RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W TRM44Q02648 567 aaKnown RBP3.53□□□□□ -1.84
SPT6YGR116W AIM32Q04689 311 aa3.53□□□□□ -1.84
SPT6YGR116W SPO77Q06134 477 aa3.53□□□□□ -1.84
SPT6YGR116W YLR352WQ06479 807 aa3.53□□□□□ -1.84
SPT6YGR116W DDC1Q08949 612 aa3.53□□□□□ -1.84
SPT6YGR116W YLR108CQ12259 485 aa3.53□□□□□ -1.84
SPT6YGR116W AFI1Q99222 893 aa3.53□□□□□ -1.84
SPT6YGR116W GAL1P04385 528 aa3.53□□□□□ -1.84
SPT6YGR116W CBP1P07252 654 aa3.53□□□□□ -1.84
SPT6YGR116W YDJ1P25491 409 aaKnown RBP3.53□□□□□ -1.84
SPT6YGR116W YIH1P25637 258 aa3.53□□□□□ -1.84
SPT6YGR116W LDS1P31379 325 aa3.53□□□□□ -1.84
SPT6YGR116W IXR1P33417 597 aa3.53□□□□□ -1.84
SPT6YGR116W MKS1P34072 584 aa3.53□□□□□ -1.84
SPT6YGR116W PCS60P38137 543 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
SPT6YGR116W ERT1P38140 529 aa3.53□□□□□ -1.84
SPT6YGR116W IST3P40565 148 aaPredicted RBP3.53□□□□□ -1.84
SPT6YGR116W IDP2P41939 412 aa3.53□□□□□ -1.84
SPT6YGR116W RMD8P43620 662 aa3.53□□□□□ -1.84
SPT6YGR116W ASI3P53983 676 aa3.53□□□□□ -1.84
SPT6YGR116W NUP100Q02629 959 aa3.53□□□□□ -1.84
SPT6YGR116W YDR541CQ03049 344 aa3.53□□□□□ -1.84
SPT6YGR116W GAS2Q06135 555 aa3.53□□□□□ -1.84
SPT6YGR116W DIN7Q12086 430 aa3.53□□□□□ -1.84
SPT6YGR116W ERP3Q12403 225 aa3.53□□□□□ -1.84
SPT6YGR116W MRX4Q12467 430 aa3.53□□□□□ -1.84
SPT6YGR116W YKL018C-AQ3E7A7 99 aa3.53□□□□□ -1.84
SPT6YGR116W YCL012CQ8J0M4 134 aa3.53□□□□□ -1.84
SPT6YGR116W PHO80P20052 293 aa3.52□□□□□ -1.85
SPT6YGR116W AHC2P25649 128 aa3.52□□□□□ -1.85
SPT6YGR116W GUT2P32191 649 aa3.52□□□□□ -1.85
SPT6YGR116W SIP1P32578 815 aa3.52□□□□□ -1.85
SPT6YGR116W YKR051WP36142 418 aa3.52□□□□□ -1.85
SPT6YGR116W AGP2P38090 596 aa3.52□□□□□ -1.85
SPT6YGR116W LAG1P38703 411 aa3.52□□□□□ -1.85
SPT6YGR116W AIM46P38885 310 aa3.52□□□□□ -1.85
SPT6YGR116W RAD55P38953 406 aa3.52□□□□□ -1.85
SPT6YGR116W VAC8P39968 578 aa3.52□□□□□ -1.85
SPT6YGR116W PRE6P40303 254 aaKnown RBP3.52□□□□□ -1.85
SPT6YGR116W BAP3P41815 604 aa3.52□□□□□ -1.85
SPT6YGR116W BNA6P43619 295 aa3.52□□□□□ -1.85
SPT6YGR116W DLD2P46681 530 aaKnown RBP3.52□□□□□ -1.85
SPT6YGR116W NET1P47035 1189 aa3.52□□□□□ -1.85
SPT6YGR116W YNL018CP53976 612 aa3.52□□□□□ -1.85
SPT6YGR116W YSA1Q01976 231 aa3.52□□□□□ -1.85
SPT6YGR116W KAP120Q02932 1032 aa3.52□□□□□ -1.85
SPT6YGR116W NUT2Q06213 157 aa3.52□□□□□ -1.85
SPT6YGR116W RCL1Q08096 367 aaPredicted RBP3.52□□□□□ -1.85
SPT6YGR116W YTM1Q12024 460 aaPredicted RBP3.52□□□□□ -1.85
SPT6YGR116W NMD4Q12129 218 aa3.52□□□□□ -1.85
SPT6YGR116W TDH1P00360 332 aaKnown RBP3.52□□□□□ -1.85
SPT6YGR116W COX5AP00424 153 aa3.52□□□□□ -1.85
SPT6YGR116W SIR2P06700 562 aa3.52□□□□□ -1.85
SPT6YGR116W RDS2P19541 446 aaKnown RBP3.52□□□□□ -1.85
SPT6YGR116W VPH1P32563 840 aaKnown RBP3.52□□□□□ -1.85
SPT6YGR116W ARC19P33204 171 aaKnown RBP3.52□□□□□ -1.85
SPT6YGR116W TMA19P35691 167 aaKnown RBP3.52□□□□□ -1.85
SPT6YGR116W ADD66P36040 267 aa3.52□□□□□ -1.85
SPT6YGR116W OSH7P38755 437 aa3.52□□□□□ -1.85
SPT6YGR116W CTF8P38877 133 aa3.52□□□□□ -1.85
SPT6YGR116W FMC1P40491 155 aa3.52□□□□□ -1.85
SPT6YGR116W YFL052WP43551 465 aa3.52□□□□□ -1.85
SPT6YGR116W AAD10P47182 288 aa3.52□□□□□ -1.85
SPT6YGR116W COS10P52924 374 aa3.52□□□□□ -1.85
SPT6YGR116W VOA1P53262 265 aa3.52□□□□□ -1.85
SPT6YGR116W EMI1Q04406 187 aa3.52□□□□□ -1.85
SPT6YGR116W VID22Q05934 901 aa3.52□□□□□ -1.85
SPT6YGR116W CDD1Q06549 142 aa3.52□□□□□ -1.85
SPT6YGR116W ENV7Q12003 364 aa3.52□□□□□ -1.85
SPT6YGR116W MRH1Q12117 320 aaPredicted RBP3.52□□□□□ -1.85
SPT6YGR116W PKH2Q12236 1081 aaKnown RBP3.52□□□□□ -1.85
SPT6YGR116W YGL194C-AQ2V2P6 80 aa3.52□□□□□ -1.85
SPT6YGR116W MOT1P32333 1867 aa3.52□□□□□ -1.85
SPT6YGR116W GCD1P09032 578 aaPredicted RBP3.52□□□□□ -1.85
SPT6YGR116W BAR1P12630 587 aa3.52□□□□□ -1.85
SPT6YGR116W CDC23P16522 626 aa3.52□□□□□ -1.85
SPT6YGR116W RNA14P25298 677 aaKnown RBP3.52□□□□□ -1.85
SPT6YGR116W HCM1P25364 564 aa3.52□□□□□ -1.85
SPT6YGR116W RAD27P26793 382 aa3.52□□□□□ -1.85
SPT6YGR116W COQ2P32378 372 aa3.52□□□□□ -1.85
SPT6YGR116W SEC17P32602 292 aa3.52□□□□□ -1.85
SPT6YGR116W PMT1P33775 817 aa3.52□□□□□ -1.85
SPT6YGR116W LOT5P34234 306 aa3.52□□□□□ -1.85
SPT6YGR116W YBR053CP38235 358 aa3.52□□□□□ -1.85
SPT6YGR116W BMT2P38278 337 aa3.52□□□□□ -1.85
SPT6YGR116W OCA5P38738 679 aa3.52□□□□□ -1.85
SPT6YGR116W GEP4P38812 185 aa3.52□□□□□ -1.85
SPT6YGR116W EDC3P39998 551 aaKnown RBP3.52□□□□□ -1.85
SPT6YGR116W TIM13P53299 105 aa3.52□□□□□ -1.85
SPT6YGR116W YNL260CP53846 198 aa3.52□□□□□ -1.85
SPT6YGR116W CDC7P06243 507 aa3.51□□□□□ -1.85
SPT6YGR116W SPT3P06844 337 aa3.51□□□□□ -1.85
SPT6YGR116W ARO3P14843 370 aaKnown RBP3.51□□□□□ -1.85
SPT6YGR116W NDC1P32500 655 aa3.51□□□□□ -1.85
SPT6YGR116W UIP5P36137 443 aa3.51□□□□□ -1.85
SPT6YGR116W YBR238CP38330 731 aaKnown RBP3.51□□□□□ -1.85
SPT6YGR116W YHR033WP38690 423 aa3.51□□□□□ -1.85
SPT6YGR116W ALP1P38971 573 aa3.51□□□□□ -1.85
SPT6YGR116W MPM1P40364 252 aa3.51□□□□□ -1.85
SPT6YGR116W ROG1P53118 685 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms