RNA–Protein interactions for RNA: YDL030W

PRP9, Transcript of Subunit of the SF3a splicing factor complex, yeast

Gene PRP9, Length 1,593 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP9	YDL030W	UIP5	P36137	443 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	HIS2	P38635	335 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	YJR054W	P47114	497 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	DUO1	P53168	247 aa	Known RBP	4.1	□□□□□ -1.75
PRP9	YDL030W	YGR016W	P53209	190 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	SNZ1	Q03148	297 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	DYN3	Q04949	312 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	YDL057W	Q07379	328 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	UIP4	Q08926	304 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	SET6	Q12529	373 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	TEF1	P02994	458 aa	Known RBP	4.1	□□□□□ -1.75
PRP9	YDL030W	RPS3	P05750	240 aa	Known RBP	4.1	□□□□□ -1.75
PRP9	YDL030W	CMD1	P06787	147 aa	Known RBP	4.1	□□□□□ -1.75
PRP9	YDL030W	ATR1	P13090	542 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	HEM15	P16622	393 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	CKA2	P19454	339 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	EXO70	P19658	623 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	CPR3	P25719	182 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	RPS5	P26783	225 aa	Known RBP	4.1	□□□□□ -1.75
PRP9	YDL030W	SMI1	P32566	505 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	MYO3	P36006	1272 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	RCN1	P36054	211 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	VMA22	P38784	181 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	END3	P39013	349 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	TOS3	P43637	560 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	LIA1	P47120	325 aa	Known RBP	4.1	□□□□□ -1.75
PRP9	YDL030W	USE1	P53146	245 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	DRN1	P53255	507 aa	Known RBP	4.1	□□□□□ -1.75
PRP9	YDL030W	BUD32	P53323	261 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	RET3	P53600	189 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	OSH6	Q02201	448 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	DCS1	Q06151	350 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	SEC10	Q06245	871 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	MDM36	Q06820	579 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	YRM1	Q12340	786 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	YIL002W-A	Q3E7Z5	69 aa		4.1	□□□□□ -1.75
PRP9	YDL030W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.09	□□□□□ -1.75
PRP9	YDL030W	SEM1	O94742	89 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	CAR1	P00812	333 aa	Known RBP	4.09	□□□□□ -1.75
PRP9	YDL030W	GDH1	P07262	454 aa	Known RBP	4.09	□□□□□ -1.75
PRP9	YDL030W	UBA1	P22515	1024 aa	Known RBP	4.09	□□□□□ -1.75
PRP9	YDL030W	SGV1	P23293	657 aa	Known RBP	4.09	□□□□□ -1.75
PRP9	YDL030W	VMA8	P32610	256 aa	Known RBP	4.09	□□□□□ -1.75
PRP9	YDL030W	TPO5	P36029	618 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	MRX3	P38172	270 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	VHC1	P38329	1120 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	MSG5	P38590	489 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	VPS52	P39904	641 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	RPH1	P39956	796 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	SNL1	P40548	159 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	MKT1	P40850	830 aa	Known RBP	4.09	□□□□□ -1.75
PRP9	YDL030W	YJL213W	P40896	331 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	APS3	P47064	194 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	SRB7	P47822	140 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	YDL186W	P48568	277 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	FYV6	P53913	173 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	MMT1	Q03218	510 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	YDR239C	Q03780	787 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	YMR027W	Q04371	470 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	ERP1	Q05359	219 aa	Known RBP	4.09	□□□□□ -1.75
PRP9	YDL030W	SMD2	Q06217	110 aa	Known RBP	4.09	□□□□□ -1.75
PRP9	YDL030W	BCP1	Q06338	283 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	YDL114W	Q07530	308 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	SMC5	Q08204	1093 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	SNX3	Q08826	162 aa	Known RBP	4.09	□□□□□ -1.75
PRP9	YDL030W	RAD61	Q99359	647 aa		4.09	□□□□□ -1.75
PRP9	YDL030W	MSS116	P15424	664 aa	Known RBP	4.08	□□□□□ -1.76
PRP9	YDL030W	MER1	P16523	270 aa		4.08	□□□□□ -1.76
PRP9	YDL030W	ART10	P18634	518 aa	Known RBP	4.08	□□□□□ -1.76
PRP9	YDL030W	ISY1	P21374	235 aa	Predicted RBP	4.08	□□□□□ -1.76
PRP9	YDL030W	OCA4	P25366	362 aa		4.08	□□□□□ -1.76
PRP9	YDL030W	ATS1	P31386	333 aa		4.08	□□□□□ -1.76
PRP9	YDL030W	RPT5	P33297	434 aa	Known RBP	4.08	□□□□□ -1.76
PRP9	YDL030W	RSM22	P36056	628 aa		4.08	□□□□□ -1.76
PRP9	YDL030W	ATP3	P38077	311 aa	Known RBP	4.08	□□□□□ -1.76
PRP9	YDL030W	SLM4	P38247	162 aa		4.08	□□□□□ -1.76
PRP9	YDL030W	RRT2	P38332	387 aa		4.08	□□□□□ -1.76
PRP9	YDL030W	YHR218W	P38899	603 aa		4.08	□□□□□ -1.76
PRP9	YDL030W	STN1	P38960	494 aa		4.08	□□□□□ -1.76
PRP9	YDL030W	NPT1	P39683	429 aa	Known RBP	4.08	□□□□□ -1.76
PRP9	YDL030W	FRT2	P39734	528 aa		4.08	□□□□□ -1.76
PRP9	YDL030W	YJL055W	P47044	245 aa		4.08	□□□□□ -1.76
PRP9	YDL030W	COS5	P47187	383 aa		4.08	□□□□□ -1.76
PRP9	YDL030W	SSN8	P47821	323 aa		4.08	□□□□□ -1.76
PRP9	YDL030W	MYO5	Q04439	1219 aa	Known RBP	4.08	□□□□□ -1.76
PRP9	YDL030W	YLR031W	Q07978	186 aa		4.08	□□□□□ -1.76
PRP9	YDL030W	RPN8	Q08723	338 aa	Known RBP	4.08	□□□□□ -1.76
PRP9	YDL030W	NCE102	Q12207	173 aa	RIP-Chip data	4.08	□□□□□ -1.76	not detected
PRP9	YDL030W	MED4	Q12343	284 aa		4.08	□□□□□ -1.76
PRP9	YDL030W	RRP36	Q12481	300 aa	Predicted RBP	4.08	□□□□□ -1.76
PRP9	YDL030W	RPL6B	P05739	176 aa	Known RBP	4.07	□□□□□ -1.76
PRP9	YDL030W	CBF1	P17106	351 aa		4.07	□□□□□ -1.76
PRP9	YDL030W	EST1	P17214	699 aa	Predicted RBP	4.07	□□□□□ -1.76
PRP9	YDL030W	STP2	P38704	541 aa		4.07	□□□□□ -1.76
PRP9	YDL030W	TRM5	P38793	499 aa		4.07	□□□□□ -1.76
PRP9	YDL030W	YHR210C	P38893	341 aa		4.07	□□□□□ -1.76
PRP9	YDL030W	RPR2	P40571	144 aa		4.07	□□□□□ -1.76
PRP9	YDL030W	YJR154W	P47181	346 aa		4.07	□□□□□ -1.76
PRP9	YDL030W	TRF5	P48561	642 aa	Known RBP	4.07	□□□□□ -1.76
PRP9	YDL030W	EFM5	P53200	248 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms