RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W ZWF1P11412 505 aaKnown RBP5.13□□□□□ -1.59
SHE10YGL228W GRR1P24814 1151 aa5.13□□□□□ -1.59
SHE10YGL228W RER1P25560 188 aa5.13□□□□□ -1.59
SHE10YGL228W IMG1P25626 169 aa5.13□□□□□ -1.59
SHE10YGL228W SSH4P32343 579 aa5.13□□□□□ -1.59
SHE10YGL228W SAC1P32368 623 aaKnown RBP5.13□□□□□ -1.59
SHE10YGL228W CYS4P32582 507 aaKnown RBP5.13□□□□□ -1.59
SHE10YGL228W FMP52P40008 231 aa5.13□□□□□ -1.59
SHE10YGL228W THO1P40040 218 aaKnown RBP5.13□□□□□ -1.59
SHE10YGL228W CAK1P43568 368 aaPredicted RBP5.13□□□□□ -1.59
SHE10YGL228W VMA10P48836 114 aaKnown RBP5.13□□□□□ -1.59
SHE10YGL228W UBC9P50623 157 aaPredicted RBP5.13□□□□□ -1.59
SHE10YGL228W YMR226CQ05016 267 aaKnown RBP5.13□□□□□ -1.59
SHE10YGL228W NDL1Q06568 189 aa5.13□□□□□ -1.59
SHE10YGL228W YOL036WQ08206 761 aa5.13□□□□□ -1.59
SHE10YGL228W VIK1Q12045 647 aa5.13□□□□□ -1.59
SHE10YGL228W PIN2Q12057 282 aa5.13□□□□□ -1.59
SHE10YGL228W GLT1Q12680 2145 aaKnown RBP5.13□□□□□ -1.59
SHE10YGL228W RPB5P20434 215 aa5.12□□□□□ -1.59
SHE10YGL228W AHP1P38013 176 aaKnown RBP5.12□□□□□ -1.59
SHE10YGL228W YRO2P38079 344 aa5.12□□□□□ -1.59
SHE10YGL228W YBR238CP38330 731 aaKnown RBP5.12□□□□□ -1.59
SHE10YGL228W PDS1P40316 373 aaPredicted RBP5.12□□□□□ -1.59
SHE10YGL228W YJL068CP40363 299 aa5.12□□□□□ -1.59
SHE10YGL228W MPH1P40562 993 aa5.12□□□□□ -1.59
SHE10YGL228W YGR201CP42936 225 aa5.12□□□□□ -1.59
SHE10YGL228W SYF2P53277 215 aaPredicted RBP5.12□□□□□ -1.59
SHE10YGL228W RRN5Q02983 363 aa5.12□□□□□ -1.59
SHE10YGL228W RSC9Q03124 581 aa5.12□□□□□ -1.59
SHE10YGL228W DIC1Q06143 298 aa5.12□□□□□ -1.59
SHE10YGL228W YLR456WQ06199 204 aa5.12□□□□□ -1.59
SHE10YGL228W RSA1Q08932 381 aa5.12□□□□□ -1.59
SHE10YGL228W YLR126CQ12288 251 aa5.12□□□□□ -1.59
SHE10YGL228W AIR2Q12476 344 aaKnown RBP5.12□□□□□ -1.59
SHE10YGL228W TSC13Q99190 310 aa5.12□□□□□ -1.59
SHE10YGL228W SIR3P06701 978 aa5.11□□□□□ -1.59
SHE10YGL228W GPH1P06738 902 aaKnown RBP5.11□□□□□ -1.59
SHE10YGL228W CDC4P07834 779 aa5.11□□□□□ -1.59
SHE10YGL228W YCK1P23291 538 aa5.11□□□□□ -1.59
SHE10YGL228W RPN2P32565 945 aaKnown RBP5.11□□□□□ -1.59
SHE10YGL228W HCS1P34243 683 aa5.11□□□□□ -1.59
SHE10YGL228W RPS27AP35997 82 aaKnown RBP5.11□□□□□ -1.59
SHE10YGL228W YBR285WP38354 144 aa5.11□□□□□ -1.59
SHE10YGL228W RPS27BP38711 82 aa5.11□□□□□ -1.59
SHE10YGL228W BIG1P38813 335 aa5.11□□□□□ -1.59
SHE10YGL228W YAR028WP39548 234 aa5.11□□□□□ -1.59
SHE10YGL228W PRP39P39682 629 aaKnown RBP5.11□□□□□ -1.59
SHE10YGL228W GIP2P40036 548 aa5.11□□□□□ -1.59
SHE10YGL228W YIL152WP40455 235 aa5.11□□□□□ -1.59
SHE10YGL228W YIL086CP40503 102 aa5.11□□□□□ -1.59
SHE10YGL228W TRM9P49957 279 aa5.11□□□□□ -1.59
SHE10YGL228W MON1P53129 644 aa5.11□□□□□ -1.59
SHE10YGL228W DAM1P53267 343 aa5.11□□□□□ -1.59
SHE10YGL228W MTQ1P53944 314 aa5.11□□□□□ -1.59
SHE10YGL228W RAD30Q04049 632 aa5.11□□□□□ -1.59
SHE10YGL228W YTM1Q12024 460 aaPredicted RBP5.11□□□□□ -1.59
SHE10YGL228W NKP1Q12493 238 aa5.11□□□□□ -1.59
SHE10YGL228W YKL033W-AQ86ZR7 236 aa5.11□□□□□ -1.59
SHE10YGL228W URE2P23202 354 aaKnown RBP5.11□□□□□ -1.59
SHE10YGL228W RHB1P25378 209 aa5.11□□□□□ -1.59
SHE10YGL228W YJU2P28320 278 aaPredicted RBP5.11□□□□□ -1.59
SHE10YGL228W IDH1P28834 360 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
SHE10YGL228W MRPL6P32904 214 aa5.11□□□□□ -1.59
SHE10YGL228W MSN2P33748 704 aa5.11□□□□□ -1.59
SHE10YGL228W PET112P33893 541 aa5.11□□□□□ -1.59
SHE10YGL228W COG3P40094 801 aa5.11□□□□□ -1.59
SHE10YGL228W SPG5P42933 373 aa5.11□□□□□ -1.59
SHE10YGL228W FAR7P43592 221 aa5.11□□□□□ -1.59
SHE10YGL228W PRM8P53174 237 aa5.11□□□□□ -1.59
SHE10YGL228W ERG13P54839 491 aaKnown RBP5.11□□□□□ -1.59
SHE10YGL228W TPS1Q00764 495 aaKnown RBP5.11□□□□□ -1.59
SHE10YGL228W CTL1Q03220 320 aaKnown RBP5.11□□□□□ -1.59
SHE10YGL228W RIM13Q03792 727 aa5.11□□□□□ -1.59
SHE10YGL228W KRE28Q04431 385 aa5.11□□□□□ -1.59
SHE10YGL228W RSF1Q05043 376 aa5.11□□□□□ -1.59
SHE10YGL228W ATG38Q05789 226 aaKnown RBP5.11□□□□□ -1.59
SHE10YGL228W ARO10Q06408 635 aa5.11□□□□□ -1.59
SHE10YGL228W FDH1Q08911 376 aa5.11□□□□□ -1.59
SHE10YGL228W MRX4Q12467 430 aa5.11□□□□□ -1.59
SHE10YGL228W RPC40P07703 335 aaKnown RBP5.1□□□□□ -1.59
SHE10YGL228W SEC2P17065 759 aa5.1□□□□□ -1.59
SHE10YGL228W PET9P18239 318 aaKnown RBP5.1□□□□□ -1.59
SHE10YGL228W DBP3P20447 523 aaKnown RBP5.1□□□□□ -1.59
SHE10YGL228W MCK1P21965 375 aaKnown RBP5.1□□□□□ -1.59
SHE10YGL228W BCK2P33306 851 aa5.1□□□□□ -1.59
SHE10YGL228W TIF3P34167 436 aaKnown RBP5.1□□□□□ -1.59
SHE10YGL228W SPC42P36094 363 aa5.1□□□□□ -1.59
SHE10YGL228W ECM8P38246 354 aa5.1□□□□□ -1.59
SHE10YGL228W PZF1P39933 429 aa5.1□□□□□ -1.59
SHE10YGL228W TPA1P40032 644 aaKnown RBP5.1□□□□□ -1.59
SHE10YGL228W RIO2P40160 425 aaKnown RBP5.1□□□□□ -1.59
SHE10YGL228W PRE6P40303 254 aaKnown RBP5.1□□□□□ -1.59
SHE10YGL228W UTP25P40498 721 aaKnown RBP5.1□□□□□ -1.59
SHE10YGL228W GPI8P49018 411 aa5.1□□□□□ -1.59
SHE10YGL228W TPC1P53257 314 aa5.1□□□□□ -1.59
SHE10YGL228W NAM8Q00539 523 aaKnown RBP5.1□□□□□ -1.59
SHE10YGL228W ELP4Q02884 456 aaKnown RBP5.1□□□□□ -1.59
SHE10YGL228W SIZ1Q04195 904 aa5.1□□□□□ -1.59
SHE10YGL228W NAT4Q04751 285 aa5.1□□□□□ -1.59
SHE10YGL228W YOR238WQ08634 303 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms