RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W FYV6P53913 173 aa4.43□□□□□ -1.7
KIN28YDL108W ADE16P54113 591 aaKnown RBP4.43□□□□□ -1.7
KIN28YDL108W EBS1Q03466 884 aaKnown RBP4.43□□□□□ -1.7
KIN28YDL108W HRD3Q05787 833 aa4.43□□□□□ -1.7
KIN28YDL108W RRG8Q06109 277 aa4.43□□□□□ -1.7
KIN28YDL108W MRI1Q06489 411 aaKnown RBP4.43□□□□□ -1.7
KIN28YDL108W RDR1Q08904 546 aa4.43□□□□□ -1.7
KIN28YDL108W GPM2Q12008 311 aa4.43□□□□□ -1.7
KIN28YDL108W SET6Q12529 373 aa4.43□□□□□ -1.7
KIN28YDL108W COX1P00401 534 aa4.42□□□□□ -1.7
KIN28YDL108W RAD3P06839 778 aa4.42□□□□□ -1.7
KIN28YDL108W ILV2P07342 687 aaKnown RBP4.42□□□□□ -1.7
KIN28YDL108W RPL35AP0CX84 120 aaKnown RBP4.42□□□□□ -1.7
KIN28YDL108W RPL35BP0CX85 120 aaKnown RBP4.42□□□□□ -1.7
KIN28YDL108W ERG11P10614 530 aa4.42□□□□□ -1.7
KIN28YDL108W SNA3P14359 133 aa4.42□□□□□ -1.7
KIN28YDL108W SPO7P18410 259 aa4.42□□□□□ -1.7
KIN28YDL108W STE18P18852 110 aa4.42□□□□□ -1.7
KIN28YDL108W SAG1P20840 650 aa4.42□□□□□ -1.7
KIN28YDL108W CIN8P27895 1000 aa4.42□□□□□ -1.7
KIN28YDL108W LAC1P28496 418 aa4.42□□□□□ -1.7
KIN28YDL108W VPH2P32341 215 aa4.42□□□□□ -1.7
KIN28YDL108W SPS19P32573 292 aaKnown RBP4.42□□□□□ -1.7
KIN28YDL108W RAD23P32628 398 aaKnown RBP4.42□□□□□ -1.7
KIN28YDL108W SKG6P32900 734 aaPredicted RBP4.42□□□□□ -1.7
KIN28YDL108W SPO23P33757 523 aa4.42□□□□□ -1.7
KIN28YDL108W DOA1P36037 715 aa4.42□□□□□ -1.7
KIN28YDL108W VBA2P38358 474 aaKnown RBP4.42□□□□□ -1.7
KIN28YDL108W SSN2P38931 1420 aa4.42□□□□□ -1.7
KIN28YDL108W CIN1P40987 1014 aa4.42□□□□□ -1.7
KIN28YDL108W RIB4P50861 169 aaPredicted RBP4.42□□□□□ -1.7
KIN28YDL108W MRPL50P53724 139 aa4.42□□□□□ -1.7
KIN28YDL108W DBP6P53734 629 aaKnown RBP4.42□□□□□ -1.7
KIN28YDL108W YMR130WQ04223 302 aa4.42□□□□□ -1.7
KIN28YDL108W EMI2Q04409 500 aaKnown RBP4.42□□□□□ -1.7
KIN28YDL108W YPR078CQ06813 372 aa4.42□□□□□ -1.7
KIN28YDL108W OSW1Q08692 278 aa4.42□□□□□ -1.7
KIN28YDL108W GPN2Q08726 347 aaPredicted RBP4.42□□□□□ -1.7
KIN28YDL108W MUM3Q08750 479 aa4.42□□□□□ -1.7
KIN28YDL108W ATG31Q12421 196 aa4.42□□□□□ -1.7
KIN28YDL108W Q0010Q9ZZX9 128 aa4.42□□□□□ -1.7
KIN28YDL108W MDS3P53094 1487 aa4.42□□□□□ -1.7
KIN28YDL108W TOP2P06786 1428 aaKnown RBP4.41□□□□□ -1.7
KIN28YDL108W REV1P12689 985 aa4.41□□□□□ -1.7
KIN28YDL108W POL30P15873 258 aaKnown RBP4.41□□□□□ -1.7
KIN28YDL108W URA4P20051 364 aa4.41□□□□□ -1.7
KIN28YDL108W CTR86P25355 563 aa4.41□□□□□ -1.7
KIN28YDL108W LRE1P25579 583 aaKnown RBP4.41□□□□□ -1.7
KIN28YDL108W GSY2P27472 705 aa4.41□□□□□ -1.7
KIN28YDL108W NAM9P27929 486 aa4.41□□□□□ -1.7
KIN28YDL108W PRP18P33411 251 aaPredicted RBP4.41□□□□□ -1.7
KIN28YDL108W PAD1P33751 242 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
KIN28YDL108W TUL1P36096 758 aa4.41□□□□□ -1.7
KIN28YDL108W MMS21P38632 267 aa4.41□□□□□ -1.7
KIN28YDL108W SEO1P39709 593 aa4.41□□□□□ -1.7
KIN28YDL108W VAB2P40003 282 aa4.41□□□□□ -1.7
KIN28YDL108W GOR1P53839 350 aa4.41□□□□□ -1.7
KIN28YDL108W NUP116Q02630 1113 aa4.41□□□□□ -1.7
KIN28YDL108W CTF19Q02732 369 aa4.41□□□□□ -1.7
KIN28YDL108W ACL4Q03771 387 aa4.41□□□□□ -1.7
KIN28YDL108W YDR109CQ04585 715 aa4.41□□□□□ -1.7
KIN28YDL108W STE23Q06010 1027 aa4.41□□□□□ -1.7
KIN28YDL108W MRPL35Q06678 367 aa4.41□□□□□ -1.7
KIN28YDL108W PAM18Q07914 168 aa4.41□□□□□ -1.7
KIN28YDL108W YOR029WQ12243 111 aa4.41□□□□□ -1.7
KIN28YDL108W RDL1Q12305 139 aaKnown RBP4.41□□□□□ -1.7
KIN28YDL108W NDJ1Q12366 352 aa4.41□□□□□ -1.7
KIN28YDL108W SPE4Q12455 300 aa4.41□□□□□ -1.7
KIN28YDL108W RHO1P06780 209 aaKnown RBP4.4□□□□□ -1.71
KIN28YDL108W CDC33P07260 213 aaKnown RBP4.4□□□□□ -1.71
KIN28YDL108W PPH22P23595 377 aa4.4□□□□□ -1.71
KIN28YDL108W DBR1P24309 405 aaKnown RBP4.4□□□□□ -1.71
KIN28YDL108W DAL2P25335 343 aa4.4□□□□□ -1.71
KIN28YDL108W PEX3P28795 441 aa4.4□□□□□ -1.71
KIN28YDL108W HXT3P32466 567 aaKnown RBP4.4□□□□□ -1.71
KIN28YDL108W RML2P32611 393 aa4.4□□□□□ -1.71
KIN28YDL108W RAD24P32641 659 aa4.4□□□□□ -1.71
KIN28YDL108W ECT1P33412 323 aa4.4□□□□□ -1.71
KIN28YDL108W CBT1P36038 271 aaPredicted RBP4.4□□□□□ -1.71
KIN28YDL108W HMT1P38074 348 aa4.4□□□□□ -1.71
KIN28YDL108W FES1P38260 290 aa4.4□□□□□ -1.71
KIN28YDL108W SSH1P38353 490 aaKnown RBP4.4□□□□□ -1.71
KIN28YDL108W ERG7P38604 731 aa4.4□□□□□ -1.71
KIN28YDL108W FRT2P39734 528 aa4.4□□□□□ -1.71
KIN28YDL108W RPH1P39956 796 aa4.4□□□□□ -1.71
KIN28YDL108W YER137CP40083 148 aaKnown RBP4.4□□□□□ -1.71
KIN28YDL108W JLP2P40206 208 aa4.4□□□□□ -1.71
KIN28YDL108W ATM1P40416 690 aa4.4□□□□□ -1.71
KIN28YDL108W PCI8P40512 444 aa4.4□□□□□ -1.71
KIN28YDL108W YPT11P48559 417 aa4.4□□□□□ -1.71
KIN28YDL108W NSA1P53136 463 aaPredicted RBP4.4□□□□□ -1.71
KIN28YDL108W ATP23P53722 227 aa4.4□□□□□ -1.71
KIN28YDL108W CSL4P53859 292 aaPredicted RBP4.4□□□□□ -1.71
KIN28YDL108W EAF7P53911 425 aaKnown RBP4.4□□□□□ -1.71
KIN28YDL108W YAT1P80235 687 aa4.4□□□□□ -1.71
KIN28YDL108W LGE1Q02796 332 aaKnown RBP4.4□□□□□ -1.71
KIN28YDL108W FIN1Q03898 291 aa4.4□□□□□ -1.71
KIN28YDL108W COX20Q04935 205 aa4.4□□□□□ -1.71
KIN28YDL108W DYN3Q04949 312 aa4.4□□□□□ -1.71
KIN28YDL108W YLR283WQ05867 314 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 71.7 ms