RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W SIM1P40472 476 aa3.69□□□□□ -1.82
CTK1YKL139W TES1P41903 349 aaKnown RBP3.69□□□□□ -1.82
CTK1YKL139W SSN8P47821 323 aa3.69□□□□□ -1.82
CTK1YKL139W YPR078CQ06813 372 aa3.69□□□□□ -1.82
CTK1YKL139W LDS2Q08218 356 aa3.69□□□□□ -1.82
CTK1YKL139W YPL199CQ08954 240 aa3.69□□□□□ -1.82
CTK1YKL139W TAD3Q9URQ3 322 aa3.69□□□□□ -1.82
CTK1YKL139W VPS63O13549 108 aa3.68□□□□□ -1.82
CTK1YKL139W CBP2P03874 630 aaPredicted RBP3.68□□□□□ -1.82
CTK1YKL139W ATP1P07251 545 aaKnown RBP3.68□□□□□ -1.82
CTK1YKL139W HXT2P23585 541 aa3.68□□□□□ -1.82
CTK1YKL139W DBR1P24309 405 aaKnown RBP3.68□□□□□ -1.82
CTK1YKL139W GRR1P24814 1151 aa3.68□□□□□ -1.82
CTK1YKL139W MSK1P32048 576 aa3.68□□□□□ -1.82
CTK1YKL139W HMX1P32339 317 aa3.68□□□□□ -1.82
CTK1YKL139W SSE1P32589 693 aaKnown RBP3.68□□□□□ -1.82
CTK1YKL139W COX13P32799 129 aa3.68□□□□□ -1.82
CTK1YKL139W MRPL40P36534 297 aa3.68□□□□□ -1.82
CTK1YKL139W ATP3P38077 311 aaKnown RBP3.68□□□□□ -1.82
CTK1YKL139W BZZ1P38822 633 aa3.68□□□□□ -1.82
CTK1YKL139W SSO2P39926 295 aa3.68□□□□□ -1.82
CTK1YKL139W YFR018CP43599 363 aa3.68□□□□□ -1.82
CTK1YKL139W RTT101P47050 842 aa3.68□□□□□ -1.82
CTK1YKL139W AZR1P50080 613 aa3.68□□□□□ -1.82
CTK1YKL139W ARP5P53946 755 aa3.68□□□□□ -1.82
CTK1YKL139W HCR1Q05775 265 aaKnown RBP3.68□□□□□ -1.82
CTK1YKL139W NCA2Q12374 616 aa3.68□□□□□ -1.82
CTK1YKL139W RAD61Q99359 647 aa3.68□□□□□ -1.82
CTK1YKL139W HEM2P05373 342 aa3.68□□□□□ -1.82
CTK1YKL139W TPK3P05986 398 aa3.68□□□□□ -1.82
CTK1YKL139W CDC37P06101 506 aaKnown RBP3.68□□□□□ -1.82
CTK1YKL139W RPL20AP0CX23 172 aaKnown RBP3.68□□□□□ -1.82
CTK1YKL139W RPL20BP0CX24 172 aaPredicted RBP3.68□□□□□ -1.82
CTK1YKL139W RNA1P11745 407 aaKnown RBP3.68□□□□□ -1.82
CTK1YKL139W SLY1P22213 666 aa3.68□□□□□ -1.82
CTK1YKL139W RIB7P33312 244 aa3.68□□□□□ -1.82
CTK1YKL139W LOS1P33418 1100 aaPredicted RBP3.68□□□□□ -1.82
CTK1YKL139W KKQ8P36004 724 aa3.68□□□□□ -1.82
CTK1YKL139W PMU1P36069 295 aa3.68□□□□□ -1.82
CTK1YKL139W SPG5P42933 373 aa3.68□□□□□ -1.82
CTK1YKL139W TOS3P43637 560 aa3.68□□□□□ -1.82
CTK1YKL139W RET3P53600 189 aa3.68□□□□□ -1.82
CTK1YKL139W MSC3Q05812 728 aa3.68□□□□□ -1.82
CTK1YKL139W STE23Q06010 1027 aa3.68□□□□□ -1.82
CTK1YKL139W AYT1Q12226 474 aa3.68□□□□□ -1.82
CTK1YKL139W GLE1Q12315 538 aa3.68□□□□□ -1.82
CTK1YKL139W PFK27Q12471 397 aaPredicted RBP3.68□□□□□ -1.82
CTK1YKL139W AIM45Q12480 344 aaKnown RBP3.68□□□□□ -1.82
CTK1YKL139W INO80P53115 1489 aa3.67□□□□□ -1.82
CTK1YKL139W RPL15AP05748 204 aaKnown RBP3.67□□□□□ -1.82
CTK1YKL139W RNR2P09938 399 aaKnown RBP3.67□□□□□ -1.82
CTK1YKL139W GCD2P12754 651 aaPredicted RBP3.67□□□□□ -1.82
CTK1YKL139W GAL3P13045 520 aa3.67□□□□□ -1.82
CTK1YKL139W CDC23P16522 626 aa3.67□□□□□ -1.82
CTK1YKL139W SEC1P30619 724 aaKnown RBP3.67□□□□□ -1.82
CTK1YKL139W ALP1P38971 573 aa3.67□□□□□ -1.82
CTK1YKL139W AIM20P40451 204 aa3.67□□□□□ -1.82
CTK1YKL139W RPR2P40571 144 aa3.67□□□□□ -1.82
CTK1YKL139W YGL114WP53134 725 aa3.67□□□□□ -1.82
CTK1YKL139W YNL146WP53906 100 aa3.67□□□□□ -1.82
CTK1YKL139W YPL068CQ02749 293 aa3.67□□□□□ -1.82
CTK1YKL139W AIM33Q04516 312 aa3.67□□□□□ -1.82
CTK1YKL139W ARR1Q06596 294 aa3.67□□□□□ -1.82
CTK1YKL139W TPT1Q12272 230 aaKnown RBP3.67□□□□□ -1.82
CTK1YKL139W RRP36Q12481 300 aaPredicted RBP3.67□□□□□ -1.82
CTK1YKL139W FSH3Q99369 266 aa3.67□□□□□ -1.82
CTK1YKL139W ATR1P13090 542 aa3.66□□□□□ -1.82
CTK1YKL139W PUT3P25502 979 aaPredicted RBP3.66□□□□□ -1.82
CTK1YKL139W TOA2P32774 122 aa3.66□□□□□ -1.82
CTK1YKL139W SKT5P34226 696 aa3.66□□□□□ -1.82
CTK1YKL139W RIB5P38145 238 aa3.66□□□□□ -1.82
CTK1YKL139W MNN9P39107 395 aaKnown RBP3.66□□□□□ -1.82
CTK1YKL139W YJL070CP40361 888 aa3.66□□□□□ -1.82
CTK1YKL139W SFH5P47008 294 aa3.66□□□□□ -1.82
CTK1YKL139W YGR117CP53270 476 aa3.66□□□□□ -1.82
CTK1YKL139W CAF40P53829 373 aa3.66□□□□□ -1.82
CTK1YKL139W SPR6Q01684 191 aa3.66□□□□□ -1.82
CTK1YKL139W CUR1Q06469 252 aa3.66□□□□□ -1.82
CTK1YKL139W SRL1Q08673 210 aa3.66□□□□□ -1.82
CTK1YKL139W SNX3Q08826 162 aaKnown RBP3.66□□□□□ -1.82
CTK1YKL139W SET6Q12529 373 aa3.66□□□□□ -1.82
CTK1YKL139W SPO24Q3E752 67 aa3.66□□□□□ -1.82
CTK1YKL139W PET18P25362 215 aa3.65□□□□□ -1.82
CTK1YKL139W TIF5P38431 405 aaKnown RBP3.65□□□□□ -1.82
CTK1YKL139W YHR122WP38829 231 aa3.65□□□□□ -1.82
CTK1YKL139W FAA2P39518 744 aa3.65□□□□□ -1.82
CTK1YKL139W LYS12P40495 371 aaKnown RBP3.65□□□□□ -1.82
CTK1YKL139W OST1P41543 476 aaKnown RBP3.65□□□□□ -1.82
CTK1YKL139W SAD1P43589 448 aa3.65□□□□□ -1.82
CTK1YKL139W YFR016CP43597 1233 aaKnown RBP3.65□□□□□ -1.82
CTK1YKL139W RRN9P53437 365 aa3.65□□□□□ -1.82
CTK1YKL139W YMR181CQ03231 154 aa3.65□□□□□ -1.82
CTK1YKL139W BCH1Q05029 724 aa3.65□□□□□ -1.82
CTK1YKL139W ERP1Q05359 219 aaKnown RBP3.65□□□□□ -1.82
CTK1YKL139W YLR297WQ05899 129 aa3.65□□□□□ -1.82
CTK1YKL139W DAP1Q12091 152 aa3.65□□□□□ -1.82
CTK1YKL139W YOP1Q12402 180 aa3.65□□□□□ -1.82
CTK1YKL139W RRP12Q12754 1228 aaKnown RBP3.65□□□□□ -1.82
CTK1YKL139W GAL7P08431 366 aa3.64□□□□□ -1.83
CTK1YKL139W RPS16AP0CX51 143 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms