RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	EXG1	P23776	448 aa	Known RBP	2.62	□□□□□ -1.99
PBP4	YDL053C	PCL1	P24867	279 aa		2.62	□□□□□ -1.99
PBP4	YDL053C	PRS1	P32895	427 aa	Known RBP	2.62	□□□□□ -1.99
PBP4	YDL053C	OLA1	P38219	394 aa	Known RBP	2.62	□□□□□ -1.99
PBP4	YDL053C	STP2	P38704	541 aa		2.62	□□□□□ -1.99
PBP4	YDL053C	FAD1	P38913	306 aa		2.62	□□□□□ -1.99
PBP4	YDL053C	STN1	P38960	494 aa		2.62	□□□□□ -1.99
PBP4	YDL053C	UTP18	P40362	594 aa	Predicted RBP	2.62	□□□□□ -1.99
PBP4	YDL053C	MRM2	P53123	320 aa		2.62	□□□□□ -1.99
PBP4	YDL053C	YGR111W	P53265	400 aa		2.62	□□□□□ -1.99
PBP4	YDL053C	TSA2	Q04120	196 aa		2.62	□□□□□ -1.99
PBP4	YDL053C	YLR456W	Q06199	204 aa		2.62	□□□□□ -1.99
PBP4	YDL053C	NDE2	Q07500	545 aa		2.62	□□□□□ -1.99
PBP4	YDL053C	CUE5	Q08412	411 aa	Known RBP	2.62	□□□□□ -1.99
PBP4	YDL053C	UAF30	Q08747	228 aa		2.62	□□□□□ -1.99
PBP4	YDL053C	PLP2	Q12017	286 aa		2.62	□□□□□ -1.99
PBP4	YDL053C	RUP1	Q12242	671 aa		2.62	□□□□□ -1.99
PBP4	YDL053C	DST1	P07273	309 aa		2.61	□□□□□ -1.99
PBP4	YDL053C	CAP2	P13517	287 aa		2.61	□□□□□ -1.99
PBP4	YDL053C	DPH5	P32469	300 aa	Predicted RBP	2.61	□□□□□ -1.99
PBP4	YDL053C	NUP2	P32499	720 aa		2.61	□□□□□ -1.99
PBP4	YDL053C	UTH1	P36135	365 aa		2.61	□□□□□ -1.99
PBP4	YDL053C	YER079W	P40052	210 aa	Known RBP	2.61	□□□□□ -1.99
PBP4	YDL053C	TOS3	P43637	560 aa		2.61	□□□□□ -1.99
PBP4	YDL053C	HAL1	Q01766	294 aa		2.61	□□□□□ -1.99
PBP4	YDL053C	ADA2	Q02336	434 aa		2.61	□□□□□ -1.99
PBP4	YDL053C	RIF2	Q06208	395 aa		2.61	□□□□□ -1.99
PBP4	YDL053C	MDM36	Q06820	579 aa		2.61	□□□□□ -1.99
PBP4	YDL053C	JID1	Q12350	301 aa		2.61	□□□□□ -1.99
PBP4	YDL053C	CDC21	P06785	304 aa		2.6	□□□□□ -1.99
PBP4	YDL053C	MSI1	P13712	422 aa		2.6	□□□□□ -1.99
PBP4	YDL053C	RIM1	P32445	135 aa	Known RBP	2.6	□□□□□ -1.99
PBP4	YDL053C	SRP72	P38688	640 aa	Known RBP	2.6	□□□□□ -1.99
PBP4	YDL053C	INM1	P38710	295 aa		2.6	□□□□□ -1.99
PBP4	YDL053C	GPI16	P38875	610 aa		2.6	□□□□□ -1.99
PBP4	YDL053C	MIG3	P39943	394 aa		2.6	□□□□□ -1.99
PBP4	YDL053C	LCB3	P47013	409 aa		2.6	□□□□□ -1.99
PBP4	YDL053C	COS1	P53822	381 aa		2.6	□□□□□ -1.99
PBP4	YDL053C	SMF3	Q12078	473 aa	Predicted RBP	2.6	□□□□□ -1.99
PBP4	YDL053C	YGK3	Q12222	375 aa	Predicted RBP	2.6	□□□□□ -1.99
PBP4	YDL053C	GPM3	Q12326	303 aa		2.6	□□□□□ -1.99
PBP4	YDL053C	CEX1	Q12453	761 aa		2.6	□□□□□ -1.99
PBP4	YDL053C	SMC6	Q12749	1114 aa		2.6	□□□□□ -1.99
PBP4	YDL053C	NAT1	P12945	854 aa	Known RBP	2.59	□□□□□ -1.99
PBP4	YDL053C	HSP104	P31539	908 aa	Known RBP	2.59	□□□□□ -1.99
PBP4	YDL053C	VMA8	P32610	256 aa	Known RBP	2.59	□□□□□ -1.99
PBP4	YDL053C	SKN1	P33336	771 aa		2.59	□□□□□ -1.99
PBP4	YDL053C	LTV1	P34078	463 aa		2.59	□□□□□ -1.99
PBP4	YDL053C	RTC2	P38279	296 aa		2.59	□□□□□ -1.99
PBP4	YDL053C	MMF1	P40185	145 aa	Known RBP	2.59	□□□□□ -1.99
PBP4	YDL053C	BIR1	P47134	954 aa		2.59	□□□□□ -1.99
PBP4	YDL053C	PIB2	P53191	635 aa		2.59	□□□□□ -1.99
PBP4	YDL053C	RTN1	Q04947	295 aa	Known RBP	2.59	□□□□□ -1.99
PBP4	YDL053C	YDR341C	Q05506	607 aa	Known RBP	2.59	□□□□□ -1.99
PBP4	YDL053C	DCI1	Q08558	271 aa		2.59	□□□□□ -1.99
PBP4	YDL053C	EAF3	Q12432	401 aa		2.59	□□□□□ -1.99
PBP4	YDL053C	ATP1	P07251	545 aa	Known RBP	2.58	□□□□□ -2
PBP4	YDL053C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
PBP4	YDL053C	ALG1	P16661	449 aa		2.58	□□□□□ -2
PBP4	YDL053C	RPB5	P20434	215 aa		2.58	□□□□□ -2
PBP4	YDL053C	AAT2	P23542	418 aa	Known RBP	2.58	□□□□□ -2
PBP4	YDL053C	YHK8	P38776	514 aa		2.58	□□□□□ -2
PBP4	YDL053C	YFR057W	P43625	151 aa		2.58	□□□□□ -2
PBP4	YDL053C	AIM24	P47127	394 aa		2.58	□□□□□ -2
PBP4	YDL053C	BNS1	P50084	137 aa		2.58	□□□□□ -2
PBP4	YDL053C	MST27	P53176	234 aa		2.58	□□□□□ -2
PBP4	YDL053C	RRP46	P53256	223 aa	Predicted RBP	2.58	□□□□□ -2
PBP4	YDL053C	CIK1	Q01649	594 aa		2.58	□□□□□ -2
PBP4	YDL053C	YMR102C	Q03177	834 aa		2.58	□□□□□ -2
PBP4	YDL053C	TDA1	Q03533	586 aa		2.58	□□□□□ -2
PBP4	YDL053C	SMC5	Q08204	1093 aa		2.58	□□□□□ -2
PBP4	YDL053C	POM152	P39685	1337 aa		2.58	□□□□□ -2
PBP4	YDL053C	SSC1	P0CS90	654 aa	Known RBP	2.57	□□□□□ -2
PBP4	YDL053C	YEF1	P32622	495 aa		2.57	□□□□□ -2
PBP4	YDL053C	BAT1	P38891	393 aa	Known RBP	2.57	□□□□□ -2
PBP4	YDL053C	PTI1	P39927	425 aa	Predicted RBP	2.57	□□□□□ -2
PBP4	YDL053C	HAC1	P41546	238 aa		2.57	□□□□□ -2
PBP4	YDL053C	EGT2	P42835	1041 aa		2.57	□□□□□ -2
PBP4	YDL053C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	not detected
PBP4	YDL053C	YML6	P51998	286 aa		2.57	□□□□□ -2
PBP4	YDL053C	ROG1	P53118	685 aa		2.57	□□□□□ -2
PBP4	YDL053C	YGR117C	P53270	476 aa		2.57	□□□□□ -2
PBP4	YDL053C	GYL1	Q04322	720 aa		2.57	□□□□□ -2
PBP4	YDL053C	CMS1	Q07897	291 aa	Known RBP	2.57	□□□□□ -2
PBP4	YDL053C	NSE1	Q07913	336 aa		2.57	□□□□□ -2
PBP4	YDL053C	RNH203	Q12338	110 aa		2.57	□□□□□ -2
PBP4	YDL053C	PDE2	P06776	526 aa		2.56	□□□□□ -2
PBP4	YDL053C	PHO91	P27514	894 aa		2.56	□□□□□ -2
PBP4	YDL053C	PRR1	P28708	518 aa		2.56	□□□□□ -2
PBP4	YDL053C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	not detected
PBP4	YDL053C	COX13	P32799	129 aa		2.56	□□□□□ -2
PBP4	YDL053C	SPT10	P35208	640 aa		2.56	□□□□□ -2
PBP4	YDL053C	QDR3	P38227	689 aa		2.56	□□□□□ -2
PBP4	YDL053C	OXA1	P39952	402 aa		2.56	□□□□□ -2
PBP4	YDL053C	MAM33	P40513	266 aa		2.56	□□□□□ -2
PBP4	YDL053C	DFG10	P40526	253 aa		2.56	□□□□□ -2
PBP4	YDL053C	ATG18	P43601	500 aa		2.56	□□□□□ -2
PBP4	YDL053C	STE24	P47154	453 aa		2.56	□□□□□ -2
PBP4	YDL053C	TOS2	P50078	622 aa		2.56	□□□□□ -2
PBP4	YDL053C	CRH1	P53301	507 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms