22YLR268W MSG5P38590 489 aa1.95□□□□□ -2.1
SEC22YLR268W INM1P38710 295 aa1.95□□□□□ -2.1
SEC22YLR268W STN1P38960 494 aa1.95□□□□□ -2.1
SEC22YLR268W YER079WP40052 210 aaKnown RBP1.95□□□□□ -2.1
SEC22YLR268W YPS6P40583 537 aa1.95□□□□□ -2.1
SEC22YLR268W RHO5P53879 331 aaKnown RBP1.95□□□□□ -2.1
SEC22YLR268W BCH1Q05029 724 aa1.95□□□□□ -2.1
SEC22YLR268W YDR341CQ05506 607 aaKnown RBP1.95□□□□□ -2.1
SEC22YLR268W SNT309Q06091 175 aaPredicted RBP1.95□□□□□ -2.1
SEC22YLR268W FDH1Q08911 376 aa1.95□□□□□ -2.1
SEC22YLR268W TPT1Q12272 230 aaKnown RBP1.95□□□□□ -2.1
SEC22YLR268W CEX1Q12453 761 aa1.95□□□□□ -2.1
SEC22YLR268W PAR32Q12515 295 aaKnown RBP1.95□□□□□ -2.1
SEC22YLR268W CDC21P06785 304 aa1.94□□□□□ -2.1
SEC22YLR268W DST1P07273 309 aa1.94□□□□□ -2.1
SEC22YLR268W MNE1P24720 663 aa1.94□□□□□ -2.1
SEC22YLR268W YCL068CP25593 260 aa1.94□□□□□ -2.1
SEC22YLR268W POP5P28005 173 aa1.94□□□□□ -2.1
SEC22YLR268W NUP2P32499 720 aa1.94□□□□□ -2.1
SEC22YLR268W ATP3P38077 311 aaKnown RBP1.94□□□□□ -2.1
SEC22YLR268W CHK1P38147 527 aa1.94□□□□□ -2.1
SEC22YLR268W GDI1P39958 451 aaKnown RBP1.94□□□□□ -2.1
SEC22YLR268W MMF1P40185 145 aaKnown RBP1.94□□□□□ -2.1
SEC22YLR268W JLP2P40206 208 aa1.94□□□□□ -2.1
SEC22YLR268W JEM1P40358 645 aa1.94□□□□□ -2.1
SEC22YLR268W PIB2P53191 635 aa1.94□□□□□ -2.1
SEC22YLR268W STD1Q02794 444 aa1.94□□□□□ -2.1
SEC22YLR268W VHS1Q03785 461 aa1.94□□□□□ -2.1
SEC22YLR268W RPN5Q12250 445 aaKnown RBP1.94□□□□□ -2.1
SEC22YLR268W SNU66Q12420 587 aaPredicted RBP1.94□□□□□ -2.1
SEC22YLR268W NFT1P0CE68 1218 aa1.93□□□□□ -2.1
SEC22YLR268W RPS8AP0CX39 200 aaKnown RBP1.93□□□□□ -2.1
SEC22YLR268W RPS8BP0CX40 200 aaKnown RBP1.93□□□□□ -2.1
SEC22YLR268W ALG1P16661 449 aa1.93□□□□□ -2.1
SEC22YLR268W PHO91P27514 894 aa1.93□□□□□ -2.1
SEC22YLR268W MDL1P33310 695 aa1.93□□□□□ -2.1
SEC22YLR268W RRP1P35178 278 aaPredicted RBP1.93□□□□□ -2.1
SEC22YLR268W GPI16P38875 610 aa1.93□□□□□ -2.1
SEC22YLR268W SEC28P40509 296 aaKnown RBP1.93□□□□□ -2.1
SEC22YLR268W EFM4P40516 257 aa1.93□□□□□ -2.1
SEC22YLR268W DFG10P40526 253 aa1.93□□□□□ -2.1
SEC22YLR268W CHS6P40955 746 aa1.93□□□□□ -2.1
SEC22YLR268W ROG1P53118 685 aa1.93□□□□□ -2.1
SEC22YLR268W MTM1P53320 366 aa1.93□□□□□ -2.1
SEC22YLR268W YDR541CQ03049 344 aa1.93□□□□□ -2.1
SEC22YLR268W ERO1Q03103 563 aa1.93□□□□□ -2.1
SEC22YLR268W ECM11Q04110 302 aa1.93□□□□□ -2.1
SEC22YLR268W NDE2Q07500 545 aa1.93□□□□□ -2.1
SEC22YLR268W CUE5Q08412 411 aaKnown RBP1.93□□□□□ -2.1
SEC22YLR268W IES4Q08561 116 aa1.93□□□□□ -2.1
SEC22YLR268W RAX1Q08760 435 aa1.93□□□□□ -2.1
SEC22YLR268W YRM1Q12340 786 aa1.93□□□□□ -2.1
SEC22YLR268W CYC3P06182 269 aa1.92□□□□□ -2.1
SEC22YLR268W RPL1AP0CX43 217 aaKnown RBP1.92□□□□□ -2.1
SEC22YLR268W RPL1BP0CX44 217 aaKnown RBP1.92□□□□□ -2.1
SEC22YLR268W NAM2P11325 894 aa1.92□□□□□ -2.1
SEC22YLR268W KAR9P32526 644 aa1.92□□□□□ -2.1
SEC22YLR268W NRP1P32770 719 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
SEC22YLR268W COX13P32799 129 aa1.92□□□□□ -2.1
SEC22YLR268W SKN1P33336 771 aa1.92□□□□□ -2.1
SEC22YLR268W QDR3P38227 689 aa1.92□□□□□ -2.1
SEC22YLR268W STP2P38704 541 aa1.92□□□□□ -2.1
SEC22YLR268W COX14P39103 70 aa1.92□□□□□ -2.1
SEC22YLR268W YIL029CP40538 142 aa1.92□□□□□ -2.1
SEC22YLR268W PAC11P40960 533 aa1.92□□□□□ -2.1
SEC22YLR268W GAB1P41733 394 aa1.92□□□□□ -2.1
SEC22YLR268W TOS3P43637 560 aa1.92□□□□□ -2.1
SEC22YLR268W NUP116Q02630 1113 aa1.92□□□□□ -2.1
SEC22YLR268W RCF1Q03713 159 aa1.92□□□□□ -2.1
SEC22YLR268W NDL1Q06568 189 aa1.92□□□□□ -2.1
SEC22YLR268W NSE1Q07913 336 aa1.92□□□□□ -2.1
SEC22YLR268W YPQ1Q12010 308 aa1.92□□□□□ -2.1
SEC22YLR268W NCA2Q12374 616 aa1.92□□□□□ -2.1
SEC22YLR268W HSP82P02829 709 aaKnown RBP1.91□□□□□ -2.1
SEC22YLR268W SLM5P25345 492 aaKnown RBP1.91□□□□□ -2.1
SEC22YLR268W PUP2P32379 260 aa1.91□□□□□ -2.1
SEC22YLR268W SBE22P38814 852 aa1.91□□□□□ -2.1
SEC22YLR268W UTP18P40362 594 aaPredicted RBP1.91□□□□□ -2.1
SEC22YLR268W MDE1P47095 244 aa1.91□□□□□ -2.1
SEC22YLR268W YJR085CP47131 105 aaKnown RBP1.91□□□□□ -2.1
SEC22YLR268W RRP46P53256 223 aaPredicted RBP1.91□□□□□ -2.1
SEC22YLR268W ALF1P53904 254 aa1.91□□□□□ -2.1
SEC22YLR268W MTQ1P53944 314 aa1.91□□□□□ -2.1
SEC22YLR268W MEH1Q02205 184 aa1.91□□□□□ -2.1
SEC22YLR268W ADA2Q02336 434 aa1.91□□□□□ -2.1
SEC22YLR268W CCE1Q03702 353 aa1.91□□□□□ -2.1
SEC22YLR268W MDM36Q06820 579 aa1.91□□□□□ -2.1
SEC22YLR268W CCH1P50077 2039 aa1.91□□□□□ -2.1
SEC22YLR268W POM152P39685 1337 aa1.91□□□□□ -2.1
SEC22YLR268W ATP1P07251 545 aaKnown RBP1.9□□□□□ -2.11
SEC22YLR268W RRP7P25368 297 aaPredicted RBP1.9□□□□□ -2.11
SEC22YLR268W PHA2P32452 334 aa1.9□□□□□ -2.11
SEC22YLR268W YEF1P32622 495 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms