RNA–Protein interactions for RNA: YDL115C

IWR1, Transcript of RNA polymerase II transport factor, conserved from yeast to humans, yeast

Gene IWR1, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IWR1	YDL115C	THO1	P40040	218 aa	Known RBP	4.85	□□□□□ -1.63
IWR1	YDL115C	GAB1	P41733	394 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	QRI1	P43123	477 aa	Known RBP	4.85	□□□□□ -1.63
IWR1	YDL115C	AIM22	P47051	409 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	TIS11	P47977	285 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	NBP35	P52920	328 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	COS12	P53053	380 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	SDT1	P53078	280 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	YVH1	Q02256	364 aa	Known RBP	4.85	□□□□□ -1.63
IWR1	YDL115C	RPC11	Q04307	110 aa	Predicted RBP	4.85	□□□□□ -1.63
IWR1	YDL115C	ASA1	Q06822	443 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	YPL245W	Q12179	454 aa	Known RBP	4.85	□□□□□ -1.63
IWR1	YDL115C	PSY3	Q12318	242 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	Q0010	Q9ZZX9	128 aa		4.85	□□□□□ -1.63
IWR1	YDL115C	UBR1	P19812	1950 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	KAR1	P11927	433 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	CMK2	P22517	447 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	SPB1	P25582	841 aa	Predicted RBP	4.84	□□□□□ -1.63
IWR1	YDL115C	HXT4	P32467	576 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	DPH5	P32469	300 aa	Predicted RBP	4.84	□□□□□ -1.63
IWR1	YDL115C	MTH1	P35198	433 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	NTR2	P36118	322 aa	Predicted RBP	4.84	□□□□□ -1.63
IWR1	YDL115C	PDX3	P38075	228 aa	Known RBP	4.84	□□□□□ -1.63
IWR1	YDL115C	YBR241C	P38142	488 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	TRM7	P38238	310 aa	Known RBP	4.84	□□□□□ -1.63
IWR1	YDL115C	FAD1	P38913	306 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	HXT6	P39003	570 aa	Known RBP	4.84	□□□□□ -1.63
IWR1	YDL115C	HXT7	P39004	570 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	RBG1	P39729	369 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	PDS1	P40316	373 aa	Predicted RBP	4.84	□□□□□ -1.63
IWR1	YDL115C	MAD2	P40958	196 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	NOP9	P47077	666 aa	Known RBP	4.84	□□□□□ -1.63
IWR1	YDL115C	BNA2	P47125	453 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	YNR068C	P53754	272 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	YPL071C	Q02864	156 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	YPL113C	Q02961	396 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	YKU80	Q04437	629 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	ATG17	Q06410	417 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	IRC13	Q08630	104 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	VIK1	Q12045	647 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	SUL2	Q12325	893 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	JLP1	Q12358	412 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	SEC39	Q12745	709 aa		4.84	□□□□□ -1.63
IWR1	YDL115C	COX3	P00420	269 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	ARG81	P05085	880 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	GPH1	P06738	902 aa	Known RBP	4.83	□□□□□ -1.64
IWR1	YDL115C	TUB1	P09733	447 aa	Known RBP	4.83	□□□□□ -1.64
IWR1	YDL115C	ATR1	P13090	542 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	HOM2	P13663	365 aa	Known RBP	4.83	□□□□□ -1.64
IWR1	YDL115C	RED1	P14291	827 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	MRPS28	P21771	286 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	NUP2	P32499	720 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	UGP1	P32861	499 aa	Known RBP	4.83	□□□□□ -1.64
IWR1	YDL115C	SPC34	P36131	295 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	YHR218W	P38899	603 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	SNL1	P40548	159 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	NPY1	P53164	384 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	YGR250C	P53316	781 aa	Known RBP	4.83	□□□□□ -1.64
IWR1	YDL115C	TEX1	P53851	422 aa	Known RBP	4.83	□□□□□ -1.64
IWR1	YDL115C	MPS1	P54199	764 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	SKI8	Q02793	397 aa	Predicted RBP	4.83	□□□□□ -1.64
IWR1	YDL115C	HOT1	Q03213	719 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	VPS74	Q06385	345 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	ATG33	Q06485	197 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
IWR1	YDL115C	RSA1	Q08932	381 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	SAM4	Q08985	325 aa	Known RBP	4.83	□□□□□ -1.64
IWR1	YDL115C	PFK27	Q12471	397 aa	Predicted RBP	4.83	□□□□□ -1.64
IWR1	YDL115C	SNF8	Q12483	233 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	NKP1	Q12493	238 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	MHT1	Q12525	324 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	MHF2	Q3E829	80 aa		4.83	□□□□□ -1.64
IWR1	YDL115C	MEX67	Q99257	599 aa	Known RBP	4.83	□□□□□ -1.64
IWR1	YDL115C	RAD7	P06779	565 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	TY2A-LR1	P0C2J4	438 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	TY2A-F	P0CX61	438 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	TY2A-GR2	P0CX62	438 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	UNG1	P12887	359 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	CBS2	P14905	389 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	UGA1	P17649	471 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	DBP3	P20447	523 aa	Known RBP	4.82	□□□□□ -1.64
IWR1	YDL115C	FAR1	P21268	830 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	YSR3	P23501	404 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	TY2A-C	P25383	438 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	DMC1	P25453	334 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	YJU2	P28320	278 aa	Predicted RBP	4.82	□□□□□ -1.64
IWR1	YDL115C	VPH2	P32341	215 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	PET309	P32522	965 aa	Predicted RBP	4.82	□□□□□ -1.64
IWR1	YDL115C	TFB1	P32776	642 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	MGM101	P32787	269 aa	Known RBP	4.82	□□□□□ -1.64
IWR1	YDL115C	SSO1	P32867	290 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	HIS7	P33734	552 aa	Known RBP	4.82	□□□□□ -1.64
IWR1	YDL115C	SPO23	P33757	523 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	APT2	P36973	181 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	SOL2	P37262	315 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	SLM4	P38247	162 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	DED81	P38707	554 aa	Known RBP	4.82	□□□□□ -1.64
IWR1	YDL115C	AXL2	P38928	823 aa		4.82	□□□□□ -1.64
IWR1	YDL115C	MNN9	P39107	395 aa	Known RBP	4.82	□□□□□ -1.64
IWR1	YDL115C	ECM10	P39987	644 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms