RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A PAC11P40960 533 aa2.93□□□□□ -1.94
YDR170W-AYDR170W-A EPL1P43572 832 aa2.93□□□□□ -1.94
YDR170W-AYDR170W-A ASN2P49090 572 aaKnown RBP2.93□□□□□ -1.94
YDR170W-AYDR170W-A RRP9Q06506 573 aaKnown RBP2.93□□□□□ -1.94
YDR170W-AYDR170W-A DST1P07273 309 aa2.93□□□□□ -1.94
YDR170W-AYDR170W-A DAP2P18962 818 aa2.93□□□□□ -1.94
YDR170W-AYDR170W-A PHO84P25297 587 aaKnown RBP2.93□□□□□ -1.94
YDR170W-AYDR170W-A POT1P27796 417 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
YDR170W-AYDR170W-A NRP1P32770 719 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
YDR170W-AYDR170W-A LAS1P36146 502 aaPredicted RBP2.93□□□□□ -1.94
YDR170W-AYDR170W-A QDR3P38227 689 aa2.93□□□□□ -1.94
YDR170W-AYDR170W-A STP2P38704 541 aa2.93□□□□□ -1.94
YDR170W-AYDR170W-A YER079WP40052 210 aaKnown RBP2.93□□□□□ -1.94
YDR170W-AYDR170W-A YGL242CP53066 181 aa2.93□□□□□ -1.94
YDR170W-AYDR170W-A ROG1P53118 685 aa2.93□□□□□ -1.94
YDR170W-AYDR170W-A STD1Q02794 444 aa2.93□□□□□ -1.94
YDR170W-AYDR170W-A CUE5Q08412 411 aaKnown RBP2.93□□□□□ -1.94
YDR170W-AYDR170W-A PGC1Q08959 321 aa2.93□□□□□ -1.94
YDR170W-AYDR170W-A TMS1Q12116 473 aa2.93□□□□□ -1.94
YDR170W-AYDR170W-A YDR061WQ12298 539 aa2.93□□□□□ -1.94
YDR170W-AYDR170W-A TFB5Q3E7C1 72 aaPredicted RBP2.93□□□□□ -1.94
YDR170W-AYDR170W-A SRN2Q99176 213 aa2.93□□□□□ -1.94
YDR170W-AYDR170W-A TRP1P00912 224 aa2.92□□□□□ -1.94
YDR170W-AYDR170W-A NFT1P0CE68 1218 aa2.92□□□□□ -1.94
YDR170W-AYDR170W-A KRR1P25586 316 aaPredicted RBP2.92□□□□□ -1.94
YDR170W-AYDR170W-A UIP5P36137 443 aa2.92□□□□□ -1.94
YDR170W-AYDR170W-A YBR056WP38081 501 aa2.92□□□□□ -1.94
YDR170W-AYDR170W-A ADH5P38113 351 aaKnown RBP2.92□□□□□ -1.94
YDR170W-AYDR170W-A CHS6P40955 746 aa2.92□□□□□ -1.94
YDR170W-AYDR170W-A ATP22P50273 684 aaPredicted RBP2.92□□□□□ -1.94
YDR170W-AYDR170W-A PRP3Q03338 469 aaPredicted RBP2.92□□□□□ -1.94
YDR170W-AYDR170W-A HER2Q03557 464 aa2.92□□□□□ -1.94
YDR170W-AYDR170W-A BCH1Q05029 724 aa2.92□□□□□ -1.94
YDR170W-AYDR170W-A YDR286CQ05530 114 aa2.92□□□□□ -1.94
YDR170W-AYDR170W-A IPK1Q06667 281 aa2.92□□□□□ -1.94
YDR170W-AYDR170W-A MRPL35Q06678 367 aa2.92□□□□□ -1.94
YDR170W-AYDR170W-A TPT1Q12272 230 aaKnown RBP2.92□□□□□ -1.94
YDR170W-AYDR170W-A ARO2P28777 376 aaKnown RBP2.91□□□□□ -1.94
YDR170W-AYDR170W-A FAA1P30624 700 aaKnown RBP2.91□□□□□ -1.94
YDR170W-AYDR170W-A YSC83P32792 385 aa2.91□□□□□ -1.94
YDR170W-AYDR170W-A SKN1P33336 771 aa2.91□□□□□ -1.94
YDR170W-AYDR170W-A ATP3P38077 311 aaKnown RBP2.91□□□□□ -1.94
YDR170W-AYDR170W-A KAP104P38217 918 aaKnown RBP2.91□□□□□ -1.94
YDR170W-AYDR170W-A SIF2P38262 535 aa2.91□□□□□ -1.94
YDR170W-AYDR170W-A REE1P40893 198 aa2.91□□□□□ -1.94
YDR170W-AYDR170W-A YGR210CP42942 411 aa2.91□□□□□ -1.94
YDR170W-AYDR170W-A SFH5P47008 294 aa2.91□□□□□ -1.94
YDR170W-AYDR170W-A YIP5P53108 310 aa2.91□□□□□ -1.94
YDR170W-AYDR170W-A BTN2P53286 410 aa2.91□□□□□ -1.94
YDR170W-AYDR170W-A MTM1P53320 366 aa2.91□□□□□ -1.94
YDR170W-AYDR170W-A RTT102P53330 157 aa2.91□□□□□ -1.94
YDR170W-AYDR170W-A RNH203Q12338 110 aa2.91□□□□□ -1.94
YDR170W-AYDR170W-A CEX1Q12453 761 aa2.91□□□□□ -1.94
YDR170W-AYDR170W-A CYC3P06182 269 aa2.9□□□□□ -1.95
YDR170W-AYDR170W-A RPS8AP0CX39 200 aaKnown RBP2.9□□□□□ -1.95
YDR170W-AYDR170W-A RPS8BP0CX40 200 aaKnown RBP2.9□□□□□ -1.95
YDR170W-AYDR170W-A DAL2P25335 343 aa2.9□□□□□ -1.95
YDR170W-AYDR170W-A MNS1P32906 549 aa2.9□□□□□ -1.95
YDR170W-AYDR170W-A MNL1P38888 796 aa2.9□□□□□ -1.95
YDR170W-AYDR170W-A MMF1P40185 145 aaKnown RBP2.9□□□□□ -1.95
YDR170W-AYDR170W-A JLP2P40206 208 aa2.9□□□□□ -1.95
YDR170W-AYDR170W-A SIM1P40472 476 aa2.9□□□□□ -1.95
YDR170W-AYDR170W-A CWC25P53854 179 aaKnown RBP2.9□□□□□ -1.95
YDR170W-AYDR170W-A URC2Q04411 772 aa2.9□□□□□ -1.95
YDR170W-AYDR170W-A HRI1Q05905 244 aaKnown RBP2.9□□□□□ -1.95
YDR170W-AYDR170W-A DBP9Q06218 594 aaKnown RBP2.9□□□□□ -1.95
YDR170W-AYDR170W-A NOP6Q07623 225 aaKnown RBP2.9□□□□□ -1.95
YDR170W-AYDR170W-A AAD15Q08361 143 aa2.9□□□□□ -1.95
YDR170W-AYDR170W-A YRM1Q12340 786 aa2.9□□□□□ -1.95
YDR170W-AYDR170W-A RPL12AP0CX53 165 aaKnown RBP2.89□□□□□ -1.95
YDR170W-AYDR170W-A RPL12BP0CX54 165 aa2.89□□□□□ -1.95
YDR170W-AYDR170W-A VMA2P16140 517 aaKnown RBP2.89□□□□□ -1.95
YDR170W-AYDR170W-A PET123P17558 318 aa2.89□□□□□ -1.95
YDR170W-AYDR170W-A UBA1P22515 1024 aaKnown RBP2.89□□□□□ -1.95
YDR170W-AYDR170W-A YCL068CP25593 260 aa2.89□□□□□ -1.95
YDR170W-AYDR170W-A YEL043WP32618 956 aa2.89□□□□□ -1.95
YDR170W-AYDR170W-A CHK1P38147 527 aa2.89□□□□□ -1.95
YDR170W-AYDR170W-A MSG5P38590 489 aa2.89□□□□□ -1.95
YDR170W-AYDR170W-A PAN6P40459 309 aa2.89□□□□□ -1.95
YDR170W-AYDR170W-A FYV8P46949 817 aaKnown RBP2.89□□□□□ -1.95
YDR170W-AYDR170W-A STE24P47154 453 aa2.89□□□□□ -1.95
YDR170W-AYDR170W-A RAX1Q08760 435 aa2.89□□□□□ -1.95
YDR170W-AYDR170W-A NBL1Q3E7Y6 73 aa2.89□□□□□ -1.95
YDR170W-AYDR170W-A SUP35P05453 685 aaKnown RBP2.88□□□□□ -1.95
YDR170W-AYDR170W-A ARF1P11076 181 aaKnown RBP2.88□□□□□ -1.95
YDR170W-AYDR170W-A CLN3P13365 580 aa2.88□□□□□ -1.95
YDR170W-AYDR170W-A SLM5P25345 492 aaKnown RBP2.88□□□□□ -1.95
YDR170W-AYDR170W-A SWD3P38123 315 aa2.88□□□□□ -1.95
YDR170W-AYDR170W-A YBL028CP38202 106 aa2.88□□□□□ -1.95
YDR170W-AYDR170W-A TOS3P43637 560 aa2.88□□□□□ -1.95
YDR170W-AYDR170W-A RPA34P47006 233 aaPredicted RBP2.88□□□□□ -1.95
YDR170W-AYDR170W-A PMT5P52867 743 aa2.88□□□□□ -1.95
YDR170W-AYDR170W-A YNR068CP53754 272 aa2.88□□□□□ -1.95
YDR170W-AYDR170W-A CCE1Q03702 353 aa2.88□□□□□ -1.95
YDR170W-AYDR170W-A ECM7Q06200 448 aa2.88□□□□□ -1.95
YDR170W-AYDR170W-A RRG7Q08774 242 aaPredicted RBP2.88□□□□□ -1.95
YDR170W-AYDR170W-A NCA2Q12374 616 aa2.88□□□□□ -1.95
YDR170W-AYDR170W-A ADH2P00331 348 aaKnown RBP2.87□□□□□ -1.95
YDR170W-AYDR170W-A OPI3P05375 206 aa2.87□□□□□ -1.95
YDR170W-AYDR170W-A ATP1P07251 545 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms