RNA–Protein interactions for RNA: YGR038C-A

YGR038C-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR038C-A, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR038C-AYGR038C-A RRB1Q04225 511 aaKnown RBP4.15□□□□□ -1.75
YGR038C-AYGR038C-A YPL199CQ08954 240 aa4.15□□□□□ -1.75
YGR038C-AYGR038C-A TPT1Q12272 230 aaKnown RBP4.15□□□□□ -1.75
YGR038C-AYGR038C-A RRP12Q12754 1228 aaKnown RBP4.15□□□□□ -1.75
YGR038C-AYGR038C-A RNA1P11745 407 aaKnown RBP4.14□□□□□ -1.75
YGR038C-AYGR038C-A THR4P16120 514 aaKnown RBP4.14□□□□□ -1.75
YGR038C-AYGR038C-A PTK1P36002 662 aaPredicted RBP4.14□□□□□ -1.75
YGR038C-AYGR038C-A KKQ8P36004 724 aa4.14□□□□□ -1.75
YGR038C-AYGR038C-A YDR089WP38966 869 aa4.14□□□□□ -1.75
YGR038C-AYGR038C-A MMF1P40185 145 aaKnown RBP4.14□□□□□ -1.75
YGR038C-AYGR038C-A OSW5P40219 148 aa4.14□□□□□ -1.75
YGR038C-AYGR038C-A MEP1P40260 492 aa4.14□□□□□ -1.75
YGR038C-AYGR038C-A AZR1P50080 613 aa4.14□□□□□ -1.75
YGR038C-AYGR038C-A RRN9P53437 365 aa4.14□□□□□ -1.75
YGR038C-AYGR038C-A COS1P53822 381 aa4.14□□□□□ -1.75
YGR038C-AYGR038C-A PRM1P53835 661 aa4.14□□□□□ -1.75
YGR038C-AYGR038C-A HXT11P54862 567 aa4.14□□□□□ -1.75
YGR038C-AYGR038C-A YML122CQ03207 126 aa4.14□□□□□ -1.75
YGR038C-AYGR038C-A VPS20Q04272 221 aa4.14□□□□□ -1.75
YGR038C-AYGR038C-A RTC5Q12108 567 aaKnown RBP4.14□□□□□ -1.75
YGR038C-AYGR038C-A SET6Q12529 373 aa4.14□□□□□ -1.75
YGR038C-AYGR038C-A MCK1P21965 375 aaKnown RBP4.13□□□□□ -1.75
YGR038C-AYGR038C-A YBR056WP38081 501 aa4.13□□□□□ -1.75
YGR038C-AYGR038C-A YHR122WP38829 231 aa4.13□□□□□ -1.75
YGR038C-AYGR038C-A SPG5P42933 373 aa4.13□□□□□ -1.75
YGR038C-AYGR038C-A TOS3P43637 560 aa4.13□□□□□ -1.75
YGR038C-AYGR038C-A SFH5P47008 294 aa4.13□□□□□ -1.75
YGR038C-AYGR038C-A YDL186WP48568 277 aa4.13□□□□□ -1.75
YGR038C-AYGR038C-A RET3P53600 189 aa4.13□□□□□ -1.75
YGR038C-AYGR038C-A SMA2Q04658 369 aa4.13□□□□□ -1.75
YGR038C-AYGR038C-A BCH1Q05029 724 aa4.13□□□□□ -1.75
YGR038C-AYGR038C-A PEX27Q08580 376 aa4.13□□□□□ -1.75
YGR038C-AYGR038C-A THP3Q12049 470 aaKnown RBP4.13□□□□□ -1.75
YGR038C-AYGR038C-A ARF1P11076 181 aaKnown RBP4.12□□□□□ -1.75
YGR038C-AYGR038C-A SLY1P22213 666 aa4.12□□□□□ -1.75
YGR038C-AYGR038C-A SLM5P25345 492 aaKnown RBP4.12□□□□□ -1.75
YGR038C-AYGR038C-A YBL028CP38202 106 aa4.12□□□□□ -1.75
YGR038C-AYGR038C-A LCP5P40079 357 aaPredicted RBP4.12□□□□□ -1.75
YGR038C-AYGR038C-A OST1P41543 476 aaKnown RBP4.12□□□□□ -1.75
YGR038C-AYGR038C-A HST1P53685 503 aa4.12□□□□□ -1.75
YGR038C-AYGR038C-A ASA1Q06822 443 aa4.12□□□□□ -1.75
YGR038C-AYGR038C-A NCA2Q12374 616 aa4.12□□□□□ -1.75
YGR038C-AYGR038C-A AIM45Q12480 344 aaKnown RBP4.12□□□□□ -1.75
YGR038C-AYGR038C-A RPS16AP0CX51 143 aaKnown RBP4.11□□□□□ -1.75
YGR038C-AYGR038C-A RPS16BP0CX52 143 aaKnown RBP4.11□□□□□ -1.75
YGR038C-AYGR038C-A GRR1P24814 1151 aa4.11□□□□□ -1.75
YGR038C-AYGR038C-A SPT10P35208 640 aa4.11□□□□□ -1.75
YGR038C-AYGR038C-A YBR139WP38109 508 aa4.11□□□□□ -1.75
YGR038C-AYGR038C-A RIB5P38145 238 aa4.11□□□□□ -1.75
YGR038C-AYGR038C-A SAD1P43589 448 aa4.11□□□□□ -1.75
YGR038C-AYGR038C-A YGR117CP53270 476 aa4.11□□□□□ -1.75
YGR038C-AYGR038C-A LSC1P53598 329 aaKnown RBP4.11□□□□□ -1.75
YGR038C-AYGR038C-A IBD2P53892 351 aa4.11□□□□□ -1.75
YGR038C-AYGR038C-A STE23Q06010 1027 aa4.11□□□□□ -1.75
YGR038C-AYGR038C-A LDS2Q08218 356 aa4.11□□□□□ -1.75
YGR038C-AYGR038C-A RAX1Q08760 435 aa4.11□□□□□ -1.75
YGR038C-AYGR038C-A AFT2Q08957 416 aa4.11□□□□□ -1.75
YGR038C-AYGR038C-A MDY2Q12285 212 aa4.11□□□□□ -1.75
YGR038C-AYGR038C-A PAB1P04147 577 aaKnown RBP RIP-Chip data4.1□□□□□ -1.75not detected
YGR038C-AYGR038C-A ATP1P07251 545 aaKnown RBP4.1□□□□□ -1.75
YGR038C-AYGR038C-A SSC1P0CS90 654 aaKnown RBP4.1□□□□□ -1.75
YGR038C-AYGR038C-A EXG1P23776 448 aaKnown RBP4.1□□□□□ -1.75
YGR038C-AYGR038C-A SPS22P25380 463 aa4.1□□□□□ -1.75
YGR038C-AYGR038C-A YCL068CP25593 260 aa4.1□□□□□ -1.75
YGR038C-AYGR038C-A DOA1P36037 715 aa4.1□□□□□ -1.75
YGR038C-AYGR038C-A ATP3P38077 311 aaKnown RBP4.1□□□□□ -1.75
YGR038C-AYGR038C-A PCL7P40186 285 aa4.1□□□□□ -1.75
YGR038C-AYGR038C-A JLP2P40206 208 aa4.1□□□□□ -1.75
YGR038C-AYGR038C-A ATM1P40416 690 aa4.1□□□□□ -1.75
YGR038C-AYGR038C-A MKT1P40850 830 aaKnown RBP4.1□□□□□ -1.75
YGR038C-AYGR038C-A YJL213WP40896 331 aa4.1□□□□□ -1.75
YGR038C-AYGR038C-A ABM1P47146 123 aa4.1□□□□□ -1.75
YGR038C-AYGR038C-A MSO1P53604 210 aaKnown RBP4.1□□□□□ -1.75
YGR038C-AYGR038C-A WSC2P53832 503 aa4.1□□□□□ -1.75
YGR038C-AYGR038C-A ERV25P54837 211 aaKnown RBP4.1□□□□□ -1.75
YGR038C-AYGR038C-A ABZ2Q03266 374 aa4.1□□□□□ -1.75
YGR038C-AYGR038C-A MSC3Q05812 728 aa4.1□□□□□ -1.75
YGR038C-AYGR038C-A SNX3Q08826 162 aaKnown RBP4.1□□□□□ -1.75
YGR038C-AYGR038C-A CAP2P13517 287 aa4.09□□□□□ -1.75
YGR038C-AYGR038C-A DBP3P20447 523 aaKnown RBP4.09□□□□□ -1.75
YGR038C-AYGR038C-A DBR1P24309 405 aaKnown RBP4.09□□□□□ -1.75
YGR038C-AYGR038C-A MSK1P32048 576 aa4.09□□□□□ -1.75
YGR038C-AYGR038C-A YEF1P32622 495 aa4.09□□□□□ -1.75
YGR038C-AYGR038C-A TMT1P32643 299 aa4.09□□□□□ -1.75
YGR038C-AYGR038C-A SKT5P34226 696 aa4.09□□□□□ -1.75
YGR038C-AYGR038C-A NAT2P37293 288 aa4.09□□□□□ -1.75
YGR038C-AYGR038C-A YBP1P38315 674 aa4.09□□□□□ -1.75
YGR038C-AYGR038C-A MDM31P38880 579 aa4.09□□□□□ -1.75
YGR038C-AYGR038C-A GRS2Q06817 618 aa4.09□□□□□ -1.75
YGR038C-AYGR038C-A YOP1Q12402 180 aa4.09□□□□□ -1.75
YGR038C-AYGR038C-A CEX1Q12453 761 aa4.09□□□□□ -1.75
YGR038C-AYGR038C-A CBP2P03874 630 aaPredicted RBP4.08□□□□□ -1.76
YGR038C-AYGR038C-A TPK3P05986 398 aa4.08□□□□□ -1.76
YGR038C-AYGR038C-A GDH1P07262 454 aaKnown RBP4.08□□□□□ -1.76
YGR038C-AYGR038C-A MAS1P10507 462 aa4.08□□□□□ -1.76
YGR038C-AYGR038C-A MAS2P11914 482 aa4.08□□□□□ -1.76
YGR038C-AYGR038C-A PHA2P32452 334 aa4.08□□□□□ -1.76
YGR038C-AYGR038C-A MRP4P32902 394 aa4.08□□□□□ -1.76
YGR038C-AYGR038C-A MCR1P36060 302 aaKnown RBP4.08□□□□□ -1.76
YGR038C-AYGR038C-A CHK1P38147 527 aa4.08□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms