RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W RIC1P40395 1056 aa6.35□□□□□ -1.39
NUP49YGL172W LYS12P40495 371 aaKnown RBP6.35□□□□□ -1.39
NUP49YGL172W TED1P40533 473 aa6.35□□□□□ -1.39
NUP49YGL172W ARF3P40994 183 aaRIP-Chip data6.35□□□□□ -1.39not detected
NUP49YGL172W RPS0BP46654 252 aaKnown RBP6.35□□□□□ -1.39
NUP49YGL172W MON1P53129 644 aa6.35□□□□□ -1.39
NUP49YGL172W YNL165WP53891 406 aa6.35□□□□□ -1.39
NUP49YGL172W ERG13P54839 491 aaKnown RBP6.35□□□□□ -1.39
NUP49YGL172W RHO4Q00246 291 aa6.35□□□□□ -1.39
NUP49YGL172W SPC2Q04969 178 aa6.35□□□□□ -1.39
NUP49YGL172W MRL1Q06815 381 aa6.35□□□□□ -1.39
NUP49YGL172W PSR1Q07800 427 aa6.35□□□□□ -1.39
NUP49YGL172W NTG2Q08214 380 aa6.35□□□□□ -1.39
NUP49YGL172W GLE1Q12315 538 aa6.35□□□□□ -1.39
NUP49YGL172W YOR019WQ99248 730 aa6.35□□□□□ -1.39
NUP49YGL172W HFA1P32874 2273 aa6.35□□□□□ -1.39
NUP49YGL172W IRA1P18963 3092 aa6.34□□□□□ -1.39
NUP49YGL172W ARE1P25628 610 aa6.34□□□□□ -1.39
NUP49YGL172W TFC1P32367 649 aa6.34□□□□□ -1.39
NUP49YGL172W KAP122P32767 1081 aa6.34□□□□□ -1.39
NUP49YGL172W UBS1P38290 277 aa6.34□□□□□ -1.39
NUP49YGL172W MNN9P39107 395 aaKnown RBP6.34□□□□□ -1.39
NUP49YGL172W FAU1P40099 211 aa6.34□□□□□ -1.39
NUP49YGL172W YIL152WP40455 235 aa6.34□□□□□ -1.39
NUP49YGL172W NOP9P47077 666 aaKnown RBP6.34□□□□□ -1.39
NUP49YGL172W JHD2P47156 728 aaPredicted RBP6.34□□□□□ -1.39
NUP49YGL172W PMT3P47190 753 aa6.34□□□□□ -1.39
NUP49YGL172W PAC10P48363 199 aa6.34□□□□□ -1.39
NUP49YGL172W CDH1P53197 566 aa6.34□□□□□ -1.39
NUP49YGL172W YGR012WP53206 393 aa6.34□□□□□ -1.39
NUP49YGL172W TRS23Q03784 219 aa6.34□□□□□ -1.39
NUP49YGL172W TPP1Q03796 238 aa6.34□□□□□ -1.39
NUP49YGL172W MFG1Q07684 458 aa6.34□□□□□ -1.39
NUP49YGL172W YTM1Q12024 460 aaPredicted RBP6.34□□□□□ -1.39
NUP49YGL172W ULA1Q12059 462 aa6.34□□□□□ -1.39
NUP49YGL172W NSI1Q12457 570 aa6.34□□□□□ -1.39
NUP49YGL172W SKS1Q12505 502 aa6.34□□□□□ -1.39
NUP49YGL172W BRR2P32639 2163 aaKnown RBP6.34□□□□□ -1.4
NUP49YGL172W YCL049CP25577 312 aa6.33□□□□□ -1.4
NUP49YGL172W MLF3P32047 452 aa6.33□□□□□ -1.4
NUP49YGL172W SIN4P32259 974 aa6.33□□□□□ -1.4
NUP49YGL172W DPH5P32469 300 aaPredicted RBP6.33□□□□□ -1.4
NUP49YGL172W PDX3P38075 228 aaKnown RBP6.33□□□□□ -1.4
NUP49YGL172W YHR177WP38867 453 aa6.33□□□□□ -1.4
NUP49YGL172W YHR218WP38899 603 aa6.33□□□□□ -1.4
NUP49YGL172W DSS1P39112 969 aa6.33□□□□□ -1.4
NUP49YGL172W ECM10P39987 644 aa6.33□□□□□ -1.4
NUP49YGL172W ASK10P48361 1146 aa6.33□□□□□ -1.4
NUP49YGL172W ERP6P53198 216 aa6.33□□□□□ -1.4
NUP49YGL172W OAZ1Q02803 292 aa6.33□□□□□ -1.4
NUP49YGL172W SVL3Q03088 825 aaKnown RBP6.33□□□□□ -1.4
NUP49YGL172W GPN2Q08726 347 aaPredicted RBP6.33□□□□□ -1.4
NUP49YGL172W HTS1P07263 546 aaKnown RBP6.33□□□□□ -1.4
NUP49YGL172W RIP1P08067 215 aa6.33□□□□□ -1.4
NUP49YGL172W URA4P20051 364 aa6.33□□□□□ -1.4
NUP49YGL172W CMK1P27466 446 aaKnown RBP6.33□□□□□ -1.4
NUP49YGL172W PEX3P28795 441 aa6.33□□□□□ -1.4
NUP49YGL172W AIM46P38885 310 aa6.33□□□□□ -1.4
NUP49YGL172W HOS2P53096 452 aaPredicted RBP6.33□□□□□ -1.4
NUP49YGL172W ATP25Q03153 612 aa6.33□□□□□ -1.4
NUP49YGL172W UGO1Q03327 502 aa6.33□□□□□ -1.4
NUP49YGL172W ARR1Q06596 294 aa6.33□□□□□ -1.4
NUP49YGL172W YKL033W-AQ86ZR7 236 aa6.33□□□□□ -1.4
NUP49YGL172W SLH1P53327 1967 aaKnown RBP6.32□□□□□ -1.4
NUP49YGL172W RAD7P06779 565 aa6.32□□□□□ -1.4
NUP49YGL172W MER1P16523 270 aa6.32□□□□□ -1.4
NUP49YGL172W RPB5P20434 215 aa6.32□□□□□ -1.4
NUP49YGL172W APN1P22936 367 aa6.32□□□□□ -1.4
NUP49YGL172W SBA1P28707 216 aaKnown RBP6.32□□□□□ -1.4
NUP49YGL172W MKK1P32490 508 aa6.32□□□□□ -1.4
NUP49YGL172W PTR2P32901 601 aa6.32□□□□□ -1.4
NUP49YGL172W MSN2P33748 704 aa6.32□□□□□ -1.4
NUP49YGL172W ATG14P38270 344 aa6.32□□□□□ -1.4
NUP49YGL172W FAA2P39518 744 aa6.32□□□□□ -1.4
NUP49YGL172W DIM1P41819 318 aaKnown RBP6.32□□□□□ -1.4
NUP49YGL172W GNP1P48813 663 aa6.32□□□□□ -1.4
NUP49YGL172W TOM22P49334 152 aa6.32□□□□□ -1.4
NUP49YGL172W UBC9P50623 157 aaPredicted RBP6.32□□□□□ -1.4
NUP49YGL172W YGR016WP53209 190 aa6.32□□□□□ -1.4
NUP49YGL172W YMR310CQ04867 317 aaPredicted RBP6.32□□□□□ -1.4
NUP49YGL172W GPI11Q06636 219 aa6.32□□□□□ -1.4
NUP49YGL172W FDH1Q08911 376 aa6.32□□□□□ -1.4
NUP49YGL172W ZWF1P11412 505 aaKnown RBP6.31□□□□□ -1.4
NUP49YGL172W GAL3P13045 520 aa6.31□□□□□ -1.4
NUP49YGL172W FAA1P30624 700 aaKnown RBP6.31□□□□□ -1.4
NUP49YGL172W LHP1P33399 275 aaKnown RBP6.31□□□□□ -1.4
NUP49YGL172W SKG1P36169 355 aa6.31□□□□□ -1.4
NUP49YGL172W ZTA1P38230 334 aaKnown RBP6.31□□□□□ -1.4
NUP49YGL172W TRR2P38816 342 aa6.31□□□□□ -1.4
NUP49YGL172W YEL020CP39994 560 aa6.31□□□□□ -1.4
NUP49YGL172W GIP2P40036 548 aa6.31□□□□□ -1.4
NUP49YGL172W YER158CP40095 573 aa6.31□□□□□ -1.4
NUP49YGL172W YJL068CP40363 299 aa6.31□□□□□ -1.4
NUP49YGL172W UTP25P40498 721 aaKnown RBP6.31□□□□□ -1.4
NUP49YGL172W ICE2P40499 491 aa6.31□□□□□ -1.4
NUP49YGL172W YGR079WP53249 370 aa6.31□□□□□ -1.4
NUP49YGL172W SNP1Q00916 300 aaPredicted RBP6.31□□□□□ -1.4
NUP49YGL172W PEX12Q04370 399 aa6.31□□□□□ -1.4
NUP49YGL172W YPR174CQ06616 221 aaPredicted RBP6.31□□□□□ -1.4
NUP49YGL172W YEH1Q07804 573 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 213.7 ms