RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A MDY2Q12285 212 aa2.77□□□□□ -1.97
SFT1YKL006C-A TFB5Q3E7C1 72 aaPredicted RBP2.77□□□□□ -1.97
SFT1YKL006C-A HIS4P00815 799 aaKnown RBP2.76□□□□□ -1.97
SFT1YKL006C-A TEF1P02994 458 aaKnown RBP2.76□□□□□ -1.97
SFT1YKL006C-A ARG4P04076 463 aaPredicted RBP2.76□□□□□ -1.97
SFT1YKL006C-A RPL6BP05739 176 aaKnown RBP2.76□□□□□ -1.97
SFT1YKL006C-A RPS8AP0CX39 200 aaKnown RBP2.76□□□□□ -1.97
SFT1YKL006C-A RPS8BP0CX40 200 aaKnown RBP2.76□□□□□ -1.97
SFT1YKL006C-A GEX1P25596 615 aa2.76□□□□□ -1.97
SFT1YKL006C-A HIR2P32480 875 aa2.76□□□□□ -1.97
SFT1YKL006C-A SRB2P34162 210 aa2.76□□□□□ -1.97
SFT1YKL006C-A MRPL10P36520 322 aa2.76□□□□□ -1.97
SFT1YKL006C-A ZTA1P38230 334 aaKnown RBP2.76□□□□□ -1.97
SFT1YKL006C-A PFF1P38244 976 aa2.76□□□□□ -1.97
SFT1YKL006C-A GDT1P38301 280 aaPredicted RBP2.76□□□□□ -1.97
SFT1YKL006C-A VHC1P38329 1120 aa2.76□□□□□ -1.97
SFT1YKL006C-A LYS1P38998 373 aaRIP-Chip data2.76□□□□□ -1.97not detected
SFT1YKL006C-A VHS2P40463 436 aa2.76□□□□□ -1.97
SFT1YKL006C-A YNL143CP53908 130 aa2.76□□□□□ -1.97
SFT1YKL006C-A OCA2P53949 197 aa2.76□□□□□ -1.97
SFT1YKL006C-A RPL6AQ02326 176 aaKnown RBP2.76□□□□□ -1.97
SFT1YKL006C-A YMR181CQ03231 154 aa2.76□□□□□ -1.97
SFT1YKL006C-A AEP3Q12089 606 aa2.76□□□□□ -1.97
SFT1YKL006C-A YLR278CQ05854 1341 aa2.75□□□□□ -1.97
SFT1YKL006C-A SOD1P00445 154 aaKnown RBP2.75□□□□□ -1.97
SFT1YKL006C-A GPH1P06738 902 aaKnown RBP2.75□□□□□ -1.97
SFT1YKL006C-A SRV2P17555 526 aaKnown RBP2.75□□□□□ -1.97
SFT1YKL006C-A KRE2P27809 442 aa2.75□□□□□ -1.97
SFT1YKL006C-A ITR1P30605 584 aa2.75□□□□□ -1.97
SFT1YKL006C-A PPQ1P32945 549 aa2.75□□□□□ -1.97
SFT1YKL006C-A UTH1P36135 365 aa2.75□□□□□ -1.97
SFT1YKL006C-A MMS4P38257 691 aa2.75□□□□□ -1.97
SFT1YKL006C-A MSG5P38590 489 aa2.75□□□□□ -1.97
SFT1YKL006C-A CCT2P39076 527 aaKnown RBP2.75□□□□□ -1.97
SFT1YKL006C-A EPL1P43572 832 aa2.75□□□□□ -1.97
SFT1YKL006C-A MTM1P53320 366 aa2.75□□□□□ -1.97
SFT1YKL006C-A LAP3Q01532 483 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
SFT1YKL006C-A HAL1Q01766 294 aa2.75□□□□□ -1.97
SFT1YKL006C-A RPN9Q04062 393 aaKnown RBP2.75□□□□□ -1.97
SFT1YKL006C-A YFH1Q07540 174 aa2.75□□□□□ -1.97
SFT1YKL006C-A DIS3Q08162 1001 aaKnown RBP2.75□□□□□ -1.97
SFT1YKL006C-A REX4Q08237 289 aa2.75□□□□□ -1.97
SFT1YKL006C-A RTC5Q12108 567 aaKnown RBP2.75□□□□□ -1.97
SFT1YKL006C-A MED2Q12124 431 aa2.75□□□□□ -1.97
SFT1YKL006C-A YDR061WQ12298 539 aa2.75□□□□□ -1.97
SFT1YKL006C-A MTR10Q99189 972 aa2.75□□□□□ -1.97
SFT1YKL006C-A COX3P00420 269 aa2.74□□□□□ -1.97
SFT1YKL006C-A TRP1P00912 224 aa2.74□□□□□ -1.97
SFT1YKL006C-A RIP1P08067 215 aa2.74□□□□□ -1.97
SFT1YKL006C-A NFT1P0CE68 1218 aa2.74□□□□□ -1.97
SFT1YKL006C-A DBP3P20447 523 aaKnown RBP2.74□□□□□ -1.97
SFT1YKL006C-A UBA1P22515 1024 aaKnown RBP2.74□□□□□ -1.97
SFT1YKL006C-A PCL1P24867 279 aa2.74□□□□□ -1.97
SFT1YKL006C-A DAL80P26343 269 aa2.74□□□□□ -1.97
SFT1YKL006C-A BEM1P29366 551 aa2.74□□□□□ -1.97
SFT1YKL006C-A NIP1P32497 812 aaKnown RBP2.74□□□□□ -1.97
SFT1YKL006C-A MUD1P32605 298 aaKnown RBP2.74□□□□□ -1.97
SFT1YKL006C-A YDR089WP38966 869 aa2.74□□□□□ -1.97
SFT1YKL006C-A YNR048WP53740 393 aa2.74□□□□□ -1.97
SFT1YKL006C-A AQR1P53943 586 aa2.74□□□□□ -1.97
SFT1YKL006C-A UTP6Q02354 440 aaKnown RBP2.74□□□□□ -1.97
SFT1YKL006C-A RSN1Q03516 953 aa2.74□□□□□ -1.97
SFT1YKL006C-A SFG1Q12507 346 aa2.74□□□□□ -1.97
SFT1YKL006C-A NBL1Q3E7Y6 73 aa2.74□□□□□ -1.97
SFT1YKL006C-A SEC63P14906 663 aa2.73□□□□□ -1.97
SFT1YKL006C-A TAL1P15019 335 aaKnown RBP2.73□□□□□ -1.97
SFT1YKL006C-A PHO91P27514 894 aa2.73□□□□□ -1.97
SFT1YKL006C-A FAA1P30624 700 aaKnown RBP2.73□□□□□ -1.97
SFT1YKL006C-A KKQ8P36004 724 aa2.73□□□□□ -1.97
SFT1YKL006C-A YIL089WP40500 205 aa2.73□□□□□ -1.97
SFT1YKL006C-A SAS2P40963 338 aa2.73□□□□□ -1.97
SFT1YKL006C-A EFM3P47163 339 aa2.73□□□□□ -1.97
SFT1YKL006C-A HMS2P47175 358 aa2.73□□□□□ -1.97
SFT1YKL006C-A TIM11P81449 96 aaPredicted RBP2.73□□□□□ -1.97
SFT1YKL006C-A ABZ2Q03266 374 aa2.73□□□□□ -1.97
SFT1YKL006C-A BET5Q03630 159 aa2.73□□□□□ -1.97
SFT1YKL006C-A MDM30Q05930 598 aa2.73□□□□□ -1.97
SFT1YKL006C-A NDL1Q06568 189 aa2.73□□□□□ -1.97
SFT1YKL006C-A RKM1Q08961 583 aaPredicted RBP2.73□□□□□ -1.97
SFT1YKL006C-A PDE2P06776 526 aa2.72□□□□□ -1.97
SFT1YKL006C-A SCH9P11792 824 aaKnown RBP2.72□□□□□ -1.97
SFT1YKL006C-A GRR1P24814 1151 aa2.72□□□□□ -1.97
SFT1YKL006C-A SIN4P32259 974 aa2.72□□□□□ -1.97
SFT1YKL006C-A SSE1P32589 693 aaKnown RBP2.72□□□□□ -1.97
SFT1YKL006C-A MRPL40P36534 297 aa2.72□□□□□ -1.97
SFT1YKL006C-A ASC1P38011 319 aaKnown RBP2.72□□□□□ -1.97
SFT1YKL006C-A YHR131CP38835 850 aa2.72□□□□□ -1.97
SFT1YKL006C-A AIP1P46680 615 aaKnown RBP2.72□□□□□ -1.97
SFT1YKL006C-A GRX3Q03835 250 aa2.72□□□□□ -1.97
SFT1YKL006C-A IRC25Q07951 179 aa2.72□□□□□ -1.97
SFT1YKL006C-A ORT1Q12375 292 aa2.72□□□□□ -1.97
SFT1YKL006C-A SCEIP03882 235 aa2.71□□□□□ -1.98
SFT1YKL006C-A ILV5P06168 395 aaKnown RBP2.71□□□□□ -1.98
SFT1YKL006C-A STE3P06783 470 aa2.71□□□□□ -1.98
SFT1YKL006C-A OM45P16547 393 aa2.71□□□□□ -1.98
SFT1YKL006C-A RHB1P25378 209 aa2.71□□□□□ -1.98
SFT1YKL006C-A POP5P28005 173 aa2.71□□□□□ -1.98
SFT1YKL006C-A YBR137WP38276 179 aa2.71□□□□□ -1.98
SFT1YKL006C-A RFC3P38629 340 aa2.71□□□□□ -1.98
SFT1YKL006C-A GPI16P38875 610 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms